FFCP PHASE1:Hg19::chr5:177580855..177580927,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55651 | |EntrezGene=55651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14377 | |HGNC=14377 | ||
|TSSclassifier=strong | |||
|UniProt=D6RC52,D6RCB9 | |UniProt=D6RC52,D6RCB9 | ||
|association_with_transcript=0bp_to_ENST00000510363,ENST00000511078,ENST00000514354_5end | |association_with_transcript=0bp_to_ENST00000510363,ENST00000511078,ENST00000514354_5end | ||
|cluster_id=chr5:177580855..177580927,- | |||
|coexpression_cluster_id=C447 | |coexpression_cluster_id=C447 | ||
|description=CAGE_peak_1_at_NHP2_5end | |description=CAGE_peak_1_at_NHP2_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.51e-21!254;CL:0002321!2.93e-20!248;CL:0000220!4.07e-20!246;CL:0000012!1.54e-17!682;CL:0000548!2.02e-17!679;CL:0000004!2.02e-17!679;CL:0000255!2.02e-17!679;CL:0000222!5.20e-15!119;CL:0000183!3.48e-10!59;CL:0000393!9.82e-10!60;CL:0000211!9.82e-10!60;CL:0000055!1.54e-09!180;CL:0000076!1.14e-08!62;CL:0000187!1.76e-08!54;CL:0000003!3.21e-08!722;CL:0000680!4.83e-08!57;CL:0000056!4.83e-08!57;CL:0000355!4.83e-08!57;CL:0000144!1.52e-07!625;CL:0000071!1.71e-07!18;CL:0002546!1.71e-07!18;CL:0000192!2.63e-07!42;CL:0000514!2.63e-07!42;CL:0000213!3.04e-07!57;CL:0000215!3.04e-07!57;CL:0002078!4.16e-07!44;CL:1000449!5.26e-07!16 | |ontology_enrichment_celltype=CL:0000066!1.51e-21!254;CL:0002321!2.93e-20!248;CL:0000220!4.07e-20!246;CL:0000012!1.54e-17!682;CL:0000548!2.02e-17!679;CL:0000004!2.02e-17!679;CL:0000255!2.02e-17!679;CL:0000222!5.20e-15!119;CL:0000183!3.48e-10!59;CL:0000393!9.82e-10!60;CL:0000211!9.82e-10!60;CL:0000055!1.54e-09!180;CL:0000076!1.14e-08!62;CL:0000187!1.76e-08!54;CL:0000003!3.21e-08!722;CL:0000680!4.83e-08!57;CL:0000056!4.83e-08!57;CL:0000355!4.83e-08!57;CL:0000144!1.52e-07!625;CL:0000071!1.71e-07!18;CL:0002546!1.71e-07!18;CL:0000192!2.63e-07!42;CL:0000514!2.63e-07!42;CL:0000213!3.04e-07!57;CL:0000215!3.04e-07!57;CL:0002078!4.16e-07!44;CL:1000449!5.26e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000071;1.71e-07;18!CL:1000449;1.99e-07;15!CL:1000497;4.65e-07;17!CL:0002518;4.65e-07;17 | |ontology_enrichment_celltype_v019=CL:0000071;1.71e-07;18!CL:1000449;1.99e-07;15!CL:1000497;4.65e-07;17!CL:0002518;4.65e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.26e-21,253;CL:0002321,1.41e-20,250;CL:0000222,2.80e-15,121;CL:0000393,1.42e-09,61;CL:0000211,1.42e-09,61;CL:0000076,8.37e-09,63;CL:0000187,2.51e-08,55;CL:0000680,6.64e-08,58;CL:0000056,6.64e-08,58;CL:0000355,6.64e-08,58;CL:0000213,1.32e-07,58;CL:0000215,1.32e-07,58;CL:0002078,1.70e-07,45;CL:0000071,1.71e-07,18;CL:0002546,1.71e-07,18;CL:1000449,2.02e-07,15;CL:0000192,3.83e-07,43;CL:0000514,3.83e-07,43;CL:0000115,4.23e-07,36;CL:1000497,4.73e-07,17;CL:0002518,4.73e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;1.71e-07;18 | |ontology_enrichment_development_v019=CL:0002546;1.71e-07;18 | ||
