FFCP PHASE1:Hg19::chr11:3876379..3876454,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6786 | |EntrezGene=6786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11386 | |HGNC=11386 | ||
|TSSclassifier=strong | |||
|UniProt=Q13586 | |UniProt=Q13586 | ||
|association_with_transcript=-477bp_to_ENST00000300737_5end | |association_with_transcript=-477bp_to_ENST00000300737_5end | ||
|cluster_id=chr11:3876379..3876454,+ | |||
|description=CAGE_peak_2_at_STIM1_5end | |description=CAGE_peak_2_at_STIM1_5end | ||
|id=chr11:3876379..3876454,+ | |id=chr11:3876379..3876454,+ | ||
|ontology_enrichment_celltype=CL:0000838!6.67e-13!52;CL:0000542!6.73e-13!53;CL:0000051!6.73e-13!53;CL:0000738!4.27e-12!140;CL:0000037!1.67e-09!172;CL:0000566!1.67e-09!172;CL:0000988!3.07e-09!182;CL:0002031!4.68e-09!124;CL:0002087!5.35e-09!119;CL:0000084!1.26e-08!25;CL:0000827!1.26e-08!25;CL:0002032!5.97e-08!165;CL:0000837!5.97e-08!165;CL:0000791!6.11e-08!18;CL:0000789!6.11e-08!18;CL:0002420!6.11e-08!18;CL:0002419!6.11e-08!18;CL:0000790!6.11e-08!18 | |ontology_enrichment_celltype=CL:0000838!6.67e-13!52;CL:0000542!6.73e-13!53;CL:0000051!6.73e-13!53;CL:0000738!4.27e-12!140;CL:0000037!1.67e-09!172;CL:0000566!1.67e-09!172;CL:0000988!3.07e-09!182;CL:0002031!4.68e-09!124;CL:0002087!5.35e-09!119;CL:0000084!1.26e-08!25;CL:0000827!1.26e-08!25;CL:0002032!5.97e-08!165;CL:0000837!5.97e-08!165;CL:0000791!6.11e-08!18;CL:0000789!6.11e-08!18;CL:0002420!6.11e-08!18;CL:0002419!6.11e-08!18;CL:0000790!6.11e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.28e-08;25!CL:0000791;6.48e-08;18!CL:0000789;6.48e-08;18!CL:0002419;6.48e-08;18!CL:0000542;6.83e-08;53 | |ontology_enrichment_celltype_v019=CL:0000084;1.28e-08;25!CL:0000791;6.48e-08;18!CL:0000789;6.48e-08;18!CL:0002419;6.48e-08;18!CL:0000542;6.83e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.84e-14,136;CL:0000838,6.36e-13,52;CL:0000542,6.42e-13,53;CL:0000051,6.42e-13,53;CL:0000037,8.15e-11,168;CL:0000988,1.31e-10,177;CL:0002031,1.48e-10,120;CL:0002087,1.75e-10,115;CL:0002032,3.81e-09,161;CL:0000837,3.81e-09,161;CL:0000084,1.23e-08,25;CL:0000827,1.23e-08,25;CL:0000791,5.98e-08,18;CL:0000789,5.98e-08,18;CL:0002420,5.98e-08,18;CL:0002419,5.98e-08,18;CL:0000790,5.98e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000790;6.48e-08;18!CL:0000051;6.83e-08;53 | |ontology_enrichment_development_v019=CL:0000790;6.48e-08;18!CL:0000051;6.83e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.50e-18!115;UBERON:0001017!8.48e-14!82;UBERON:0001049!2.83e-13!57;UBERON:0005068!2.83e-13!57;UBERON:0006241!2.83e-13!57;UBERON:0007135!2.83e-13!57;UBERON:0005743!8.53e-13!86;UBERON:0002616!1.71e-12!59;UBERON:0000955!1.55e-11!69;UBERON:0006238!1.55e-11!69;UBERON:0002780!1.71e-10!41;UBERON:0001890!1.71e-10!41;UBERON:0006240!1.71e-10!41;UBERON:0001869!2.16e-10!32;UBERON:0003080!2.96e-10!42;UBERON:0001893!5.48e-10!34;UBERON:0000073!7.93e-10!94;UBERON:0001016!7.93e-10!94;UBERON:0002791!1.87e-09!33;UBERON:0002619!5.53e-09!22;UBERON:0002020!9.01e-09!34;UBERON:0003528!9.01e-09!34;UBERON:0000956!1.01e-08!25;UBERON:0000203!1.01e-08!25;UBERON:0003075!1.20e-08!86;UBERON:0007284!1.20e-08!86;UBERON:0001950!1.83e-08!20;UBERON:0000153!5.19e-08!129;UBERON:0007811!5.19e-08!129;UBERON:0003056!3.61e-07!61;UBERON:0002346!4.75e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!2.50e-18!115;UBERON:0001017!8.48e-14!82;UBERON:0001049!2.83e-13!57;UBERON:0005068!2.83e-13!57;UBERON:0006241!2.83e-13!57;UBERON:0007135!2.83e-13!57;UBERON:0005743!8.53e-13!86;UBERON:0002616!1.71e-12!59;UBERON:0000955!1.55e-11!69;UBERON