FFCP PHASE1:Hg19::chr11:35640893..35640918,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:35640893..35640918,+
|short_description=p6@FJX1
|description=CAGE_peak_6_at_FJX1_5end
|association_with_transcript=-317bp_to_ENST00000532914_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=24147 | |EntrezGene=24147 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17166 | |HGNC=17166 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-317bp_to_ENST00000532914_5end | |||
|cluster_id=chr11:35640893..35640918,+ | |||
|description=CAGE_peak_6_at_FJX1_5end | |||
|id=chr11:35640893..35640918,+ | |||
|ontology_enrichment_celltype=CL:0000220!6.98e-25!246;CL:0002321!3.10e-24!248;CL:0000066!2.20e-20!254;CL:0000222!9.65e-14!119;CL:0000076!5.73e-11!62;CL:0002076!2.07e-10!43;CL:0000548!2.12e-09!679;CL:0000004!2.12e-09!679;CL:0000255!2.12e-09!679;CL:0000012!5.60e-09!682;CL:0000115!2.11e-08!35;CL:0000055!2.53e-08!180;CL:1000497!2.60e-08!18;CL:0002518!2.60e-08!18;CL:0000359!3.87e-08!32;CL:1000449!4.79e-08!16;CL:0002078!5.97e-08!44;CL:0000223!9.96e-08!59;CL:0000183!1.03e-07!59;CL:0000393!1.97e-07!60;CL:0000211!1.97e-07!60;CL:0000680!2.31e-07!57;CL:0000056!2.31e-07!57;CL:0000355!2.31e-07!57;CL:0002368!2.77e-07!13;CL:0002371!3.10e-07!591;CL:0002159!3.81e-07!13;CL:0000144!6.98e-07!625;CL:0000213!7.36e-07!57;CL:0000215!7.36e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.06e-10;4!CL:0000731;2.06e-10;4!CL:0002368;7.33e-09;13!CL:0002595;5.14e-08;5!CL:0002159;5.24e-08;14!CL:1000449;1.86e-07;15!CL:0000359;2.23e-07;32!CL:0002681;3.30e-07;12!CL:0002584;3.30e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.57e-12,253;CL:0002321,8.43e-11,250;CL:0000244,1.86e-10,4;CL:0000731,1.86e-10,4;CL:0002368,3.69e-09,13;CL:0000222,6.56e-08,121;CL:0002159,7.22e-08,14;CL:0002595,8.74e-08,5;CL:0000076,1.29e-07,63;CL:1000449,1.57e-07,15;CL:0002681,2.97e-07,12;CL:0002584,2.97e-07,12;CL:0000359,7.39e-07,32;CL:0002078,9.78e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.78e-23!312;UBERON:0000483!6.33e-23!309;UBERON:0004111!2.27e-17!241;UBERON:0000477!9.96e-17!286;UBERON:0000475!7.00e-14!365;UBERON:0000481!2.31e-13!347;UBERON:0002049!4.08e-13!79;UBERON:0007798!4.08e-13!79;UBERON:0003914!6.58e-13!118;UBERON:0000025!1.07e-12!194;UBERON:0000467!3.80e-12!625;UBERON:0000480!5.45e-12!626;UBERON:0000923!1.12e-11!604;UBERON:0005291!1.12e-11!604;UBERON:0006598!1.12e-11!604;UBERON:0002532!1.12e-11!604;UBERON:0000055!1.57e-11!69;UBERON:0002050!1.60e-11!605;UBERON:0005423!1.60e-11!605;UBERON:0000468!1.60e-11!659;UBERON:0000922!1.79e-11!612;UBERON:0005256!3.42e-11!143;UBERON:0001981!1.04e-10!60;UBERON:0007500!1.04e-10!60;UBERON:0004537!1.04e-10!60;UBERON:0006965!1.04e-10!60;UBERON:0001637!1.08e-10!42;UBERON:0003509!1.08e-10!42;UBERON:0004572!1.08e-10!42;UBERON:0000490!1.64e-10!138;UBERON:0002100!6.44e-10!216;UBERON:0004535!1.25e-08!110;UBERON:0004573!1.27e-08!33;UBERON:0004571!1.27e-08!33;UBERON:0000486!1.71e-08!82;UBERON:0004872!3.20e-08!84;UBERON:0000914!4.16e-08!83;UBERON:0002329!4.16e-08!83;UBERON:0003077!4.16e-08!83;UBERON:0003059!4.16e-08!83;UBERON:0007282!4.16e-08!83;UBERON:0009618!4.16e-08!83;UBERON:0007285!4.16e-08!83;UBERON:0000353!4.18e-08!17;UBERON:0003104!4.40e-08!238;UBERON:0009142!4.40e-08!238;UBERON:0004211!4.79e-08!16;UBERON:0001285!4.79e-08!16;UBERON:0007684!4.79e-08!16;UBERON:0003220!4.79e-08!16;UBERON:0004208!4.79e-08!16;UBERON:0001009!6.97e-08!113;UBERON:0006554!3.01e-07!44;UBERON:0006555!3.17e-07!17;UBERON:0005103!3.17e-07!17;UBERON:0000083!3.17e-07!17;UBERON:0009201!3.17e-07!17;UBERON:0004819!3.17e-07!17;UBERON:0006553!3.17e-07!17;UBERON:0003074!3.17e-07!17;UBERON:0003060!3.17e-07!17;UBERON:0001008!7.38e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;1.53e-08;7!UBERON:0000365;2.51e-08;5!UBERON:0003834;5.14e-08;5!UBERON:0001533;5.14e-08;5!UBERON:0006554;6.04e-08;30!UBERON:0001008;6.