FFCP PHASE1:Hg19::chr11:131779544..131779557,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50863 | |EntrezGene=50863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17941 | |HGNC=17941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENST00000463395_5end | |association_with_transcript=-33bp_to_ENST00000463395_5end | ||
|cluster_id=chr11:131779544..131779557,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_21_at_NTM_5end | |description=CAGE_peak_21_at_NTM_5end | ||
|id=chr11:131779544..131779557,+ | |id=chr11:131779544..131779557,+ | ||
|ontology_enrichment_celltype=CL:0002582!2.58e-07!3;CL:0000064!3.15e-07!3;CL:0005012!3.15e-07!3;CL:0000067!3.15e-07!3;CL:0002304!3.15e-07!3 | |ontology_enrichment_celltype=CL:0002582!2.58e-07!3;CL:0000064!3.15e-07!3;CL:0005012!3.15e-07!3;CL:0000067!3.15e-07!3;CL:0002304!3.15e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000222;9.79e-26;1!CL:0000306;1.92e-07;4!CL:0002222;1.92e-07;4!CL:0002224;1.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.04e-07,4;CL:0002222,2.04e-07,4;CL:0002224,2.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.35e-75;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;5.22e-38;6!UBERON:0002680;1.22e-25;9!UBERON:0001895;1.22e-25;9!UBERON:0004733;1.93e-19;12!UBERON:0002028;1.93e-19;12!UBERON:0004732;5.26e-18;13!UBERON:0010077;1.92e-07;4!UBERON:0005389;1.92e-07;4!UBERON:0000484;1.92e-07;4!UBERON:0000965;1.92e-07;4!UBERON:0001803;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.56e-38,6;UBERON:0006215,5.56e-38,6;UBERON:0002680,1.27e-25,9;UBERON:0001895,1.27e-25,9;UBERON:0010092,1.27e-25,9;UBERON:0004733,2.00e-19,12;UBERON:0002028,2.00e-19,12;UBERON:0007277,2.00e-19,12;UBERON:0004732,5.41e-18,13;UBERON:0003076,1.07e-15,15;UBERON:0003057,1.07e-15,15;UBERON:0000073,8.31e-08,53;UBERON:0002616,8.31e-08,53;UBERON:0003075,1.06e-07,82;UBERON:0007284,1.06e-07,82;UBERON:0010077,2.04e-07,4;UBERON:0005389,2.04e-07,4;UBERON:0000484,2.04e-07,4;UBERON:0002546,2.04e-07,4;UBERON:0000965,2.04e-07,4;UBERON:0001803,2.04e-07,4;UBERON:0003073,2.04e-07,4;UBERON:0005426,2.04e-07,4;UBERON:0001049,2.05e-07,56;UBERON:0005068,2.05e-07,56;UBERON:0006241,2.05e-07,56;UBERON:0007135,2.05e-07,56;UBERON:0002346,2.36e-07,86;UBERON:0010314,8.63e-07,132 | |||
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| ||
|short_description=p21@NTM | |short_description=p21@NTM | ||
}} | }} |
Latest revision as of 19:00, 16 September 2015
Short description: | p21@NTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_NTM_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -33bp_to_ENST00000463395_5end |
EntrezGene: | NTM |
HGNC: | 17941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.04e-07 | 4 |
vertebrate lens cell | 2.04e-07 | 4 |
lens epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.56e-38 | 6 |
rhombic lip | 5.56e-38 | 6 |
regional part of metencephalon | 1.27e-25 | 9 |
metencephalon | 1.27e-25 | 9 |
future metencephalon | 1.27e-25 | 9 |
segmental subdivision of hindbrain | 2.00e-19 | 12 |
hindbrain | 2.00e-19 | 12 |
presumptive hindbrain | 2.00e-19 | 12 |
segmental subdivision of nervous system | 5.41e-18 | 13 |
posterior neural tube | 1.07e-15 | 15 |
chordal neural plate | 1.07e-15 | 15 |
regional part of nervous system | 8.31e-08 | 53 |
regional part of brain | 8.31e-08 | 53 |
neural plate | 1.06e-07 | 82 |
presumptive neural plate | 1.06e-07 | 82 |
cuboidal epithelium | 2.04e-07 | 4 |
transparent eye structure | 2.04e-07 | 4 |
simple cuboidal epithelium | 2.04e-07 | 4 |
cranial placode | 2.04e-07 | 4 |
lens of camera-type eye | 2.04e-07 | 4 |
epithelium of lens | 2.04e-07 | 4 |
lens placode | 2.04e-07 | 4 |
lens vesicle | 2.04e-07 | 4 |
neural tube | 2.05e-07 | 56 |
neural rod | 2.05e-07 | 56 |
future spinal cord | 2.05e-07 | 56 |
neural keel | 2.05e-07 | 56 |
neurectoderm | 2.36e-07 | 86 |
structure with developmental contribution from neural crest | 8.63e-07 | 132 |