:0006238!1.55e-11!69;UBERON:0002780!1.71e-10!41;UBERON:0001890!1.71e-10!41;UBERON:0006240!1.71e-10!41;UBERON:0001869!2.16e-10!32;UBERON:0003080!2.96e-10!42;UBERON:0001893!5.48e-10!34;UBERON:0000073!7.93e-10!94;UBERON:0001016!7.93e-10!94;UBERON:0002791!1.87e-09!33;UBERON:0002619!5.53e-09!22;UBERON:0002020!9.01e-09!34;UBERON:0003528!9.01e-09!34;UBERON:0000956!1.01e-08!25;UBERON:0000203!1.01e-08!25;UBERON:0003075!1.20e-08!86;UBERON:0007284!1.20e-08!86;UBERON:0001950!1.83e-08!20;UBERON:0000153!5.19e-08!129;UBERON:0007811!5.19e-08!129;UBERON:0003056!3.61e-07!61;UBERON:0002346!4.75e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.76e-09;32!UBERON:0001893;6.01e-09;34!UBERON:0002619;8.02e-09;22!UBERON:0002791;1.56e-08;32!UBERON:0000956;1.78e-08;25!UBERON:0000203;1.78e-08;25!UBERON:0001950;2.77e-08;20!UBERON:0003528;3.92e-08;34!UBERON:0002020;3.92e-08;34!UBERON:0002780;1.26e-07;41!UBERON:0001890;1.26e-07;41!UBERON:0000073;1.86e-07;53!UBERON:0002616;1.86e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0001869;2.76e-09;32!UBERON:0001893;6.01e-09;34!UBERON:0002619;8.02e-09;22!UBERON:0002791;1.56e-08;32!UBERON:0000956;1.78e-08;25!UBERON:0000203;1.78e-08;25!UBERON:0001950;2.77e-08;20!UBERON:0003528;3.92e-08;34!UBERON:0002020;3.92e-08;34!UBERON:0002780;1.26e-07;41!UBERON:0001890;1.26e-07;41!UBERON:0000073;1.86e-07;53!UBERON:0002616;1.86e-07;53 | ||
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| ||
|short_description=p2@STIM1 | |short_description=p2@STIM1 | ||
}} | }} |
Latest revision as of 22:35, 17 September 2015
Short description: | p2@STIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -477bp_to_ENST00000300737_5end |
EntrezGene: | STIM1 |
HGNC: | 11386 |
UniProt: | Q13586 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.84e-14 | 136 |
lymphoid lineage restricted progenitor cell | 6.36e-13 | 52 |
lymphocyte | 6.42e-13 | 53 |
common lymphoid progenitor | 6.42e-13 | 53 |
hematopoietic stem cell | 8.15e-11 | 168 |
hematopoietic cell | 1.31e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 1.48e-10 | 120 |
nongranular leukocyte | 1.75e-10 | 115 |
hematopoietic oligopotent progenitor cell | 3.81e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.81e-09 | 161 |
T cell | 1.23e-08 | 25 |
pro-T cell | 1.23e-08 | 25 |
mature alpha-beta T cell | 5.98e-08 | 18 |
alpha-beta T cell | 5.98e-08 | 18 |
immature T cell | 5.98e-08 | 18 |
mature T cell | 5.98e-08 | 18 |
immature alpha-beta T cell | 5.98e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.71e-18 | 114 |
central nervous system | 5.52e-14 | 81 |
neural tube | 1.59e-13 | 56 |
neural rod | 1.59e-13 | 56 |
future spinal cord | 1.59e-13 | 56 |
neural keel | 1.59e-13 | 56 |
regional part of nervous system | 1.62e-12 | 53 |
regional part of brain | 1.62e-12 | 53 |
brain | 1.03e-11 | 68 |
future brain | 1.03e-11 | 68 |
nervous system | 1.38e-10 | 89 |
regional part of forebrain | 1.66e-10 | 41 |
forebrain | 1.66e-10 | 41 |
anterior neural tube | 1.66e-10 | 41 |
future forebrain | 1.66e-10 | 41 |
cerebral hemisphere | 2.10e-10 | 32 |
telencephalon | 5.33e-10 | 34 |
neural plate | 2.48e-09 | 82 |
presumptive neural plate | 2.48e-09 | 82 |
regional part of telencephalon | 2.73e-09 | 32 |
regional part of cerebral cortex | 5.39e-09 | 22 |
brain grey matter | 8.79e-09 | 34 |
gray matter | 8.79e-09 | 34 |
cerebral cortex | 9.85e-09 | 25 |
pallium | 9.85e-09 | 25 |
neocortex | 1.79e-08 | 20 |
neurectoderm | 1.17e-07 | 86 |
pre-chordal neural plate | 2.20e-07 | 61 |
tissue | 6.12e-07 | 773 |
ecto-epithelium | 8.18e-07 | 104 |