FFCP PHASE1:Hg19::chr5:161494723..161494732,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2566 | |EntrezGene=2566 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4087 | |HGNC=4087 | ||
|TSSclassifier=strong | |||
|UniProt=F5HB82 | |UniProt=F5HB82 | ||
|association_with_transcript=-48bp_to_ENST00000414552_5end | |association_with_transcript=-48bp_to_ENST00000414552_5end | ||
|cluster_id=chr5:161494723..161494732,+ | |||
|coexpression_cluster_id=C247 | |coexpression_cluster_id=C247 | ||
|description=CAGE_peak_15_at_GABRG2_5end | |description=CAGE_peak_15_at_GABRG2_5end | ||
|id=chr5:161494723..161494732,+ | |id=chr5:161494723..161494732,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.46e-89!57;UBERON:0005068!6.46e-89!57;UBERON:0006241!6.46e-89!57;UBERON:0007135!6.46e-89!57;UBERON:0002780!2.32e-82!41;UBERON:0001890!2.32e-82!41;UBERON:0006240!2.32e-82!41;UBERON:0002616!2.54e-80!59;UBERON:0003080!2.61e-80!42;UBERON:0001950!5.57e-75!20;UBERON:0002020!6.93e-72!34;UBERON:0003528!6.93e-72!34;UBERON:0001017!1.23e-71!82;UBERON:0001893!1.55e-71!34;UBERON:0000955!1.57e-71!69;UBERON:0006238!1.57e-71!69;UBERON:0001869!9.45e-70!32;UBERON:0002619!4.17e-68!22;UBERON:0005743!4.56e-68!86;UBERON:0002791!1.65e-67!33;UBERON:0003075!9.52e-65!86;UBERON:0007284!9.52e-65!86;UBERON:0000073!9.68e-65!94;UBERON:0001016!9.68e-65!94;UBERON:0002346!1.33e-61!90;UBERON:0000956!8.93e-60!25;UBERON:0000203!8.93e-60!25;UBERON:0003056!6.82e-54!61;UBERON:0007023!9.93e-39!115;UBERON:0000033!9.73e-38!123;UBERON:0000153!1.06e-35!129;UBERON:0007811!1.06e-35!129;UBERON:0004121!1.84e-33!169;UBERON:0000924!1.54e-32!173;UBERON:0006601!1.54e-32!173;UBERON:0000200!4.75e-30!6;UBERON:0002021!3.12e-25!5;UBERON:0001871!4.89e-22!7;UBERON:0000025!1.03e-21!194;UBERON:0001872!4.48e-17!5;UBERON:0004111!3.63e-16!241;UBERON:0000988!4.41e-16!3;UBERON:0002771!5.41e-16!3;UBERON:0002298!7.25e-16!8;UBERON:0002308!7.92e-14!9;UBERON:0000125!7.92e-14!9;UBERON:0000483!3.89e-13!309;UBERON:0000119!6.08e-13!312;UBERON:0000477!1.49e-12!286;UBERON:0003296!3.44e-12!4;UBERON:0010133!3.44e-12!4;UBERON:0000369!5.03e-12!4;UBERON:0002435!5.03e-12!4;UBERON:0000204!5.03e-12!4;UBERON:0010082!5.03e-12!4;UBERON:0001894!5.57e-12!7;UBERON:0006222!5.57e-12!7;UBERON:0001870!7.35e-12!2;UBERON:0003076!9.53e-12!15;UBERON:0003057!9.53e-12!15;UBERON:0001905!1.31e-11!2;UBERON:0002757!1.31e-11!2;UBERON:0010134!1.31e-11!2;UBERON:0002784!1.31e-11!2;UBERON:0005408!1.31e-11!2;UBERON:0001899!1.31e-11!2;UBERON:0000064!5.70e-11!219;UBERON:0002148!6.13e-11!2;UBERON:0009662!6.13e-11!2;UBERON:0002360!6.78e-11!2;UBERON:0000094!6.78e-11!2;UBERON:0007645!6.78e-11!2;UBERON:0004733!1.70e-10!12;UBERON:0002028!1.70e-10!12;UBERON:0007277!1.70e-10!12;UBERON:0004732!1.15e-09!13;UBERON:0000475!3.70e-09!365;UBERON:0002420!3.78e-09!9;UBERON:0007245!3.78e-09!9;UBERON:0010009!3.78e-09!9;UBERON:0010011!3.78e-09!9;UBERON:0000454!3.78e-09!9;UBERON:0001896!9.88e-08!3;UBERON:0005290!9.88e-08!3;UBERON:0010096!9.88e-08!3;UBERON:0006331!1.43e-07!3;UBERON:0005383!1.63e-07!3;UBERON:0005382!1.63e-07!3;UBERON:0009663!4.64e-07!7;UBERON:0000481!8.32e-07!347;UBERON:0002702!8.81e-07!1 | |ontology_enrichment_uberon=UBERON:0001049!6.46e-89!57;UBERON:0005068!6.46e-89!57;UBERON:0006241!6.46e-89!57;UBERON:0007135!6.46e-89!57;UBERON:0002780!2.32e-82!41;UBERON:0001890!2.32e-82!41;UBERON:0006240!2.32e-82!41;UBERON:0002616!2.54e-80!59;UBERON:0003080!2.61e-80!42;UBERON:0001950!5.57e-75!20;UBERON:0002020!6.93e-72!34;UBERON:0003528!6.93e-72!34;UBERON:0001017!1.23e-71!82;UBERON:0001893!1.55e-71!34;UBERON:0000955!1.57e-71!69;UBERON:0006238!1.57e-71!69;UBERON:0001869!9.45e-70!32;UBERON:0002619!4.17e-68!22;UBERON:0005743!4.56e-68!86;UBERON:0002791!1.65e-67!33;UBERON:0003075!9.52e-65!86;UBERON:0007284!9.52e-65!86;UBERON:0000073!9.68e-65!94;UBERON:0001016!9.68e-65!94;UBERON:0002346!1.33e-61!90;UBERON:0000956!8.93e-60!25;UBERON:0000203!8.93e-60!25;UBERON:0003056!6.82e-54!61;UBERON:0007023!9.93e-39!115;UBERON:0000033!9.73e-38!123;UBERON:0000153!1.06e-35!129;UBERON:0007811!1.06e-35!129;UBERON:0004121!1.84e-33!169;UBERON:0000924!1.54e-32!173;UBERON:0006601!1.54e-32!173;UBERON:0000200!4.75e-30!6;UBERON:0002021!3.12e-25!5;UBERON:0001871!4.89e-22!7;UBERON:0000025!1.03e-21!194;UBERON:0001872!4.48e-17!5;UBERON:0004111!3.63e-16!241;UBERON:0000988!4.41e-16!3;UBERON:0002771!5.41e-16!3;UBERON:0002298!7.25e-16!8;UBERON:0002308!7.92e-14!9;UBERON:0000125!7.92e-14!9;UBERON:0000483!3.89e-13!309;UBERON:0000119!6.08e-13!312;UBERON:0000477!1.49e-12!286;UBERON:0003296!3.44e-12!4;UBERON:0010133!3.44e-12!4;UBERON:0000369!5.03e-12!4;UBERON:0002435!5.03e-12!4;UBERON:0000204!5.03e-12!4;UBERON:0010082!5.03e-12!4;UBERON:0001894!5.57e-12!7;UBERON:0006222!5.57e-12!7;UBERON:0001870!7.35e-12!2;UBERON:0003076!9.53e-12!15;UBERON:0003057!9.53e-12!15;UBERON:0001905!1.31e-11!2;UBERON:0002757!1.31e-11!2;UBERON:0010134!1.31e-11!2;UBERON:0002784!1.31e-11!2;UBERON:0005408!1.31e-11!2;UBERON:0001899!1.31e-11!2;UBERON:0000064!5.70e-11!219;UBERON:0002148!6.13e-11!2;UBERON:0009662!6.13e-11!2;UBERON:0002360!6.78e-11!2;UBERON:0000094!6.78e-11!2;UBERON:0007645!6.78e-11!2;UBERON:0004733!1.70e-10!12;UBERON:0002028!1.70e-10!12;UBERON:0007277!1.70e-10!12;UBERON:0004732!1.15e-09!13;UBERON:0000475!3.70e-09!365;UBERON:0002420!3.78e-09!9;UBERON:0007245!3.78e-09!9;UBERON:0010009!3.78e-09!9;UBERON:0010011!3.78e-09!9;UBERON:0000454!3.78e-09!9;UBERON:0001896!9.88e-08!3;UBERON:0005290!9.88e-08!3;UBERON:0010096!9.88e-08!3;UBERON:0006331!1.43e-07!3;UBERON:0005383!1.63e-07!3;UBERON:0005382!1.63e-07!3;UBERON:0009663!4.64e-07!7;UBERON:0000481!8.32e-07!347;UBERON:0002702!8.81e