FFCP PHASE1:Hg19::chr3:18465604..18465618,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6304 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10541 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=446bp_to_ENST00000417717_5end | |||
|cluster_id=chr3:18465604..18465618,- | |||
|description=CAGE_peak_9_at_SATB1_5end | |||
|id=chr3:18465604..18465618,- | |||
|ontology_enrichment_celltype=CL:0002087!3.65e-09!119;CL:0000037!5.13e-09!172;CL:0000566!5.13e-09!172;CL:0000738!5.84e-09!140;CL:0002031!1.64e-08!124;CL:0000084!4.27e-08!25;CL:0000827!4.27e-08!25;CL:0002032!5.38e-08!165;CL:0000837!5.38e-08!165;CL:0000988!6.99e-08!182;CL:0000791!2.62e-07!18;CL:0000789!2.62e-07!18;CL:0002420!2.62e-07!18;CL:0002419!2.62e-07!18;CL:0000790!2.62e-07!18 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.03e-30!115;UBERON:0001049!1.48e-13!57;UBERON:0005068!1.48e-13!57;UBERON:0006241!1.48e-13!57;UBERON:0007135!1.48e-13!57;UBERON:0002780!9.86e-13!41;UBERON:0001890!9.86e-13!41;UBERON:0006240!9.86e-13!41;UBERON:0003080!4.71e-12!42;UBERON:0002616!7.81e-12!59;UBERON:0002020!1.53e-10!34;UBERON:0003528!1.53e-10!34;UBERON:0001893!2.92e-10!34;UBERON:0005743!6.07e-10!86;UBERON:0000073!7.39e-10!94;UBERON:0001016!7.39e-10!94;UBERON:0001869!8.46e-10!32;UBERON:0002791!8.60e-10!33;UBERON:0000955!1.02e-09!69;UBERON:0006238!1.02e-09!69;UBERON:0001017!1.58e-09!82;UBERON:0002619!1.70e-09!22;UBERON:0000956!2.53e-08!25;UBERON:0000203!2.53e-08!25;UBERON:0001950!2.57e-08!20;UBERON:0003075!3.26e-08!86;UBERON:0007284!3.26e-08!86;UBERON:0002346!5.68e-08!90;UBERON:0002390!3.95e-07!102;UBERON:0003061!3.95e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.57e-15;22!UBERON:0000956;3.02e-13;25!UBERON:0000203;3.02e-13;25!UBERON:0001950;7.46e-13;20!UBERON:0002021;5.01e-10;5!UBERON:0001869;6.67e-10;32!UBERON:0003528;2.31e-09;34!UBERON:0002020;2.31e-09;34!UBERON:0002780;6.09e-09;41!UBERON:0001890;6.09e-09;41!UBERON:0001893;8.39e-09;34!UBERON:0002791;3.10e-08;32!UBERON:0000200;1.10e-07;6!UBERON:0006947;2.21e-07;3!UBERON:0004054;2.21e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.30e-22,114;UBERON:0002619,2.18e-15,22;UBERON:0000956,4.00e-13,25;UBERON:0000203,4.00e-13,25;UBERON:0002780,7.35e-13,41;UBERON:0001890,7.35e-13,41;UBERON:0003080,7.35e-13,41;UBERON:0006240,7.35e-13,41;UBERON:0001950,1.04e-12,20;UBERON:0001049,2.41e-12,56;UBERON:0005068,2.41e-12,56;UBERON:0006241,2.41e-12,56;UBERON:0007135,2.41e-12,56;UBERON:0000073,4.91e-12,53;UBERON:0002616,4.91e-12,53;UBERON:0003528,3.21e-11,34;UBERON:0002020,3.21e-11,34;UBERON:0001869,8.07e-11,32;UBERON:0002021,5.62e-10,5;UBERON:0001893,5.87e-10,34;UBERON:0002791,1.76e-09,32;UBERON:0001017,5.00e-09,81;UBERON:0000955,7.25e-09,68;UBERON:0006238,7.25e-09,68;UBERON:0001016,3.75e-08,89;UBERON:0006947,1.77e-07,3;UBERON:0004054,1.77e-07,3;UBERON:0000200,2.05e-07,6;UBERON:0002346,2.53e-07,86;UBERON:0003075,2.82e-07,82;UBERON:0007284,2.82e-07,82;UBERON:0003056,5.21e-07,61 | |||
|phase1_expression=0.363356758541113,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0.369754010166788,0.309868802321207,0,0.587200878669695,1.10799081706375,1.80490002723128,1.30206522429511,0.671746422719773,0.32389366601898,0.77272670290256,0.726991193897824,0.755751887377619,1.21292030593908,1.39457422143411,1.23350366406548,0,1.7261543539329,0.768482119587302,0.236482229888585,1.37898272294647,0,1.35426486594342,1.50593871634084,1.09162460023138,0.449446968890169,1.22433556948361,0.320929027076094,0,0.329851300186716,0.598390972864896,0,0.870627715885752,0,0.622822248995575,1.7587406567972,0,0.65156653411535,0,0,0.316462387440884,0,0.637812899895131,0,0,0.600707571366025,0.16072558669708,0,0.39783335439818,0.365328307529268,0,1.09227722252426,0.889509253863555,0.426730222566507,0.800791974072025,0,0,0,0.569212969109448,1.76171156811282,0,0,0.560508562981536,0.263384084775077,1.57367816091066,3.53709686474248,1.02800749499755,0.334372990781356,0.32592226663359,0.473447805734733,0,0.779873198196215,0.589211814949674,0.664601683750863,0.270803863765016,1.66518715643378,1.30059347559878,3.61763390128087,3.03985019564433,0.869409257205157,2.37258501059297,1.87278579662799,1.04535523804977,0.793165398882963,0.383220493601921,0,0.759059076058509,1.27426165729639,0,0.950452044448374,0.752875595388864,0.895906278080929,3.74792179657038