FFCP PHASE1:Hg19::chr2:148778934..148778965,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:148778934..148778965,+ to FFCP PHASE1:Hg19::chr2:148778934..148778965,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55777 | |EntrezGene=55777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20444 | |HGNC=20444 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENST00000473478_5end | |||
|cluster_id=chr2:148778934..148778965,+ | |||
|description=CAGE_peak_6_at_MBD5_5end | |||
|id=chr2:148778934..148778965,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.38e-16!57;UBERON:0005068!1.38e-16!57;UBERON:0006241!1.38e-16!57;UBERON:0007135!1.38e-16!57;UBERON:0007023!4.10e-16!115;UBERON:0001017!3.02e-15!82;UBERON:0003080!9.70e-15!42;UBERON:0000955!2.12e-14!69;UBERON:0006238!2.12e-14!69;UBERON:0002780!2.18e-14!41;UBERON:0001890!2.18e-14!41;UBERON:0006240!2.18e-14!41;UBERON:0002616!3.49e-14!59;UBERON:0005743!5.89e-14!86;UBERON:0000073!3.10e-13!94;UBERON:0001016!3.10e-13!94;UBERON:0002020!2.73e-11!34;UBERON:0003528!2.73e-11!34;UBERON:0001893!3.64e-11!34;UBERON:0002791!5.00e-11!33;UBERON:0002346!5.85e-11!90;UBERON:0003075!7.09e-11!86;UBERON:0007284!7.09e-11!86;UBERON:0001869!9.59e-11!32;UBERON:0002619!9.98e-11!22;UBERON:0001950!1.06e-09!20;UBERON:0000956!3.30e-09!25;UBERON:0000203!3.30e-09!25;UBERON:0003056!3.45e-09!61;UBERON:0000153!9.32e-08!129;UBERON:0007811!9.32e-08!129;UBERON:0000033!6.26e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.57e-17;22!UBERON:0001950;2.04e-16;20!UBERON:0002791;3.12e-16;32!UBERON:0001869;2.30e-15;32!UBERON:0000956;8.89e-15;25!UBERON:0000203;8.89e-15;25!UBERON:0003528;9.13e-15;34!UBERON:0002020;9.13e-15;34!UBERON:0002780;1.09e-13;41!UBERON:0001890;1.09e-13;41!UBERON:0001893;1.73e-13;34!UBERON:0000073;2.93e-11;53!UBERON:0002616;2.93e-11;53!UBERON:0001017;1.52e-08;75!UBERON:0002021;1.92e-08;5!UBERON:0001016;1.35e-07;83!UBERON:0000955;6.68e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.80e-21,56;UBERON:0005068,3.80e-21,56;UBERON:0006241,3.80e-21,56;UBERON:0007135,3.80e-21,56;UBERON:0000073,9.35e-19,53;UBERON:0002616,9.35e-19,53;UBERON:0001017,1.85e-17,81;UBERON:0003528,3.55e-17,34;UBERON:0002020,3.55e-17,34;UBERON:0002780,4.30e-17,41;UBERON:0001890,4.30e-17,41;UBERON:0003080,4.30e-17,41;UBERON:0006240,4.30e-17,41;UBERON:0002619,8.76e-17,22;UBERON:0002791,2.25e-16,32;UBERON:0001869,2.25e-16,32;UBERON:0001950,7.13e-16,20;UBERON:0000955,8.45e-16,68;UBERON:0006238,8.45e-16,68;UBERON:0001893,3.50e-15,34;UBERON:0001016,5.85e-15,89;UBERON:0000956,1.93e-14,25;UBERON:0000203,1.93e-14,25;UBERON:0003075,1.96e-13,82;UBERON:0007284,1.96e-13,82;UBERON:0002346,1.71e-12,86;UBERON:0007023,2.35e-11,114;UBERON:0003056,4.70e-11,61;UBERON:0010371,3.82e-10,104;UBERON:0002021,5.52e-08,5;UBERON:0011216,4.79e-07,223 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.273748850145768,0.125542639594803,0.458480434487708,0.410502947249729,0.393553906568396,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0.309868802321207,0.284338464974843,0.293600439334847,0,0.200544447470142,0,0.671746422719773,0.971680998056939,0.257575567634187,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0.188242339542605,0.545812300115692,0,0.306083892370903,0,0,0,0.398927315243264,0,0,0,0,0.251248665256743,0,0,0,0,0,0.422510572623884,0.212604299965044,0,0.112328631146495,0.450530678524519,0.16072558669708,0,0.19891667719909,0.182664153764634,0,1.09227722252426,1.77901850772711,0,0.400395987036012,1.14950487990897,0.661044872784862,0.954053754535364,1.1384259382189,1.17447437874188,0.764546456250458,0,1.12101712596307,0.263384084775077,1.57367816091066,0.786021525498329,0.616804496998528,0.668745981562712,0.651844533267181,0.946895611469467,0,0,0,0,0.541607727530031,0.128091319725675,0.390178042679635,0.164437904603676,0,0.289803085735052,0.889719378972363,1.07016331235885,1.04535523804977,0.226618685395132,0,1.71813722741315,0.506039384039006,0.637130828648193,1.30216690771284,0.950452044448374,1.20460095262218,1.79181255616186,0,0.236777252044017,0,1.20964045934839,0.534880391567015,1.44824403882799,2.43806866313962,0,0.12786256184353,0.361439152384566,0,0.579386075843295,0.795285947051099,0,0.283604451492204,0,0.087834785693126,0.654895377488563,0,0,0,0,0.132957960518865,0.476981248610684,0.571994910780128,0,0,0,0,