FFCP PHASE1:Hg19::chr2:38830160..38830206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92906 | |EntrezGene=92906 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25127 | |HGNC=25127 | ||
|TSSclassifier=strong | |||
|UniProt=C9IYN3,A8K894,Q8WVV9 | |UniProt=C9IYN3,A8K894,Q8WVV9 | ||
|association_with_transcript=0bp_to_ENST00000358367,ENST00000409636,NM_001142650,NM_138394,uc002rqw.2,uc002rqx.2_5end | |association_with_transcript=0bp_to_ENST00000358367,ENST00000409636,NM_001142650,NM_138394,uc002rqw.2,uc002rqx.2_5end | ||
|cluster_id=chr2:38830160..38830206,- | |||
|coexpression_cluster_id=C900 | |||
|description=CAGE_peak_3_at_HNRPLL_5end | |description=CAGE_peak_3_at_HNRPLL_5end | ||
|id=chr2:38830160..38830206,- | |id=chr2:38830160..38830206,- | ||
|ontology_enrichment_celltype=CL:0000037!5.58e-24!172;CL:0000566!5.58e-24!172;CL:0002032!4.68e-23!165;CL:0000837!4.68e-23!165;CL:0000988!3.02e-22!182;CL:0000738!6.99e-20!140;CL:0002031!3.38e-16!124;CL:0002087!6.83e-16!119;CL:0000542!3.69e-14!53;CL:0000051!3.69e-14!53;CL:0000084!4.49e-14!25;CL:0000827!4.49e-14!25;CL:0000838!8.15e-14!52;CL:0000791!1.16e-12!18;CL:0000789!1.16e-12!18;CL:0002420!1.16e-12!18;CL:0002419!1.16e-12!18;CL:0000790!1.16e-12!18;CL:0000763!3.43e-10!112;CL:0000049!3.43e-10!112;CL:0000625!3.11e-08!11 | |ontology_enrichment_celltype=CL:0000037!5.58e-24!172;CL:0000566!5.58e-24!172;CL:0002032!4.68e-23!165;CL:0000837!4.68e-23!165;CL:0000988!3.02e-22!182;CL:0000738!6.99e-20!140;CL:0002031!3.38e-16!124;CL:0002087!6.83e-16!119;CL:0000542!3.69e-14!53;CL:0000051!3.69e-14!53;CL:0000084!4.49e-14!25;CL:0000827!4.49e-14!25;CL:0000838!8.15e-14!52;CL:0000791!1.16e-12!18;CL:0000789!1.16e-12!18;CL:0002420!1.16e-12!18;CL:0002419!1.16e-12!18;CL:0000790!1.16e-12!18;CL:0000763!3.43e-10!112;CL:0000049!3.43e-10!112;CL:0000625!3.11e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.29e-16;25!CL:0000791;7.06e-15;18!CL:0000789;7.06e-15;18!CL:0002419;7.06e-15;18!CL:0000625;1.52e-09;11!CL:0000542;1.00e-08;53!CL:0002087;2.95e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.07e-28,168;CL:0002032,5.29e-27,161;CL:0000837,5.29e-27,161;CL:0000988,4.03e-26,177;CL:0000738,5.07e-24,136;CL:0002031,5.20e-19,120;CL:0002087,1.18e-18,115;CL:0000084,1.49e-16,25;CL:0000827,1.49e-16,25;CL:0000542,2.70e-16,53;CL:0000051,2.70e-16,53;CL:0000838,6.96e-16,52;CL:0000791,7.37e-15,18;CL:0000789,7.37e-15,18;CL:0002420,7.37e-15,18;CL:0002419,7.37e-15,18;CL:0000790,7.37e-15,18;CL:0000763,7.90e-12,108;CL:0000049,7.90e-12,108;CL:0000625,1.47e-09,11;CL:0000766,1.21e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;7.06e-15;18!CL:0000051;1.00e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.67e-34!115;UBERON:0001049!8.87e-16!57;UBERON:0005068!8.87e-16!57;UBERON:0006241!8.87e-16!57;UBERON:0007135!8.87e-16!57;UBERON:0003080!2.33e-13!42;UBERON:0002780!3.27e-13!41;UBERON:0001890!3.27e-13!41;UBERON:0006240!3.27e-13!41;UBERON:0001017!2.03e-12!82;UBERON:0002616!2.49e-12!59;UBERON:0005743!4.37e-12!86;UBERON:0000073!1.86e-11!94;UBERON:0001016!1.86e-11!94;UBERON:0000955!1.13e-10!69;UBERON:0006238!1.13e-10!69;UBERON:0002346!1.30e-10!90;UBERON:0002020!1.52e-10!34;UBERON:0003528!1.52e-10!34;UBERON:0002390!1.79e-10!102;UBERON:0003061!1.79e-10!102;UBERON:0001893!2.56e-10!34;UBERON:0003075!4.66e-10!86;UBERON:0007284!4.66e-10!86;UBERON:0002791!4.73e-10!33;UBERON:0001869!9.60e-10!32;UBERON:0