,0.947109008176067,0.821127996921047,1.61285394579786,1.87208137048455,1.15859523106239,0,0,0,0,0,0,0,0.973269740605272,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0,0.696518949197069,0,0.715471872916026,0,0.371457501329565,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,1.31780417436063,0,0.872188104285069,0.496971951695318,0,0,0,0,0,0,0,0,0.404132016209064,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0.408308342509787,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.45071417671979,0,0,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0,0.194874010322397,0,0.276149695926898,0,0.355009592516614,0,0.169560592310488,0,0,0,0.243947412259191,0,0.232387885739037,0,0,0.36497735907583,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0.864719720501769,0.25248486685276,0.063497894292169,0,0,0,0,0,0.571652865261156,0,0,0.1466765716419,0.258543431515556,0,0,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,1.00451418286425,0,0,0,0,0,0,0.358121926479791,0.112085143993527,1.37921532141349,1.72502059887614,2.18183161675572,0,0,0,0.167516265334349,1.27587750330633,0,0,0.414415513436035,0,0,0.271265023699736,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.853820462427555,0,0,0,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0.519254429183621,0.116210378459959,0,0,0.0920809889358963,0,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,1.0795795805107,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0.656029291399411,0.650756789328606,1.03041011647722,0.0915694648183434,0.165018999841176,0,0,0,0.290012154876366,0,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0,0,0.929691098594572,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.564862804660675,0,0,0,0.229723400206959,2.53723804616085,2.29391162142713,1.13929437434833,1.42939065274673,0.411362273086194,2.59389324477087,1.08006287447623,1.58625035258854,0,0,0,0,0,1.06712765022621,0.318852545457645,0.199579371432817,0.191505370132367,1.69338866179106,0,0.842391534340376,0.912938716132769,0.156679895773023,0,0.50787533340481,0.1605880751037,1.41259795033733,0,1.37402137902306,0.307240764308458,1.56573275524691,0.333698283423817,0.390776190804081,0,0,0,0.99921590399346,0,0,0.146508179271894,0,0,0,0,0,0,0,0.844016498463076,0.333926115068718,0.16480387422676,0,0.398495976502139,1.38141957765574,0.755798243562828,0,0,0.311039587661807,0.0898683511473268,0,1.53471711068062,0.887790650732402,0,0,0.969332746095218,2.22643435588443,0,0,0,0,0,0,0,1.03423011972439,1.45802306691627,0,0.885741385813839,0.482385754501632,1.52581736317083,0.884634079449797,0.591095237907095,2.85201016300164,0,0.139423744278603,0.615602068030377,0,0.23056390438806,0,0.108647371922008,0,0.183195186803725,0,2.04386596391473,0.31396051279005,0.332423363800313,0,0,0,0.75901493089674,0,0,0,0,0,0,0.884575645033392,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| |||
|short_description=p9@SATB1 | |||
}} |
Latest revision as of 03:01, 17 September 2015
Short description: | p9@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SATB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 446bp_to_ENST00000417717_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.30e-22 | 114 |
regional part of cerebral cortex | 2.18e-15 | 22 |
cerebral cortex | 4.00e-13 | 25 |
pallium | 4.00e-13 | 25 |
regional part of forebrain | 7.35e-13 | 41 |
forebrain | 7.35e-13 | 41 |
anterior neural tube | 7.35e-13 | 41 |
future forebrain | 7.35e-13 | 41 |
neocortex | 1.04e-12 | 20 |
neural tube | 2.41e-12 | 56 |
neural rod | 2.41e-12 | 56 |
future spinal cord | 2.41e-12 | 56 |
neural keel | 2.41e-12 | 56 |
regional part of nervous system | 4.91e-12 | 53 |
regional part of brain | 4.91e-12 | 53 |
brain grey matter | 3.21e-11 | 34 |
gray matter | 3.21e-11 | 34 |
cerebral hemisphere | 8.07e-11 | 32 |
occipital lobe | 5.62e-10 | 5 |
telencephalon | 5.87e-10 | 34 |
regional part of telencephalon | 1.76e-09 | 32 |
central nervous system | 5.00e-09 | 81 |
brain | 7.25e-09 | 68 |
future brain | 7.25e-09 | 68 |
nervous system | 3.75e-08 | 89 |
male genital duct | 1.77e-07 | 3 |
internal male genitalia | 1.77e-07 | 3 |
gyrus | 2.05e-07 | 6 |
neurectoderm | 2.53e-07 | 86 |
neural plate | 2.82e-07 | 82 |
presumptive neural plate | 2.82e-07 | 82 |
pre-chordal neural plate | 5.21e-07 | 61 |