0.56530794192401,0,0,0,0,0,0.33472061276467,0.402829317109147,0.760272105718513,0.488124115096339,0.367663080345869,0,0.17859945656816,0.898117490504679,0,0,0.949265659568129,0,1.31780417436063,0,0,0,0.379891534993739,0.397227542439656,0.573673241497627,0,0,0,0,0,0.404132016209064,0.326923806226917,0.302714855289863,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0.61246251376468,0.122834317311768,0.309977343527296,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0,0.226864366320042,0.717558542755448,0.640672166455702,0.211931901159562,0.900273288253207,0.206105058476878,0.257640540045629,0.18611685633159,0.337552664482532,0.292311015483596,0.504867548488229,0.184099797284599,0.969876340912871,0,0.302256294682921,0,0.193260853163297,0.545492241181669,0.286804595389004,0.365921118388786,0.397589304964456,0.813357600086629,0.621966330092223,0.756962552626885,0,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.201057944823262,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.463721619900307,0.587043471179108,0,0.925971025153221,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0.383382679165211,0,1.14462964217194,0.621984346622316,0.144119953416961,0.75745460055828,0.63497894292169,0.381988425558278,1.17217447210047,0,0,0.300343057843917,1.14330573052231,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,0.672510863961164,0.788123040807709,1.07813787429759,0.77005821767849,1.01637849688985,0,0,0.335032530668698,1.27587750330633,0.749007023947182,0,0.414415513436035,0.36807447515742,0,0.271265023699736,0.415941723061614,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0.434418072340414,0.783204629850962,0.686286847621712,1.03384013061444,0.215714200818617,0.533637789017222,0,0,0.30239029332968,0.248107807818777,0.920771839728375,0.561320188866147,0.128139149255701,0.511707249066704,0,0,0,0.355123450626254,0.246381468041427,0.519254429183621,0,0.483437798366489,0.40101294060657,0.0920809889358963,0.229628896329213,0.182091168006717,0.655622074797121,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0.812839312631559,0,0,0,0.223874754722178,0,0.784306353074702,0,0,0,0.721287081534056,0,0.247528499761764,0,0,1.6068392984416,0.193341436584244,0.616194468458578,0,0,0.429680979473094,0.580066775656914,0.170453254832202,0.178064071293475,0,0.192190067365106,1.02090169995667,0,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.286249773483982,0,1.2655176988749,0.38126038784765,0,0,0.318203247925937,0,0.359744915166629,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,0,0,0,0.384888450902048,0,0,0.282431402330337,0,0,0,0,1.01489521846434,0,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0.854592569019785,0.962479855263359,0,0.185803175125719,0.28853842595289,0.569134746787313,0,0.199579371432817,0.1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| ||
|short_description=p6@MBD5 | |||
}} | }} |
Latest revision as of 09:49, 17 September 2015
Short description: | p6@MBD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MBD5_5end |
Coexpression cluster: | NA |
Association with transcript: | -42bp_to_ENST00000473478_5end |
EntrezGene: | MBD5 |
HGNC: | 20444 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 3.80e-21 | 56 |
neural rod | 3.80e-21 | 56 |
future spinal cord | 3.80e-21 | 56 |
neural keel | 3.80e-21 | 56 |
regional part of nervous system | 9.35e-19 | 53 |
regional part of brain | 9.35e-19 | 53 |
central nervous system | 1.85e-17 | 81 |
brain grey matter | 3.55e-17 | 34 |
gray matter | 3.55e-17 | 34 |
regional part of forebrain | 4.30e-17 | 41 |
forebrain | 4.30e-17 | 41 |
anterior neural tube | 4.30e-17 | 41 |
future forebrain | 4.30e-17 | 41 |
regional part of cerebral cortex | 8.76e-17 | 22 |
regional part of telencephalon | 2.25e-16 | 32 |
cerebral hemisphere | 2.25e-16 | 32 |
neocortex | 7.13e-16 | 20 |
brain | 8.45e-16 | 68 |
future brain | 8.45e-16 | 68 |
telencephalon | 3.50e-15 | 34 |
nervous system | 5.85e-15 | 89 |
cerebral cortex | 1.93e-14 | 25 |
pallium | 1.93e-14 | 25 |
neural plate | 1.96e-13 | 82 |
presumptive neural plate | 1.96e-13 | 82 |
neurectoderm | 1.71e-12 | 86 |
adult organism | 2.35e-11 | 114 |
pre-chordal neural plate | 4.70e-11 | 61 |
ecto-epithelium | 3.82e-10 | 104 |
occipital lobe | 5.52e-08 | 5 |
organ system subdivision | 4.79e-07 | 223 |