|ontology_enrichment_disease=DOID:162!2.73e-18!235;DOID:14566!3.39e-18!239;DOID:2531!1.05e-10!51;DOID:0060083!1.05e-10!51;DOID:0050686!1.87e-10!137;DOID:0050687!3.59e-09!143;DOID:1240!3.46e-08!39;DOID:305!4.67e-08!106;DOID:8692!4.58e-07!31 | |ontology_enrichment_disease=DOID:162!2.73e-18!235;DOID:14566!3.39e-18!239;DOID:2531!1.05e-10!51;DOID:0060083!1.05e-10!51;DOID:0050686!1.87e-10!137;DOID:0050687!3.59e-09!143;DOID:1240!3.46e-08!39;DOID:305!4.67e-08!106;DOID:8692!4.58e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:2531;6.48e-07;51!DOID:0060083;6.48e-07;51!DOID:8692;6.65e-07;31!DOID:1240;9.39e-07;39 | |ontology_enrichment_disease_v019=DOID:2531;6.48e-07;51!DOID:0060083;6.48e-07;51!DOID:8692;6.65e-07;31!DOID:1240;9.39e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:162,2.73e-18,235;DOID:14566,3.39e-18,239;DOID:2531,1.05e-10,51;DOID:0060083,1.05e-10,51;DOID:0050686,1.87e-10,137;DOID:0050687,3.59e-09,143;DOID:1240,3.46e-08,39;DOID:305,4.67e-08,106;DOID:8692,4.58e-07,31 | |||
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| ||
|short_description=p1@NHP2 | |short_description=p1@NHP2 | ||
}} | }} |
Latest revision as of 07:35, 17 September 2015
Short description: | p1@NHP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NHP2_5end |
Coexpression cluster: | C447_Alveolar_Bronchial_Smooth_Renal_Tracheal_Keratocytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000510363, ENST00000511078, ENST00000514354_5end |
EntrezGene: | NHP2 |
HGNC: | 14377 |
UniProt: | D6RC52D6RCB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.26e-21 | 253 |
embryonic cell | 1.41e-20 | 250 |
mesodermal cell | 2.80e-15 | 121 |
electrically responsive cell | 1.42e-09 | 61 |
electrically active cell | 1.42e-09 | 61 |
squamous epithelial cell | 8.37e-09 | 63 |
muscle cell | 2.51e-08 | 55 |
muscle precursor cell | 6.64e-08 | 58 |
myoblast | 6.64e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.64e-08 | 58 |
lining cell | 1.32e-07 | 58 |
barrier cell | 1.32e-07 | 58 |
meso-epithelial cell | 1.70e-07 | 45 |
blood vessel endothelial cell | 1.71e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.71e-07 | 18 |
epithelial cell of nephron | 2.02e-07 | 15 |
smooth muscle cell | 3.83e-07 | 43 |
smooth muscle myoblast | 3.83e-07 | 43 |
endothelial cell | 4.23e-07 | 36 |
kidney cell | 4.73e-07 | 17 |
kidney epithelial cell | 4.73e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.73e-18 | 235 |
disease of cellular proliferation | 3.39e-18 | 239 |
hematologic cancer | 1.05e-10 | 51 |
immune system cancer | 1.05e-10 | 51 |
organ system cancer | 1.87e-10 | 137 |
cell type cancer | 3.59e-09 | 143 |
leukemia | 3.46e-08 | 39 |
carcinoma | 4.67e-08 | 106 |
myeloid leukemia | 4.58e-07 | 31 |