FFCP PHASE1:Hg19::chr2:135676381..135676435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=905 | |EntrezGene=905 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1600 | |HGNC=1600 | ||
|TSSclassifier=strong | |||
|UniProt=O60583,F8WDY7,F2Z2C9,B4DH21 | |UniProt=O60583,F8WDY7,F2Z2C9,B4DH21 | ||
|association_with_transcript=0bp_to_ENST00000264157,ENST00000295238,ENST00000417175,ENST00000452839,ENST00000464932,ENST00000475094,ENST00000537343,NM_001241,NM_058241,NR_037649,uc002tub.1,uc002tuc.1,uc002tud.1,uc010zbf.1_5end | |association_with_transcript=0bp_to_ENST00000264157,ENST00000295238,ENST00000417175,ENST00000452839,ENST00000464932,ENST00000475094,ENST00000537343,NM_001241,NM_058241,NR_037649,uc002tub.1,uc002tuc.1,uc002tud.1,uc010zbf.1_5end | ||
|cluster_id=chr2:135676381..135676435,+ | |||
|coexpression_cluster_id=C1025 | |||
|description=CAGE_peak_1_at_CCNT2_5end | |description=CAGE_peak_1_at_CCNT2_5end | ||
|id=chr2:135676381..135676435,+ | |id=chr2:135676381..135676435,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.43e-33!140;CL:0000037!2.05e-29!172;CL:0000566!2.05e-29!172;CL:0002032!1.16e-26!165;CL:0000837!1.16e-26!165;CL:0002031!1.83e-26!124;CL:0000988!7.27e-26!182;CL:0002087!1.07e-24!119;CL:0002057!1.64e-21!42;CL:0000766!9.62e-20!76;CL:0000860!8.82e-19!45;CL:0000557!1.46e-17!71;CL:0000763!2.41e-17!112;CL:0000049!2.41e-17!112;CL:0000839!1.66e-16!70;CL:0002009!3.69e-16!65;CL:0002194!4.04e-15!63;CL:0000576!4.04e-15!63;CL:0000040!4.04e-15!63;CL:0000559!4.04e-15!63;CL:0000838!3.51e-09!52;CL:0000542!6.76e-09!53;CL:0000051!6.76e-09!53;CL:0000791!8.03e-08!18;CL:0000789!8.03e-08!18;CL:0002420!8.03e-08!18;CL:0002419!8.03e-08!18;CL:0000790!8.03e-08!18 | |ontology_enrichment_celltype=CL:0000738!3.43e-33!140;CL:0000037!2.05e-29!172;CL:0000566!2.05e-29!172;CL:0002032!1.16e-26!165;CL:0000837!1.16e-26!165;CL:0002031!1.83e-26!124;CL:0000988!7.27e-26!182;CL:0002087!1.07e-24!119;CL:0002057!1.64e-21!42;CL:0000766!9.62e-20!76;CL:0000860!8.82e-19!45;CL:0000557!1.46e-17!71;CL:0000763!2.41e-17!112;CL:0000049!2.41e-17!112;CL:0000839!1.66e-16!70;CL:0002009!3.69e-16!65;CL:0002194!4.04e-15!63;CL:0000576!4.04e-15!63;CL:0000040!4.04e-15!63;CL:0000559!4.04e-15!63;CL:0000838!3.51e-09!52;CL:0000542!6.76e-09!53;CL:0000051!6.76e-09!53;CL:0000791!8.03e-08!18;CL:0000789!8.03e-08!18;CL:0002420!8.03e-08!18;CL:0002419!8.03e-08!18;CL:0000790!8.03e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.69e-17;33!CL:0002057;8.69e-17;33!CL:0000576;2.86e-13;48!CL:0000473;2.56e-12;39!CL:0000234;2.56e-12;39!CL:0000766;2.95e-10;69!CL:0002087;1.85e-09;104!CL:0000791;6.65e-08;18!CL:0000789;6.65e-08;18!CL:0002419;6.65e-08;18!CL:0000738;8.00e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.32e-35,136;CL:0000037,5.27e-31,168;CL:0002031,2.45e-28,120;CL:0002032,3.42e-28,161;CL:0000837,3.42e-28,161;CL:0000988,6.04e-28,177;CL:0002087,1.56e-26,115;CL:0000766,6.33e-22,72;CL:0000860,1.64e-21,42;CL:0002057,1.64e-21,42;CL:0000557,1.15e-19,67;CL:0000473,2.78e-19,48;CL:0000234,2.78e-19,48;CL:0000763,7.86e-19,108;CL:0000049,7.86e-19,108;CL:0000839,1.55e-18,66;CL:0002009,2.85e-18,61;CL:0002194,3.56e-17,59;CL:0000576,3.56e-17,59;CL:0000040,3.56e-17,59;CL:0000559,3.56e-17,59;CL:0000838,3.51e-09,52;CL:0000542,6.76e-09,53;CL:0000051,6.76e-09,53;CL