FFCP PHASE1:Hg19::chr11:4115909..4115937,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:4115909..4115937,+
|short_description=p4@RRM1
|description=CAGE_peak_4_at_RRM1_5end
|association_with_transcript=0bp_to_ENST00000532710,NM_001033,uc001lyw...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6240 | |EntrezGene=6240 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10451 | |HGNC=10451 | ||
|TSSclassifier=strong | |||
|UniProt=P23921 | |UniProt=P23921 | ||
|association_with_transcript=0bp_to_ENST00000532710,NM_001033,uc001lyw.3,uc009yeh.1,uc009yei.2,uc010qyc.1_5end | |||
|cluster_id=chr11:4115909..4115937,+ | |||
|description=CAGE_peak_4_at_RRM1_5end | |||
|id=chr11:4115909..4115937,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-21!115;UBERON:0000153!2.93e-11!129;UBERON:0007811!2.93e-11!129;UBERON:0004121!3.67e-11!169;UBERON:0000033!7.99e-11!123;UBERON:0000475!1.39e-10!365;UBERON:0000924!1.39e-10!173;UBERON:0006601!1.39e-10!173;UBERON:0001049!7.97e-10!57;UBERON:0005068!7.97e-10!57;UBERON:0006241!7.97e-10!57;UBERON:0007135!7.97e-10!57;UBERON:0005743!2.58e-09!86;UBERON:0001017!3.68e-09!82;UBERON:0000955!1.00e-08!69;UBERON:0006238!1.00e-08!69;UBERON:0002616!2.40e-08!59;UBERON:0000073!2.70e-08!94;UBERON:0001016!2.70e-08!94;UBERON:0003075!3.94e-08!86;UBERON:0007284!3.94e-08!86;UBERON:0000481!5.24e-08!347;UBERON:0002346!1.98e-07!90;UBERON:0003080!5.58e-07!42;UBERON:0001737!5.74e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.46e-09;9!UBERON:0001557;4.46e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.30e-24,114;UBERON:0001049,3.97e-10,56;UBERON:0005068,3.97e-10,56;UBERON:0006241,3.97e-10,56;UBERON:0007135,3.97e-10,56;UBERON:0010314,1.57e-09,132;UBERON:0001737,3.54e-09,9;UBERON:0011216,3.89e-09,223;UBERON:0010371,5.75e-09,104;UBERON:0004121,7.31e-09,171;UBERON:0000924,7.31e-09,171;UBERON:0006601,7.31e-09,171;UBERON:0000073,1.16e-08,53;UBERON:0002616,1.16e-08,53;UBERON:0003075,1.29e-08,82;UBERON:0007284,1.29e-08,82;UBERON:0000955,1.34e-08,68;UBERON:0006238,1.34e-08,68;UBERON:0001017,2.15e-08,81;UBERON:0002346,1.33e-07,86;UBERON:0001016,6.60e-07,89 | |||
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| ||
|short_description=p4@RRM1 | |||
}} | }} |
Latest revision as of 22:58, 17 September 2015
Short description: | p4@RRM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RRM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000532710, NM_001033, uc001lyw.3, uc009yeh.1, uc009yei.2, uc010qyc.1_5end |
EntrezGene: | RRM1 |
HGNC: | 10451 |
UniProt: | P23921 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.30e-24 | 114 |
neural tube | 3.97e-10 | 56 |
neural rod | 3.97e-10 | 56 |
future spinal cord | 3.97e-10 | 56 |
neural keel | 3.97e-10 | 56 |
structure with developmental contribution from neural crest | 1.57e-09 | 132 |
larynx | 3.54e-09 | 9 |
organ system subdivision | 3.89e-09 | 223 |
ecto-epithelium | 5.75e-09 | 104 |
ectoderm-derived structure | 7.31e-09 | 171 |
ectoderm | 7.31e-09 | 171 |
presumptive ectoderm | 7.31e-09 | 171 |
regional part of nervous system | 1.16e-08 | 53 |
regional part of brain | 1.16e-08 | 53 |
neural plate | 1.29e-08 | 82 |
presumptive neural plate | 1.29e-08 | 82 |
brain | 1.34e-08 | 68 |
future brain | 1.34e-08 | 68 |
central nervous system | 2.15e-08 | 81 |
neurectoderm | 1.33e-07 | 86 |
nervous system | 6.60e-07 | 89 |