FFCP PHASE1:Hg19::chr5:179765890..179765911,-: Difference between revisions
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|id=chr5:179765890..179765911,-
|short_description=p10@GFPT2
|description=CAGE_peak_10_at_GFPT2_5end
|association_with_transcript=-289bp_to_BT009818,CU673990,DQ8921...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9945 | |EntrezGene=9945 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4242 | |HGNC=4242 | ||
|TSSclassifier=strong | |||
|UniProt=O94808 | |UniProt=O94808 | ||
|association_with_transcript=-289bp_to_BT009818,CU673990,DQ892176,DQ895371_5end | |||
|cluster_id=chr5:179765890..179765911,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_10_at_GFPT2_5end | |||
|id=chr5:179765890..179765911,- | |||
|ontology_enrichment_celltype=CL:0000080!6.23e-17!6;CL:0000039!5.19e-07!7;CL:0000586!5.19e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002262;6.30e-21;2!CL:1000398;6.30e-21;2!CL:0000039;6.21e-07;7!CL:0000586;6.21e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,5.70e-21,2;CL:1000398,5.70e-21,2;CL:0000039,6.39e-07,7;CL:0000586,6.39e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007190!1.32e-11!1;UBERON:0002372!1.47e-11!1;UBERON:0001961!1.47e-11!1;UBERON:0001744!1.47e-11!1;UBERON:0001735!1.47e-11!1;UBERON:0002331!2.20e-10!10;UBERON:0000358!2.20e-10!10;UBERON:0000307!2.20e-10!10;UBERON:0000091!2.20e-10!10;UBERON:0000087!2.20e-10!10;UBERON:0007806!2.20e-10!10;UBERON:0008780!2.20e-10!10;UBERON:0005728!2.20e-10!10;UBERON:0000178!4.40e-07!15;UBERON:0000179!4.40e-07!15;UBERON:0000463!4.40e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.40e-36;10!UBERON:0000178;1.40e-24;15!UBERON:0000179;1.40e-24;15!UBERON:0000463;1.40e-24;15!UBERON:0001281;6.30e-21;2!UBERON:0003497;6.30e-21;2!UBERON:0003909;6.30e-21;2!UBERON:0003835;6.30e-21;2!UBERON:0000478;1.02e-15;24!UBERON:0001280;1.96e-14;3!UBERON:0004647;1.96e-14;3!UBERON:0002390;4.20e-12;32!UBERON:0000922;1.86e-11;49!UBERON:0003513;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.40e-36,10;UBERON:0000358,2.40e-36,10;UBERON:0000307,2.40e-36,10;UBERON:0000091,2.40e-36,10;UBERON:0000087,2.40e-36,10;UBERON:0007010,2.40e-36,10;UBERON:0007806,2.40e-36,10;UBERON:0008780,2.40e-36,10;UBERON:0005728,2.40e-36,10;UBERON:0000178,1.40e-24,15;UBERON:0000179,1.40e-24,15;UBERON:0000463,1.40e-24,15;UBERON:0001281,5.70e-21,2;UBERON:0003497,5.70e-21,2;UBERON:0003909,5.70e-21,2;UBERON:0003835,5.70e-21,2;UBERON:0000478,1.02e-15,24;UBERON:0001280,1.83e-14,3;UBERON:0004647,1.83e-14,3;UBERON:0005171,1.83e-14,3;UBERON:0002394,6.78e-08,6;UBERON:0003928,6.78e-08,6;UBERON:0003513,6.04e-07,7 | |||
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|short_description=p10@GFPT2 | |||
}} | }} |
Latest revision as of 10:27, 17 September 2015
Short description: | p10@GFPT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GFPT2_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -289bp_to_BT009818, CU673990, DQ892176, DQ895371_5end |
EntrezGene: | GFPT2 |
HGNC: | 4242 |
UniProt: | O94808 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 5.70e-21 | 2 |
endothelial cell of hepatic sinusoid | 5.70e-21 | 2 |
germ line cell | 6.39e-07 | 7 |
germ cell | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.40e-36 | 10 |
blastocyst | 2.40e-36 | 10 |
blastula | 2.40e-36 | 10 |
bilaminar disc | 2.40e-36 | 10 |
inner cell mass | 2.40e-36 | 10 |
cleaving embryo | 2.40e-36 | 10 |
connecting stalk | 2.40e-36 | 10 |
inner cell mass derived epiblast | 2.40e-36 | 10 |
extraembryonic mesoderm | 2.40e-36 | 10 |
blood | 1.40e-24 | 15 |
haemolymphatic fluid | 1.40e-24 | 15 |
organism substance | 1.40e-24 | 15 |
hepatic sinusoid | 5.70e-21 | 2 |
abdomen blood vessel | 5.70e-21 | 2 |
sinusoid | 5.70e-21 | 2 |
abdominal segment blood vessel | 5.70e-21 | 2 |
extraembryonic structure | 1.02e-15 | 24 |
liver parenchyma | 1.83e-14 | 3 |
liver lobule | 1.83e-14 | 3 |
hepatic duct | 1.83e-14 | 3 |
bile duct | 6.78e-08 | 6 |
digestive system duct | 6.78e-08 | 6 |
trunk blood vessel | 6.04e-07 | 7 |