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000988;3.27e-23;3!UBERON:0001872;1.60e-14;5!UBERON:0002021;1.60e-14;5!UBERON:0001950;1.09e-13;20!UBERON:0002619;1.33e-12;22!UBERON:0002298;2.45e-12;6!UBERON:0000956;2.77e-11;25!UBERON:0000203;2.77e-11;25!UBERON:0000073;1.70e-09;53!UBERON:0002616;1.70e-09;53!UBERON:0001893;2.79e-09;34!UBERON:0002680;1.12e-08;9!UBERON:0001895;1.12e-08;9!UBERON:0002791;1.25e-08;32!UBERON:0001869;1.25e-08;32!UBERON:0003528;5.60e-08;34!UBERON:0002020;5.60e-08;34!UBERON:0002780;2.51e-07;41!UBERON:0001890;2.51e-07;41!UBERON:0001016;2.91e-07;83!UBERON:0004733;7.92e-07;12!UBERON:0002028;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,2.62e-23,3;UBERON:0002021,1.60e-14,5;UBERON:0001872,1.83e-14,5;UBERON:0001950,1.16e-13,20;UBERON:0002619,1.41e-12,22;UBERON:0002298,2.19e-12,6;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000956,2.91e-11,25;UBERON:0000203,2.91e-11,25;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002791,4.11e-09,32;UBERON:0001869,4.11e-09,32;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0003528,1.18e-08,34;UBERON:0002020,1.18e-08,34;UBERON:0001893,1.18e-08,34;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.17e-07,41;UBERON:0001890,2.17e-07,41;UBERON:0003080,2.17e-07,41;UBERON:0006240,2.17e-07,41;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12 | |||
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|short_description=p15@GABRG2 | |short_description=p15@GABRG2 | ||
}} | }} |
Latest revision as of 17:38, 16 September 2015
Short description: | p15@GABRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_GABRG2_5end |
Coexpression cluster: | C247_pons_locus_medulla_spinal_paracentral_medial_occipital |
Association with transcript: | -48bp_to_ENST00000414552_5end |
EntrezGene: | GABRG2 |
HGNC: | 4087 |
UniProt: | F5HB82 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pons | 2.62e-23 | 3 |
occipital lobe | 1.60e-14 | 5 |
parietal lobe | 1.83e-14 | 5 |
neocortex | 1.16e-13 | 20 |
regional part of cerebral cortex | 1.41e-12 | 22 |
brainstem | 2.19e-12 | 6 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
cerebral cortex | 2.91e-11 | 25 |
pallium | 2.91e-11 | 25 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
regional part of telencephalon | 4.11e-09 | 32 |
cerebral hemisphere | 4.11e-09 | 32 |
regional part of metencephalon | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
brain grey matter | 1.18e-08 | 34 |
gray matter | 1.18e-08 | 34 |
telencephalon | 1.18e-08 | 34 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
regional part of forebrain | 2.17e-07 | 41 |
forebrain | 2.17e-07 | 41 |
anterior neural tube | 2.17e-07 | 41 |
future forebrain | 2.17e-07 | 41 |
segmental subdivision of hindbrain | 7.48e-07 | 12 |
hindbrain | 7.48e-07 | 12 |
presumptive hindbrain | 7.48e-07 | 12 |