FFCP PHASE1:Hg19::chr1:39796871..39796876,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23499 | |EntrezGene=23499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13664 | |HGNC=13664 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PK2 | |UniProt=Q96PK2 | ||
|association_with_transcript=61bp_to_ENST00000289893,uc010oiu.1_5end | |association_with_transcript=61bp_to_ENST00000289893,uc010oiu.1_5end | ||
|cluster_id=chr1:39796871..39796876,+ | |||
|coexpression_cluster_id=C32 | |coexpression_cluster_id=C32 | ||
|description=CAGE_peak_16_at_MACF1_5end | |description=CAGE_peak_16_at_MACF1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.19e-12!115;UBERON:0001049!4.12e-12!57;UBERON:0005068!4.12e-12!57;UBERON:0006241!4.12e-12!57;UBERON:0007135!4.12e-12!57;UBERON:0002780!3.69e-11!41;UBERON:0001890!3.69e-11!41;UBERON:0006240!3.69e-11!41;UBERON:0002020!6.16e-11!34;UBERON:0003528!6.16e-11!34;UBERON:0003080!1.56e-10!42;UBERON:0001893!3.13e-10!34;UBERON:0002791!4.54e-10!33;UBERON:0002616!1.09e-09!59;UBERON:0001869!1.53e-09!32;UBERON:0000955!1.01e-08!69;UBERON:0006238!1.01e-08!69;UBERON:0001017!2.34e-08!82;UBERON:0003075!3.70e-08!86;UBERON:0007284!3.70e-08!86;UBERON:0005743!7.49e-08!86;UBERON:0002346!1.15e-07!90;UBERON:0002619!1.32e-07!22;UBERON:0000073!4.05e-07!94;UBERON:0001016!4.05e-07!94;UBERON:0000956!4.24e-07!25;UBERON:0000203!4.24e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!1.19e-12!115;UBERON:0001049!4.12e-12!57;UBERON:0005068!4.12e-12!57;UBERON:0006241!4.12e-12!57;UBERON:0007135!4.12e-12!57;UBERON:0002780!3.69e-11!41;UBERON:0001890!3.69e-11!41;UBERON:0006240!3.69e-11!41;UBERON:0002020!6.16e-11!34;UBERON:0003528!6.16e-11!34;UBERON:0003080!1.56e-10!42;UBERON:0001893!3.13e-10!34;UBERON:0002791!4.54e-10!33;UBERON:0002616!1.09e-09!59;UBERON:0001869!1.53e-09!32;UBERON:0000955!1.01e-08!69;UBERON:0006238!1.01e-08!69;UBERON:0001017!2.34e-08!82;UBERON:0003075!3.70e-08!86;UBERON:0007284!3.70e-08!86;UBERON:0005743!7.49e-08!86;UBERON:0002346!1.15e-07!90;UBERON:0002619!1.32e-07!22;UBERON:0000073!4.05e-07!94;UBERON:0001016!4.05e-07!94;UBERON:0000956!4.24e-07!25;UBERON:0000203!4.24e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.29e-12;41!UBERON:0001890;3.29e-12;41!UBERON:0002619;1.29e-11;22!UBERON:0002791;5.77e-11;32!UBERON:0003528;7.59e-11;34!UBERON:0002020;7.59e-11;34!UBERON:0000956;5.68e-10;25!UBERON:0000203;5.68e-10;25!UBERON:0001869;1.90e-09;32!UBERON:0000073;2.26e-09;53!UBERON:0002616;2.26e-09;53!UBERON:0001893;6.63e-09;34!UBERON:0001950;1.24e-08;20 | |ontology_enrichment_uberon_v019=UBERON:0002780;3.29e-12;41!UBERON:0001890;3.29e-12;41!UBERON:0002619;1.29e-11;22!UBERON:0002791;5.77e-11;32!UBERON:0003528;7.59e-11;34!UBERON:0002020;7.59e-11;34!UBERON:0000956;5.68e-10;25!UBERON:0000203;5.68e-10;25!UBERON:0001869;1.90e-09;32!UBERON:0000073;2.26e-09;53!UBERON:0002616;2.26e-09;53!UBERON:0001893;6.63e-09;34!UBERON:0001950;1.24e-08;20 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.40e-17,56;UBERON:0005068,8.40e-17,56;UBERON:0006241,8.40e-17,56;UBERON:0007135,8.40e-17,56;UBERON:0000073,1.57e-14,53;UBERON:0002616,1.57e-14,53;UBERON:0002780,5.30e-14,41;UBERON:0001890,5.30e-14,41;UBERON:0003080,5.30e-14,41;UBERON:0006240,5.30e-14,41;UBERON:0003528,1.69e-13,34;UBERON:0002020,1.69e-13,34;UBERON:0002791,1.83e-12,32;UBERON:0002619,1.48e-11,22;UBERON:0001893,1.52e-11,34;UBERON:0000955,3.94e-11,68;UBERON:0006238,3.94e-11,68;UBERON:0003075,8.90e-11,82;UBERON:0007284,8.90e-11,82;UBERON:0001017,1.06e-10,81;UBERON:0001869,1.47e-10,32;UBERON:0001016,4.14e-10,89;UBERON:0002346,5.31e-10,86;UBERON:0000956,6.39e-10,25;UBERON:0000203,6.39e-10,25;UBERON:0003056,3.18e-09,61;UBERON:0007023,3.42e-09,114;UBERON:0001950,1.61e-08,20;UBERON:0010371,4.20e-08,104 | |||
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| ||
|short_description=p16@MACF1 | |short_description=p16@MACF1 | ||
}} | }} |
Latest revision as of 23:44, 17 September 2015
Short description: | p16@MACF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_MACF1_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | 61bp_to_ENST00000289893, uc010oiu.1_5end |
EntrezGene: | MACF1 |
HGNC: | 13664 |
UniProt: | Q96PK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 8.40e-17 | 56 |
neural rod | 8.40e-17 | 56 |
future spinal cord | 8.40e-17 | 56 |
neural keel | 8.40e-17 | 56 |
regional part of nervous system | 1.57e-14 | 53 |
regional part of brain | 1.57e-14 | 53 |
regional part of forebrain | 5.30e-14 | 41 |
forebrain | 5.30e-14 | 41 |
anterior neural tube | 5.30e-14 | 41 |
future forebrain | 5.30e-14 | 41 |
brain grey matter | 1.69e-13 | 34 |
gray matter | 1.69e-13 | 34 |
regional part of telencephalon | 1.83e-12 | 32 |
regional part of cerebral cortex | 1.48e-11 | 22 |
telencephalon | 1.52e-11 | 34 |
brain | 3.94e-11 | 68 |
future brain | 3.94e-11 | 68 |
neural plate | 8.90e-11 | 82 |
presumptive neural plate | 8.90e-11 | 82 |
central nervous system | 1.06e-10 | 81 |
cerebral hemisphere | 1.47e-10 | 32 |
nervous system | 4.14e-10 | 89 |
neurectoderm | 5.31e-10 | 86 |
cerebral cortex | 6.39e-10 | 25 |
pallium | 6.39e-10 | 25 |
pre-chordal neural plate | 3.18e-09 | 61 |
adult organism | 3.42e-09 | 114 |
neocortex | 1.61e-08 | 20 |
ecto-epithelium | 4.20e-08 | 104 |