FFCP PHASE1:Hg19::chr3:196366555..196366572,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375387 | |EntrezGene=375387 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24613 | |HGNC=24613 | ||
|TSSclassifier=strong | |||
|UniProt=Q86YC3 | |UniProt=Q86YC3 | ||
|association_with_transcript=0bp_to_ENST00000328557_5end | |association_with_transcript=0bp_to_ENST00000328557_5end | ||
|cluster_id=chr3:196366555..196366572,+ | |||
|coexpression_cluster_id=C2737 | |coexpression_cluster_id=C2737 | ||
|description=CAGE_peak_2_at_LRRC33_5end | |description=CAGE_peak_2_at_LRRC33_5end | ||
|id=chr3:196366555..196366572,+ | |id=chr3:196366555..196366572,+ | ||
|ontology_enrichment_celltype=CL:0000037!9.00e-72!172;CL:0000566!9.00e-72!172;CL:0002032!3.00e-67!165;CL:0000837!3.00e-67!165;CL:0000988!3.75e-67!182;CL:0000738!9.13e-50!140;CL:0000763!3.47e-49!112;CL:0000049!3.47e-49!112;CL:0002031!2.40e-44!124;CL:0002087!1.30e-42!119;CL:0000557!3.60e-29!71;CL:0000839!2.81e-28!70;CL:0000766!2.29e-27!76;CL:0002009!3.03e-26!65;CL:0002194!1.71e-25!63;CL:0000576!1.71e-25!63;CL:0000040!1.71e-25!63;CL:0000559!1.71e-25!63;CL:0002057!3.43e-21!42;CL:0000860!2.65e-18!45;CL:0000542!3.73e-15!53;CL:0000051!3.73e-15!53;CL:0000838!1.41e-14!52;CL:0000134!4.24e-11!358;CL:0002320!8.28e-10!365;CL:0000219!3.28e-09!390;CL:0000945!1.51e-07!24;CL:0000826!1.51e-07!24;CL:0000084!1.57e-07!25;CL:0000827!1.57e-07!25;CL:0000451!2.26e-07!10 | |ontology_enrichment_celltype=CL:0000037!9.00e-72!172;CL:0000566!9.00e-72!172;CL:0002032!3.00e-67!165;CL:0000837!3.00e-67!165;CL:0000988!3.75e-67!182;CL:0000738!9.13e-50!140;CL:0000763!3.47e-49!112;CL:0000049!3.47e-49!112;CL:0002031!2.40e-44!124;CL:0002087!1.30e-42!119;CL:0000557!3.60e-29!71;CL:0000839!2.81e-28!70;CL:0000766!2.29e-27!76;CL:0002009!3.03e-26!65;CL:0002194!1.71e-25!63;CL:0000576!1.71e-25!63;CL:0000040!1.71e-25!63;CL:0000559!1.71e-25!63;CL:0002057!3.43e-21!42;CL:0000860!2.65e-18!45;CL:0000542!3.73e-15!53;CL:0000051!3.73e-15!53;CL:0000838!1.41e-14!52;CL:0000134!4.24e-11!358;CL:0002320!8.28e-10!365;CL:0000219!3.28e-09!390;CL:0000945!1.51e-07!24;CL:0000826!1.51e-07!24;CL:0000084!1.57e-07!25;CL:0000827!1.57e-07!25;CL:0000451!2.26e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000576;3.40e-21;48!CL:0000763;5.40e-21;100!CL:0000473;1.09e-20;39!CL:0000234;1.09e-20;39!CL:0000766;2.28e-19;69!CL:0000860;7.81e-19;33!CL:0002057;7.81e-19;33!CL:0000988;8.23e-15;177!CL:0002087;1.71e-14;104!CL:0000738;1.98e-14;136!CL:0000451;1.81e-10;10!CL:0000990;3.51e-09;8!CL:0000235;6.27e-08;6!CL:0000542;1.01e-07;53!CL:0000945;1.51e-07;24!CL:0002393;5.55e-07;6!CL:0002397;5.55e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.96e-99,168;CL:0000988,3.34e-94,177;CL:0002032,4.51e-92,161;CL:0000837,4.51e-92,161;CL:0000763,8.39e-77,108;CL:0000049,8.39e-77,108;CL:0000738,2.84e-67,136;CL:0002031,6.96e-58,120;CL:0002087,1.86e-56,115;CL:0000557,6.38e-46,67;CL:0000839,1.62e-44,66;CL:0000766,3.63e-44,72;CL:0002009,9.48e-43,61;CL:0002194,1.32e-41,59;CL:0000576,1.32e-41,59;CL:0000040,1.32e-41,59;CL:0000559,1.32e-41,59;CL:0000473,1.44e-34