04e-08;30!UBERON:0006555;1.86e-07;15!UBERON:0000353;1.86e-07;15!UBERON:0004819;1.86e-07;15!UBERON:0001285;1.86e-07;15!UBERON:0007684;1.86e-07;15!UBERON:0001225;3.30e-07;12!UBERON:0008987;3.30e-07;12!UBERON:0003914;4.45e-07;74!UBERON:0004573;4.54e-07;33!UBERON:0004571;4.54e-07;33!UBERON:0005910;6.24e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,2.48e-12,306;UBERON:0000119,4.44e-12,309;UBERON:0003513,2.23e-08,7;UBERON:0000365,2.32e-08,5;UBERON:0003914,2.35e-08,117;UBERON:0000055,3.76e-08,68;UBERON:0004573,5.46e-08,33;UBERON:0004571,5.46e-08,33;UBERON:0007500,6.67e-08,59;UBERON:0001981,6.67e-08,59;UBERON:0004537,6.67e-08,59;UBERON:0006965,6.67e-08,59;UBERON:0003834,8.74e-08,5;UBERON:0001533,8.74e-08,5;UBERON:0004211,1.57e-07,15;UBERON:0009773,1.57e-07,15;UBERON:0001231,1.57e-07,15;UBERON:0001285,1.57e-07,15;UBERON:0007684,1.57e-07,15;UBERON:0004208,1.57e-07,15;UBERON:0000353,1.59e-07,15;UBERON:0002049,1.67e-07,78;UBERON:0007798,1.67e-07,78;UBERON:0001225,2.97e-07,12;UBERON:0008987,2.97e-07,12;UBERON:0006555,5.45e-07,16;UBERON:0004819,5.45e-07,16;UBERON:0005910,5.85e-07,6;UBERON:0001637,8.19e-07,42;UBERON:0003509,8.19e-07,42;UBERON:0004572,8.19e-07,42;UBERON:0000486,9.80e-07,83 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0.436882744260345,0.791300934685361,0.247532705920093,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0,0.251085279189606,0,0,0.0787107813136792,0,0,0,2.75826367343678,1.8072355126695,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.378139268656271,0.221729397462564,0.43917392846563,0.130979075497713,2.5500670180478,1.11235332835329,0,0,0,0,0,0,0.39752481473341,1.72046919021225,0.694281003215189,1.13061588384802,0.419499436209906,0.275118041940067,0.626984899610432,0,1.06729878806013,1.00416183829401,0,1.52054421143703,2.68468263302986,0,0.81014194788176,0.446498641420399,0,0.337834441449967,0,2.84779697870439,0.916008719652036,0,0,2.61656431285521,0,0.506522046658319,0.662045904066094,0,0.709336764396714,0.560677600142307,1.06748995729705,0.24666754841716,1.24484414159907,0.269421344139376,0.326923806226917,0.151357427644931,0,0.937285727335186,1.24864030732128,0,1.79338416662161,0.587172493218824,0.485618833104395,0.421352420106746,0.408308342509787,0.61417158655884,0.413303124703062,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0.375355559615893,1.10825646193673,0,0.30648779579902,0,0.453728732640084,0,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0.201504196455281,0,0.773043412653187,0.545492241181669,0.573609190778008,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0.337169380156203,0,0.110293972732394,0,0,0,0,0,0.738155454624648,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0,0,1.53650399572076,1.1240175325762,1.20634766893957,0.925884451585296,0.325808305310325,0,0,0.811512834825538,0.352226082707465,0.433099343283221,0.462985512576611,0.570762456703795,0,0.858486162094873,0,0,0,3.74935335947108,0.839910640994298,0.850650583454319,0.716468181622786,1.74380363108377,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,1.80980402060889,0,0.845302752556,0.797814349754612,4.16029747645464,0.514414748524284,0,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.718874566474748,0,0,1.30303176000821,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0.500170521059677,1.62759014219841,0,0.535286966391485,1.10391690523754,0.234282829985426,0,2.27407504055985,1.03473071292505,0,0,0.260650843404249,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,1.48418066444991,0.154209693802656,0.532685175939381,0.657017248110473,0,0.581051892299796,0.120859449591622,2.6065841139427,0.552485933615378,0.229628896329213,0.728364672026868,0.393373244878272,1.35359883872224,0.616122696835318,0.784349769176855,1.46139224653261,0.422206515571503,4.54933536283586,0.850468526382578,0.863663664408557,3.08454505380579,0.270946