FFCP PHASE1:Hg19::chr16:53469525..53469598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5934 | |EntrezGene=5934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9894 | |HGNC=9894 | ||
|TSSclassifier=strong | |||
|UniProt=F5H837 | |UniProt=F5H837 | ||
|association_with_transcript=0bp_to_ENST00000544405,uc010vgv.1_5end | |association_with_transcript=0bp_to_ENST00000544405,uc010vgv.1_5end | ||
|cluster_id=chr16:53469525..53469598,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_RBL2_5end | |description=CAGE_peak_2_at_RBL2_5end | ||
|id=chr16:53469525..53469598,+ | |id=chr16:53469525..53469598,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.29e-11!18;CL:0000789!1.29e-11!18;CL:0002420!1.29e-11!18;CL:0002419!1.29e-11!18;CL:0000790!1.29e-11!18;CL:0000625!1.04e-08!11;CL:0000084!2.83e-08!25;CL:0000827!2.83e-08!25;CL:0000838!6.20e-08!52;CL:0000542!1.79e-07!53;CL:0000051!1.79e-07!53 | |ontology_enrichment_celltype=CL:0000791!1.29e-11!18;CL:0000789!1.29e-11!18;CL:0002420!1.29e-11!18;CL:0002419!1.29e-11!18;CL:0000790!1.29e-11!18;CL:0000625!1.04e-08!11;CL:0000084!2.83e-08!25;CL:0000827!2.83e-08!25;CL:0000838!6.20e-08!52;CL:0000542!1.79e-07!53;CL:0000051!1.79e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.61e-16;18!CL:0000789;1.61e-16;18!CL:0002419;1.61e-16;18!CL:0000625;1.43e-12;11!CL:0000084;3.81e-11;25!CL:0000094;1.19e-07;8!CL:0000624;5.99e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.82e-16,18;CL:0000789,1.82e-16,18;CL:0002420,1.82e-16,18;CL:0002419,1.82e-16,18;CL:0000790,1.82e-16,18;CL:0000625,1.64e-12,11;CL:0000084,3.14e-11,25;CL:0000827,3.14e-11,25;CL:0000838,2.43e-08,52;CL:0000542,5.08e-08,53;CL:0000051,5.08e-08,53;CL:0000094,2.20e-07,8;CL:0000624,5.96e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.61e-16;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.19e-39!115;UBERON:0001049!1.71e-13!57;UBERON:0005068!1.71e-13!57;UBERON:0006241!1.71e-13!57;UBERON:0007135!1.71e-13!57;UBERON:0002616!4.14e-11!59;UBERON:0003080!6.01e-11!42;UBERON:0002780!1.15e-10!41;UBERON:0001890!1.15e-10!41;UBERON:0006240!1.15e-10!41;UBERON:0000955!2.33e-09!69;UBERON:0006238!2.33e-09!69;UBERON:0003075!5.09e-08!86;UBERON:0007284!5.09e-08!86;UBERON:0001017!6.35e-08!82;UBERON:0002020!1.03e-07!34;UBERON:0003528!1.03e-07!34;UBERON:0001893!1.22e-07!34;UBERON:0005743!1.73e-07!86;UBERON:0002791!2.45e-07!33;UBERON:0000178!9.43e-07!15;UBERON:0000179!9.43e-07!15;UBERON:0000463!9.43e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.74e-11;114!UBERON:0002780;1.02e-10;41!UBERON:0001890;1.02e-10;41!UBERON:0000073;1.66e-09;53!UBERON:0002616;1.66e-09;53!UBERON:0003528;5.80e-09;34!UBERON:0002020;5.80e-09;34!UBERON:0001893;6.99e-09;34!UBERON:0000178;1.36e-08;15!UBERON:0000179;1.36e-08;15!UBERON:0000463;1.36e-08;15!UBERON:0002791;1.71e-08;32!UBERON:0001869;3.33e-08;32!UBERON:0002619;7.26e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.57e-44,114;UBERON:0001049,3.52e-19,56;UBERON:0005068,3.52e-19,56;UBERON:0006241,3.52e-19,56;UBERON:0007135,3.52e-19,56;UBERON:0000073,2.95e-17,53;UBERON:0002616,2.95e-17,53;UBERON:0002780,8.96e-16,41;UBERON:0001890,8.96e-16,41;UBERON:0003080,8.96e-16,41;UBERON:0006240,8.96e-16,41;UBERON:0003075,1.37e-11,82;UBERON:0007284,1.37e-11,82;UBERON:0003528,3.13e-11,34;UBERON:0002020,3.13e-11,34;UBERON:0000955,3.57e-11,68;UBERON:0006238,3.57e-11,68;UBERON:0001893,4.04e-11,34;UBERON:0002346,2.00e-10,86;UBERON:0001017,3.15e-10,81;UBERON:0002791,5.53e-10,32;UBERON:0001869,1.05e-09,32;UBERON:0003056,1.69e-09,61;UBERON:0001016,1.04e-08,89;UBERON:0000178,1.21e-08,15;UBERON:0000179,1.21e-08,15;UBERON:0000463,1.21e-08,15;UBERON:0002619,2.12e-08,22;UBERON:0001950,4.69e-07,20;UBERON:0010371,5.06e-07,104;UBERON:0000956,7.53e-07,25;UBERON:0000203,7.53e-07,25;UBERON:0001894,8.18e-07,7;UBERON:0006222,8.18e-07,7 | |||