,48;CL:0000234,1.44e-34,48;CL:0000860,3.06e-28,42;CL:0002057,3.06e-28,42;CL:0000134,3.92e-23,354;CL:0002320,7.37e-22,361;CL:0000219,1.71e-19,386;CL:0000034,4.86e-15,441;CL:0000542,3.65e-14,53;CL:0000051,3.65e-14,53;CL:0000838,2.06e-13,52;CL:0000048,4.22e-13,427;CL:0000723,2.19e-12,433;CL:0000451,1.90e-10,10;CL:0002393,2.20e-09,9;CL:0002397,2.20e-09,9;CL:0000990,3.70e-09,8;CL:0000235,5.84e-08,6;CL:0000945,1.78e-07,24;CL:0000826,1.78e-07,24;CL:0000084,7.31e-07,25;CL:0000827,7.31e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000049;4.73e-21;108!CL:0002057;1.32e-20;42!CL:0000051;1.01e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!2.24e-23!51;DOID:0060083!2.24e-23!51;DOID:1240!3.40e-23!39;DOID:8692!1.24e-19!31 | |ontology_enrichment_disease=DOID:2531!2.24e-23!51;DOID:0060083!2.24e-23!51;DOID:1240!3.40e-23!39;DOID:8692!1.24e-19!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;7.95e-27;31!DOID:1240;2.95e-25;39!DOID:2531;3.25e-20;51!DOID:0060083;3.25e-20;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.75e-34,39;DOID:2531,4.07e-33,51;DOID:0060083,4.07e-33,51;DOID:8692,9.75e-28,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.75e-34!102;UBERON:0003061!2.75e-34!102;UBERON:0002193!4.71e-31!112;UBERON:0002371!2.76e-25!80;UBERON:0001474!3.70e-21!86;UBERON:0002405!1.77e-17!115;UBERON:0004765!1.88e-13!101;UBERON:0001434!1.88e-13!101;UBERON:0003081!6.03e-10!216;UBERON:0002384!4.13e-09!375 | |ontology_enrichment_uberon=UBERON:0002390!2.75e-34!102;UBERON:0003061!2.75e-34!102;UBERON:0002193!4.71e-31!112;UBERON:0002371!2.76e-25!80;UBERON:0001474!3.70e-21!86;UBERON:0002405!1.77e-17!115;UBERON:0004765!1.88e-13!101;UBERON:0001434!1.88e-13!101;UBERON:0003081!6.03e-10!216;UBERON:0002384!4.13e-09!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.63e-09;15!UBERON:0000179;1.63e-09;15!UBERON:0000463;1.63e-09;15!UBERON:0002390;1.77e-08;32 | |||
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| ||
|short_description=p2@LRRC33 | |short_description=p2@LRRC33 | ||
}} | }} |
Latest revision as of 15:52, 17 September 2015
Short description: | p2@LRRC33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRC33_5end |
Coexpression cluster: | C2737_Monocytederived_granulocyte_chronic_Dendritic_Basophils_Macrophage_CD14 |
Association with transcript: | 0bp_to_ENST00000328557_5end |
EntrezGene: | LRRC33 |
HGNC: | 24613 |
UniProt: | Q86YC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.85e-55 | 98 |
blood island | 1.85e-55 | 98 |
hemolymphoid system | 1.09e-48 | 108 |
bone marrow | 4.51e-41 | 76 |
immune system | 1.48e-39 | 93 |
bone element | 2.34e-36 | 82 |
skeletal element | 4.37e-31 | 90 |
skeletal system | 9.59e-26 | 100 |
connective tissue | 1.95e-21 | 371 |
lateral plate mesoderm | 1.78e-15 | 203 |
blood | 1.53e-09 | 15 |
haemolymphatic fluid | 1.53e-09 | 15 |
organism substance | 1.53e-09 | 15 |
musculoskeletal system | 1.26e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.75e-34 | 39 |
hematologic cancer | 4.07e-33 | 51 |
immune system cancer | 4.07e-33 | 51 |
myeloid leukemia | 9.75e-28 | 31 |