437543853,1.00337954770971,0.254876273045038,1.66215201785745,1.79099803777743,0,0,0.256450125116389,0,0,0,0.183138929636687,0.082509499920588,0.574265537996172,1.30012049207304,0,0.386682873168488,0.462145851343933,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,1.98341898433174,1.92190067365106,0.382838137483752,1.0115778085555,2.32422774648643,1.25924938732256,1.3940745403212,0.308033580176089,1.06461206063404,0,0.37064843820784,0.429374660225974,0.372158369359667,0.632758849437452,0.190630193923825,1.535386747868,0,0.95460974377781,0,0,0,0.117812402345686,1.01091240786658,3.17020642346017,0.421258456238981,0,1.21856744815642,1.05650146756755,0.545999645631943,0,0,0,1.32687795048244,1.31535265576129,1.15755106853338,0,0.405820753925408,0.92947049429925,1.12678241012897,0,0.0982490410131212,0.7133421029625,0,0,0.329294892959902,0.379473173765715,2.0996083214699,0.769776901804097,2.68120910214315,2.17781969722645,0,1.29151611801369,1.68471475667626,2.66058092122005,1.1486170010348,0,0,0,0,0,0,0,0,0,0,4.6557641036396,0,0.28853842595289,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0.445234820091624,0,0,0,0,0.251932747854276,1.53403023753232,0,0,0.808815160325942,0.537063524026827,0,0,0,0,0,0.834912883456661,0,0,0.174919999992391,0,1.93448862085349,0,0.472775363535873,0,0,0,0,0,0,0.331737779793674,1.18219047581419,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0.366390373607449,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0.979396848954886,0,0.216388639742091,0,0,0,0,0,0.104421949505455,0.202203398942031,0,1.1713222286267,0,0.782658475728359,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0.520679215005393,0.195984794828755,2.0023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| ||
|short_description=p6@FJX1 | |||
}} | }} |
Latest revision as of 20:58, 17 September 2015
Short description: | p6@FJX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FJX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -317bp_to_ENST00000532914_5end |
EntrezGene: | FJX1 |
HGNC: | 17166 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.57e-12 | 253 |
embryonic cell | 8.43e-11 | 250 |
transitional epithelial cell | 1.86e-10 | 4 |
urothelial cell | 1.86e-10 | 4 |
respiratory epithelial cell | 3.69e-09 | 13 |
mesodermal cell | 6.56e-08 | 121 |
general ecto-epithelial cell | 7.22e-08 | 14 |
smooth muscle cell of the subclavian artery | 8.74e-08 | 5 |
squamous epithelial cell | 1.29e-07 | 63 |
epithelial cell of nephron | 1.57e-07 | 15 |
kidney cortical cell | 2.97e-07 | 12 |
renal cortical epithelial cell | 2.97e-07 | 12 |
vascular associated smooth muscle cell | 7.39e-07 | 32 |
meso-epithelial cell | 9.78e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
epithelium | 2.48e-12 | 306 |
cell layer | 4.44e-12 | 309 |
trunk blood vessel | 2.23e-08 | 7 |
urothelium | 2.32e-08 | 5 |
epithelial tube | 2.35e-08 | 117 |
vessel | 3.76e-08 | 68 |
systemic artery | 5.46e-08 | 33 |
systemic arterial system | 5.46e-08 | 33 |
epithelial tube open at both ends | 6.67e-08 | 59 |
blood vessel | 6.67e-08 | 59 |
blood vasculature | 6.67e-08 | 59 |
vascular cord | 6.67e-08 | 59 |
thoracic segment blood vessel | 8.74e-08 | 5 |
subclavian artery | 8.74e-08 | 5 |
nephron epithelium | 1.57e-07 | 15 |
renal tubule | 1.57e-07 | 15 |
nephron tubule | 1.57e-07 | 15 |
nephron | 1.57e-07 | 15 |
uriniferous tubule | 1.57e-07 | 15 |
nephrogenic mesenchyme | 1.57e-07 | 15 |
parenchyma | 1.59e-07 | 15 |
vasculature | 1.67e-07 | 78 |
vascular system | 1.67e-07 | 78 |
cortex of kidney | 2.97e-07 | 12 |
renal parenchyma | 2.97e-07 | 12 |
excretory tube | 5.45e-07 | 16 |
kidney epithelium | 5.45e-07 | 16 |
transitional epithelium | 5.85e-07 | 6 |
artery | 8.19e-07 | 42 |
arterial blood vessel | 8.19e-07 | 42 |
arterial system | 8.19e-07 | 42 |
multilaminar epithelium | 9.80e-07 | 83 |