|phase1_expression=1.45342703416445,0.214100523890983,0.986680828671798,1.0007329835313,0.893922188854576,0,0,0,1.04474251279935,0,0,0,0,1.8564952944007,0.662794751455832,0,0,0,1.46379839637152,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0.61130724598361,0.0821005894499457,0.314843125254717,1.18009283054671,4.22212337906934,1.39334510984468,0,0,0,0.232401601740905,0.142169232487422,0,1.10799081706375,0.601633342410425,1.51907609501096,0.895661896959697,1.6194683300949,2.57575567634187,0.872389432677388,0.377875943688809,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0.211255286311942,1.27562579979026,0.628975936525128,0.561643155732475,0.150176892841506,0.64290234678832,0.570025487482497,0.39783335439818,0.365328307529268,1.75996244461323,1.63841583378639,2.66852776159066,0.853460445133014,2.00197993518006,1.72425731986345,0.661044872784862,0,0,1.17447437874188,0,0,1.68152568894461,0.263384084775077,3.93419540227666,3.53709686474248,3.90642848099067,22.0686173915695,6.19252306603822,5.6813736688168,1.94826728407911,33.8687788930928,8.83817722424511,12.84896588585,15.7066240983709,10.5034882175054,8.84403563407172,22.0346792168926,19.3445012450094,29.8497178307104,15.5700891320163,21.9383479033565,12.5442628565972,21.1888470844449,9.19729184644611,10.9960782554442,14.9281618291507,15.2911398875566,19.5325036156926,19.9594929334159,9.48623250189969,12.4147012819786,11.2437653897111,16.5744076430812,17.243687935342,4.83856183739358,2.40696176205157,7.09639579025715,0,1.34140171940727,0.12786256184353,0.361439152384566,0.50133791063589,0.579386075843295,1.5905718941022,0,0.378139268656271,0.221729397462564,0.351339142772504,1.24430121722827,0,0,1.29818957461873,1.91542711029194,0.930705723632056,1.19245312152671,1.14398982156026,0.74291500265913,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,11.6334079244498,0,0,0.633152558322899,0.926864265692532,2.0078563452417,0.354668382198357,0.560677600142307,0,0,0.622422070799533,0,0.326923806226917,0.454072282934794,0,0,0.312160076830321,0,0,0,0,0,0,0,0.413303124703062,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0.300476117813194,0,1.25572744982203,1.06778694409284,0.423863802319124,1.20036438433761,1.75189299705346,1.28820270022815,0.930584281657949,1.35021065793013,0.389748020644795,2.77677151668526,0.920498986422993,2.7479829659198,2.13005755509969,0.503760491138201,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,2.16563844500876,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0,0,0.380508304469197,0,0,0.246217006087397,0.234004265139238,0,0,0,0.141775097242386,0,0,0,0.492663237895943,1.76096868026452,1.03664057770386,1.29707958075265,0.6312121671319,0.063497894292169,0.381988425558278,0,0,0,0,0.857479297891735,0,0,0.07333828582095,1.16344544182,3.57656445851882,0,0.26593811658487,0,0,0,0,1.57275793023962,0.542621605391443,0,0,1.06617584622764,0,0,0,0.199945982364114,1.2162378064119,0,2.10833939483032,0,1.14861935834114,0,0,0.205476322550383,0,0.224170287987055,5.71389204585589,4.09692392233083,2.43851768931522,0.254094624222463,0,0,0,0,13.4821264310493,17.9496875522415,9.94597232246485,2.69921281782108,1.50051156317903,0.271265023699736,1.24782516918484,0.535286966391485,0.473107245101804,0