FFCP PHASE1:Hg19::chr6:31554612..31554629,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:31554612..31554629,+ to FFCP PHASE1:Hg19::chr6:31554612..31554629,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7940 | |EntrezGene=7940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14189 | |HGNC=14189 | ||
|TSSclassifier=strong | |||
|UniProt=Q5STB1 | |UniProt=Q5STB1 | ||
|association_with_transcript=0bp_to_ENST00000211921,uc003nuq.2_5end | |||
|cluster_id=chr6:31554612..31554629,+ | |||
|description=CAGE_peak_10_at_LST1_5end | |||
|id=chr6:31554612..31554629,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.16e-68!172;CL:0000566!1.16e-68!172;CL:0000988!1.29e-62!182;CL:0002032!3.38e-61!165;CL:0000837!3.38e-61!165;CL:0000738!6.30e-54!140;CL:0002087!4.66e-49!119;CL:0002031!7.65e-46!124;CL:0000763!6.13e-38!112;CL:0000049!6.13e-38!112;CL:0002009!2.79e-27!65;CL:0002057!1.10e-26!42;CL:0000766!2.92e-26!76;CL:0002194!2.51e-25!63;CL:0000576!2.51e-25!63;CL:0000040!2.51e-25!63;CL:0000559!2.51e-25!63;CL:0000860!5.21e-24!45;CL:0000557!1.45e-23!71;CL:0000839!2.83e-22!70;CL:0000838!1.56e-20!52;CL:0000542!6.75e-20!53;CL:0000051!6.75e-20!53;CL:0000134!9.09e-14!358;CL:0002320!7.14e-13!365;CL:0002393!8.93e-11!9;CL:0002397!8.93e-11!9;CL:0000625!1.36e-10!11;CL:0000945!1.37e-10!24;CL:0000826!1.37e-10!24;CL:0000236!1.67e-10!14;CL:0000219!8.15e-10!390;CL:0000084!1.15e-09!25;CL:0000827!1.15e-09!25;CL:0000791!7.70e-09!18;CL:0000789!7.70e-09!18;CL:0002420!7.70e-09!18;CL:0002419!7.70e-09!18;CL:0000790!7.70e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.86e-16;13!CL:0000094;5.96e-10;8!CL:0000576;2.33e-09;48!CL:0000875;3.32e-09;3!CL:0002396;3.32e-09;3!CL:0000763;9.60e-09;100!CL:0000784;1.30e-08;3!CL:0000945;6.24e-08;24!CL:0000451;9.75e-08;10!CL:0000767;1.13e-07;3!CL:0000988;1.85e-07;177!CL:0000738;2.95e-07;136!CL:0002393;4.56e-07;6!CL:0002397;4.56e-07;6!CL:0000226;4.79e-07;3!CL:0000842;4.79e-07;3!CL:0000081;4.89e-07;11!CL:0002087;5.25e-07;104!CL:0000840;9.33e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.74e-48,168;CL:0000988,3.65e-45,177;CL:0002032,9.61e-39,161;CL:0000837,9.61e-39,161;CL:0000738,1.53e-33,136;CL:0000763,1.58e-31,108;CL:0000049,1.58e-31,108;CL:0002087,5.16e-23,115;CL:0002031,1.33e-20,120;CL:0000766,5.73e-18,72;CL:0002009,6.00e-16,61;CL:0000236,4.24e-15,14;CL:0000134,3.19e-14,354;CL:0000557,5.75e-14,67;CL:0002393,1.08e-13,9;CL:0002397,1.08e-13,9;CL:0002320,1.25e-13,361;CL:0002194,1.71e-13,59;CL:0000576,1.71e-13,59;CL:0000040,1.71e-13,59;CL:0000559,1.71e-13,59;CL:0000860,4.71e-12,42;CL:0002057,4.71e-12,42;CL:0000219,1.48e-11,386;CL:0000839,1.76e-11,66;CL:0000094,4.35e-10,8;CL:0000034,4.69e-10,441;CL:0000473,5.14e-10,48;CL:0000234,5.14e-10,48;CL:0000875,3.33e-09,3;CL:0002396,3.33e-09,3;CL:0000048,4.70e-09,427;CL:0000723,1.03e-08,433;CL:0000784,1.29e-08,3;CL:0000945,6.42e-08,24;CL:0000826,6.42e-08,24;CL:0000451,8.07e-08,10;CL:0000767,9.24e-08,3;CL:0000838,1.45e-07,52;CL:0000542,2.36e-07,53;CL:0000051,2.36e-07,53;CL:0000081,3.93e-07,11;CL:0000226,4.30e-07,3;CL:0000842,4.30e-07,3;CL:0000840,7.43e-07,5;CL:0001029,7.43e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000049;4.66e-09;108!CL:0002057;1.25e-08;42 | |||