:0000791,8.03e-08,18;CL:0000789,8.03e-08,18;CL:0002420,8.03e-08,18;CL:0002419,8.03e-08,18;CL:0000790,8.03e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002057;6.78e-16;42!CL:0000790;6.65e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.53e-20!115;UBERON:0002390!5.82e-18!102;UBERON:0003061!5.82e-18!102;UBERON:0002193!5.66e-16!112;UBERON:0001049!1.12e-13!57;UBERON:0005068!1.12e-13!57;UBERON:0006241!1.12e-13!57;UBERON:0007135!1.12e-13!57;UBERON:0002371!3.58e-13!80;UBERON:0003080!4.06e-12!42;UBERON:0001017!4.93e-12!82;UBERON:0001474!5.53e-12!86;UBERON:0002780!5.57e-12!41;UBERON:0001890!5.57e-12!41;UBERON:0006240!5.57e-12!41;UBERON:0002616!3.67e-11!59;UBERON:0002405!9.40e-11!115;UBERON:0000955!1.04e-10!69;UBERON:0006238!1.04e-10!69;UBERON:0005743!2.22e-10!86;UBERON:0000073!2.56e-10!94;UBERON:0001016!2.56e-10!94;UBERON:0001893!2.23e-09!34;UBERON:0002020!2.77e-09!34;UBERON:0003528!2.77e-09!34;UBERON:0002791!3.73e-09!33;UBERON:0001869!5.96e-09!32;UBERON:0004765!2.11e-08!101;UBERON:0001434!2.11e-08!101;UBERON:0002619!5.59e-07!22;UBERON:0000956!8.76e-07!25;UBERON:0000203!8.76e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.50e-09;41!UBERON:0001890;4.50e-09;41!UBERON:0002791;2.85e-08;32!UBERON:0001869;3.24e-08;32!UBERON:0003528;3.80e-08;34!UBERON:0002020;3.80e-08;34!UBERON:0001893;4.95e-08;34!UBERON:0000073;8.41e-08;53!UBERON:0002616;8.41e-08;53!UBERON:0002619;5.93e-07;22!UBERON:0000956;8.97e-07;25!UBERON:0000203;8.97e-07;25 | |||
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| ||
|short_description=p1@CCNT2 | |short_description=p1@CCNT2 | ||
}} | }} |
Latest revision as of 01:52, 17 September 2015
Short description: | p1@CCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCNT2_5end |
Coexpression cluster: | C1025_Mast_lung_pineal_pituitary_cerebellum_Neutrophils_CD14 |
Association with transcript: | 0bp_to_ENST00000264157, ENST00000295238, ENST00000417175, ENST00000452839, ENST00000464932, ENST00000475094, ENST00000537343, NM_001241, NM_058241, NR_037649, uc002tub.1, uc002tuc.1, uc002tud.1, uc010zbf.1_5end |
EntrezGene: | CCNT2 |
HGNC: | 1600 |
UniProt: | O60583F8WDY7F2Z2C9B4DH21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.57e-20 | 114 |
hematopoietic system | 1.36e-19 | 98 |
blood island | 1.36e-19 | 98 |
hemolymphoid system | 2.25e-17 | 108 |
bone marrow | 1.02e-14 | 76 |
immune system | 1.57e-13 | 93 |
neural tube | 1.58e-13 | 56 |
neural rod | 1.58e-13 | 56 |
future spinal cord | 1.58e-13 | 56 |
neural keel | 1.58e-13 | 56 |
bone element | 2.37e-13 | 82 |
regional part of nervous system | 1.96e-12 | 53 |
regional part of brain | 1.96e-12 | 53 |
regional part of forebrain | 5.57e-12 | 41 |
forebrain | 5.57e-12 | 41 |
anterior neural tube | 5.57e-12 | 41 |
future forebrain | 5.57e-12 | 41 |
central nervous system | 7.10e-12 | 81 |
nervous system | 1.05e-11 | 89 |
brain | 1.48e-10 | 68 |
future brain | 1.48e-10 | 68 |
skeletal element | 2.46e-10 | 90 |
telencephalon | 2.23e-09 | 34 |
brain grey matter | 2.77e-09 | 34 |
gray matter | 2.77e-09 | 34 |
regional part of telencephalon | 5.61e-09 | 32 |
cerebral hemisphere | 5.96e-09 | 32 |
skeletal system | 1.57e-08 | 100 |
regional part of cerebral cortex | 5.59e-07 | 22 |
cerebral cortex | 8.76e-07 | 25 |
pallium | 8.76e-07 | 25 |