.35142424497814,0.902838299183157,0,1.03473071292505,0,0.184369168541703,0.868836144680828,0.195801157462741,0,4.34212854858063,1.72571360654893,2.24127871387233,0,0,0,2.23297027036899,2.76231551918512,0,1.28139149255701,0.511707249066704,0.482561763430822,1.48418066444991,0.154209693802656,0,0.574890092096664,0,0,0.120859449591622,0,0.184161977871793,0,0,0.655622074797121,0,0,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,2.63111851975121,2.87578996127391,0,0.328014645699706,0,4.6368455241475,0.183138929636687,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,2.68550612170684,0.725083469571143,0,0.267096106940212,0,0,0,0,0,1.25924938732256,0,0,0,0,0.37064843820784,0,0.372158369359667,0,0.571890581771475,0.255897791311334,1.28381696410176,0.318203247925937,0,0.359744915166629,0,0.353437207037059,0.404364963146632,0,0,0,0.243713489631284,0,0.545999645631943,0,0,1.10273068709225,0,0.876901770507525,0,1.9676842561399,0,0,0.281695602532241,0.430234056612155,0.196498082026242,0,0.354761064070598,0.633322905892992,1.31717957183961,0.379473173765715,0,0,0,0,6.40177845282098,0,0,0,0,5.07447609232169,5.35246044999663,4.5571774973933,5.95579438644473,4.93634727703433,5.18778648954174,8.10047155857172,7.9312517629427,0,0,0,0,0.144269212976445,0.213425530045242,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0.540911356951966,0,0,0,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| ||
|short_description=p2@RBL2 | |short_description=p2@RBL2 | ||
}} | }} |
Latest revision as of 22:41, 16 September 2015
Short description: | p2@RBL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RBL2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000544405, uc010vgv.1_5end |
EntrezGene: | RBL2 |
HGNC: | 9894 |
UniProt: | F5H837 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.82e-16 | 18 |
alpha-beta T cell | 1.82e-16 | 18 |
immature T cell | 1.82e-16 | 18 |
mature T cell | 1.82e-16 | 18 |
immature alpha-beta T cell | 1.82e-16 | 18 |
CD8-positive, alpha-beta T cell | 1.64e-12 | 11 |
T cell | 3.14e-11 | 25 |
pro-T cell | 3.14e-11 | 25 |
lymphoid lineage restricted progenitor cell | 2.43e-08 | 52 |
lymphocyte | 5.08e-08 | 53 |
common lymphoid progenitor | 5.08e-08 | 53 |
granulocyte | 2.20e-07 | 8 |
CD4-positive, alpha-beta T cell | 5.96e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.57e-44 | 114 |
neural tube | 3.52e-19 | 56 |
neural rod | 3.52e-19 | 56 |
future spinal cord | 3.52e-19 | 56 |
neural keel | 3.52e-19 | 56 |
regional part of nervous system | 2.95e-17 | 53 |
regional part of brain | 2.95e-17 | 53 |
regional part of forebrain | 8.96e-16 | 41 |
forebrain | 8.96e-16 | 41 |
anterior neural tube | 8.96e-16 | 41 |
future forebrain | 8.96e-16 | 41 |
neural plate | 1.37e-11 | 82 |
presumptive neural plate | 1.37e-11 | 82 |
brain grey matter | 3.13e-11 | 34 |
gray matter | 3.13e-11 | 34 |
brain | 3.57e-11 | 68 |
future brain | 3.57e-11 | 68 |
telencephalon | 4.04e-11 | 34 |
neurectoderm | 2.00e-10 | 86 |
central nervous system | 3.15e-10 | 81 |
regional part of telencephalon | 5.53e-10 | 32 |
cerebral hemisphere | 1.05e-09 | 32 |
pre-chordal neural plate | 1.69e-09 | 61 |
nervous system | 1.04e-08 | 89 |
blood | 1.21e-08 | 15 |
haemolymphatic fluid | 1.21e-08 | 15 |
organism substance | 1.21e-08 | 15 |
regional part of cerebral cortex | 2.12e-08 | 22 |
neocortex | 4.69e-07 | 20 |
ecto-epithelium | 5.06e-07 | 104 |
cerebral cortex | 7.53e-07 | 25 |
pallium | 7.53e-07 | 25 |
diencephalon | 8.18e-07 | 7 |
future diencephalon | 8.18e-07 | 7 |