|ontology_enrichment_disease=DOID:1240!3.51e-15!39;DOID:2531!3.98e-15!51;DOID:0060083!3.98e-15!51;DOID:8692!4.48e-15!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.96e-18;31!DOID:1240;4.16e-13;39!DOID:2531;3.86e-08;51!DOID:0060083;3.86e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.47e-19,31;DOID:1240,1.75e-16,39;DOID:2531,4.78e-13,51;DOID:0060083,4.78e-13,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.39e-33!102;UBERON:0003061!3.39e-33!102;UBERON:0002193!2.28e-30!112;UBERON:0002371!2.43e-20!80;UBERON:0001474!8.53e-18!86;UBERON:0002405!5.40e-17!115;UBERON:0004765!1.59e-13!101;UBERON:0001434!1.59e-13!101;UBERON:0002384!4.65e-12!375;UBERON:0000178!5.00e-09!15;UBERON:0000179!5.00e-09!15;UBERON:0000463!5.00e-09!15;UBERON:0004177!2.10e-07!7;UBERON:0007023!6.28e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.65e-13;15!UBERON:0000179;5.65e-13;15!UBERON:0000463;5.65e-13;15!UBERON:0002390;2.18e-11;32!UBERON:0004177;3.48e-08;5!UBERON:0005057;3.48e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.85e-26,98;UBERON:0003061,6.85e-26,98;UBERON:0002193,1.62e-22,108;UBERON:0002405,1.00e-13,93;UBERON:0000178,4.72e-13,15;UBERON:0000179,4.72e-13,15;UBERON:0000463,4.72e-13,15;UBERON:0002371,7.83e-13,76;UBERON:0002384,7.96e-13,371;UBERON:0001474,1.97e-11,82;UBERON:0004765,7.25e-10,90;UBERON:0001434,2.79e-08,100;UBERON:0003081,5.30e-08,203 | |||
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| ||
|short_description=p10@LST1 | |||
}} | }} |
Latest revision as of 22:01, 17 September 2015
Short description: | p10@LST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LST1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000211921, uc003nuq.2_5end |
EntrezGene: | LST1 |
HGNC: | 14189 |
UniProt: | Q5STB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.85e-26 | 98 |
blood island | 6.85e-26 | 98 |
hemolymphoid system | 1.62e-22 | 108 |
immune system | 1.00e-13 | 93 |
blood | 4.72e-13 | 15 |
haemolymphatic fluid | 4.72e-13 | 15 |
organism substance | 4.72e-13 | 15 |
bone marrow | 7.83e-13 | 76 |
connective tissue | 7.96e-13 | 371 |
bone element | 1.97e-11 | 82 |
skeletal element | 7.25e-10 | 90 |
skeletal system | 2.79e-08 | 100 |
lateral plate mesoderm | 5.30e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.47e-19 | 31 |
leukemia | 1.75e-16 | 39 |
hematologic cancer | 4.78e-13 | 51 |
immune system cancer | 4.78e-13 | 51 |