FFCP PHASE1:Hg19::chr19:31840130..31840160,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57616 | |EntrezGene=57616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30700 | |HGNC=30700 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558569_5end | |association_with_transcript=0bp_to_ENST00000558569_5end | ||
|cluster_id=chr19:31840130..31840160,- | |||
|coexpression_cluster_id=C398 | |coexpression_cluster_id=C398 | ||
|description=CAGE_peak_2_at_TSHZ3_5end | |description=CAGE_peak_2_at_TSHZ3_5end | ||
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|ontology_enrichment_celltype=CL:0000055!6.57e-21!180;CL:0000057!7.93e-13!75;CL:0000680!2.69e-08!57;CL:0000056!2.69e-08!57;CL:0000355!2.69e-08!57;CL:0000187!4.22e-08!54;CL:0000192!4.71e-08!42;CL:0000514!4.71e-08!42;CL:0000183!1.14e-07!59;CL:0000393!1.34e-07!60;CL:0000211!1.34e-07!60 | |ontology_enrichment_celltype=CL:0000055!6.57e-21!180;CL:0000057!7.93e-13!75;CL:0000680!2.69e-08!57;CL:0000056!2.69e-08!57;CL:0000355!2.69e-08!57;CL:0000187!4.22e-08!54;CL:0000192!4.71e-08!42;CL:0000514!4.71e-08!42;CL:0000183!1.14e-07!59;CL:0000393!1.34e-07!60;CL:0000211!1.34e-07!60 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.59e-11,76;CL:0000192,5.29e-08,43;CL:0000514,5.29e-08,43;CL:0000187,5.55e-08,55;CL:0000680,1.08e-07,58;CL:0000056,1.08e-07,58;CL:0000355,1.08e-07,58;CL:0000393,2.36e-07,61;CL:0000211,2.36e-07,61;CL:0002539,7.33e-07,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;5.07e-12;20!UBERON:0002619;1.96e-11;22!UBERON:0000956;5.57e-10;25!UBERON:0000203;5.57e-10;25!UBERON:0001869;2.05e-08;32!UBERON:0002791;1.24e-07;32!UBERON:0001135;1.68e-07;15!UBERON:0001893;2.38e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0001950;5.07e-12;20!UBERON:0002619;1.96e-11;22!UBERON:0000956;5.57e-10;25!UBERON:0000203;5.57e-10;25!UBERON:0001869;2.05e-08;32!UBERON:0002791;1.24e-07;32!UBERON:0001135;1.68e-07;15!UBERON:0001893;2.38e-07;34 | ||
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| ||
|short_description=p2@TSHZ3 | |short_description=p2@TSHZ3 | ||
}} | }} |
Latest revision as of 05:07, 17 September 2015
Short description: | p2@TSHZ3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TSHZ3_5end |
Coexpression cluster: | C398_neuroepithelioma_neuroectodermal_carcinoid_neuroblastoma_spinal_brain_synovial |
Association with transcript: | 0bp_to_ENST00000558569_5end |
EntrezGene: | TSHZ3 |
HGNC: | 30700 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.59e-11 | 76 |
smooth muscle cell | 5.29e-08 | 43 |
smooth muscle myoblast | 5.29e-08 | 43 |
muscle cell | 5.55e-08 | 55 |
muscle precursor cell | 1.08e-07 | 58 |
myoblast | 1.08e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.08e-07 | 58 |
electrically responsive cell | 2.36e-07 | 61 |
electrically active cell | 2.36e-07 | 61 |
aortic smooth muscle cell | 7.33e-07 | 10 |