002193!2.57e-09!112;UBERON:0002619!1.12e-07!22;UBERON:0003056!1.37e-07!61;UBERON:0000956!2.91e-07!25;UBERON:0000203!2.91e-07!25;UBERON:0001950!5.67e-07!20;UBERON:0000178!6.87e-07!15;UBERON:0000179!6.87e-07!15;UBERON:0000463!6.87e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.49e-10;114!UBERON:0002780;6.35e-10;41!UBERON:0001890;6.35e-10;41!UBERON:0000073;7.72e-09;53!UBERON:0002616;7.72e-09;53!UBERON:0002791;1.13e-08;32!UBERON:0003528;1.26e-08;34!UBERON:0002020;1.26e-08;34!UBERON:0001869;1.70e-08;32!UBERON:0001893;1.73e-08;34!UBERON:0002619;8.40e-08;22!UBERON:0001950;4.49e-07;20!UBERON:0000178;6.55e-07;15!UBERON:0000179;6.55e-07;15!UBERON:0000463;6.55e-07;15 | |||
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| ||
|short_description=p3@HNRPLL | |short_description=p3@HNRPLL | ||
}} | }} |
Latest revision as of 04:13, 17 September 2015
Short description: | p3@HNRPLL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HNRPLL_5end |
Coexpression cluster: | C900_CD4_thymus_Hodgkin_CD8_CD34_chronic_CD133 |
Association with transcript: | 0bp_to_ENST00000358367, ENST00000409636, NM_001142650, NM_138394, uc002rqw.2, uc002rqx.2_5end |
EntrezGene: | HNRPLL |
HGNC: | 25127 |
UniProt: | C9IYN3A8K894Q8WVV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.07e-28 | 168 |
hematopoietic oligopotent progenitor cell | 5.29e-27 | 161 |
hematopoietic multipotent progenitor cell | 5.29e-27 | 161 |
hematopoietic cell | 4.03e-26 | 177 |
leukocyte | 5.07e-24 | 136 |
hematopoietic lineage restricted progenitor cell | 5.20e-19 | 120 |
nongranular leukocyte | 1.18e-18 | 115 |
T cell | 1.49e-16 | 25 |
pro-T cell | 1.49e-16 | 25 |
lymphocyte | 2.70e-16 | 53 |
common lymphoid progenitor | 2.70e-16 | 53 |
lymphoid lineage restricted progenitor cell | 6.96e-16 | 52 |
mature alpha-beta T cell | 7.37e-15 | 18 |
alpha-beta T cell | 7.37e-15 | 18 |
immature T cell | 7.37e-15 | 18 |
mature T cell | 7.37e-15 | 18 |
immature alpha-beta T cell | 7.37e-15 | 18 |
myeloid cell | 7.90e-12 | 108 |
common myeloid progenitor | 7.90e-12 | 108 |
CD8-positive, alpha-beta T cell | 1.47e-09 | 11 |
myeloid leukocyte | 1.21e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.27e-38 | 114 |
neural tube | 6.77e-17 | 56 |
neural rod | 6.77e-17 | 56 |
future spinal cord | 6.77e-17 | 56 |
neural keel | 6.77e-17 | 56 |
regional part of nervous system | 8.99e-16 | 53 |
regional part of brain | 8.99e-16 | 53 |
regional part of forebrain | 5.22e-14 | 41 |
forebrain | 5.22e-14 | 41 |
anterior neural tube | 5.22e-14 | 41 |
future forebrain | 5.22e-14 | 41 |
central nervous system | 2.78e-12 | 81 |
hematopoietic system | 7.44e-12 | 98 |
blood island | 7.44e-12 | 98 |
nervous system | 3.13e-11 | 89 |
brain grey matter | 6.95e-11 | 34 |
gray matter | 6.95e-11 | 34 |
neurectoderm | 9.34e-11 | 86 |
telencephalon | 1.25e-10 | 34 |
hemolymphoid system | 1.45e-10 | 108 |
neural plate | 2.18e-10 | 82 |
presumptive neural plate | 2.18e-10 | 82 |
regional part of telencephalon | 4.57e-10 | 32 |
brain | 5.48e-10 | 68 |
future brain | 5.48e-10 | 68 |
cerebral hemisphere | 5.93e-10 | 32 |
regional part of cerebral cortex | 2.43e-08 | 22 |
pre-chordal neural plate | 1.44e-07 | 61 |
neocortex | 1.66e-07 | 20 |
cerebral cortex | 4.42e-07 | 25 |
pallium | 4.42e-07 | 25 |
blood | 5.35e-07 | 15 |
haemolymphatic fluid | 5.35e-07 | 15 |
organism substance | 5.35e-07 | 15 |