FFCP PHASE1:Hg19::chr13:76334824..76334862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010thw.1_5end | |association_with_transcript=0bp_to_uc010thw.1_5end | ||
|cluster_id=chr13:76334824..76334862,+ | |||
|coexpression_cluster_id=C3384 | |coexpression_cluster_id=C3384 | ||
|description=CAGE_peak_2_at_LMO7_5end | |description=CAGE_peak_2_at_LMO7_5end | ||
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|ontology_enrichment_celltype=CL:0000066!9.33e-15!254;CL:0000223!1.12e-11!59;CL:0002076!6.35e-10!43 | |ontology_enrichment_celltype=CL:0000066!9.33e-15!254;CL:0000223!1.12e-11!59;CL:0002076!6.35e-10!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.55e-09;42 | |ontology_enrichment_celltype_v019=CL:0002076;6.55e-09;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.22e-15,253;CL:0000223,3.25e-14,58;CL:0002076,2.30e-11,42 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.88e-14;29!UBERON:0006595;3.20e-11;86!UBERON:0001041;1.32e-10;30!CL:0000223;6.77e-08;58!UBERON:0003104;2.81e-07;31 | |ontology_enrichment_development_v019=UBERON:0008947;3.88e-14;29!UBERON:0006595;3.20e-11;86!UBERON:0001041;1.32e-10;30!CL:0000223;6.77e-08;58!UBERON:0003104;2.81e-07;31 | ||
|ontology_enrichment_disease=DOID:305!7.02e-21!106;DOID:0050687!1.33e-10!143 | |ontology_enrichment_disease=DOID:305!7.02e-21!106;DOID:0050687!1.33e-10!143 | ||
|ontology_enrichment_disease_v019=DOID:305;2.62e-07;106!DOID:1749;3.76e-07;14 | |ontology_enrichment_disease_v019=DOID:305;2.62e-07;106!DOID:1749;3.76e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.64e-25,106;DOID:0050687,1.36e-13,143;DOID:1749,4.32e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.30e-26!169;UBERON:0000925!2.30e-26!169;UBERON:0006595!2.30e-26!169;UBERON:0004921!8.97e-25!129;UBERON:0004185!8.97e-25!129;UBERON:0001007!1.44e-23!155;UBERON:0001555!1.44e-23!155;UBERON:0007026!1.44e-23!155;UBERON:0000077!1.01e-21!130;UBERON:0007023!5.25e-20!115;UBERON:0001041!2.87e-18!98;UBERON:0001004!3.57e-15!72;UBERON:0005911!9.49e-15!82;UBERON:0000065!1.66e-14!53;UBERON:0008947!4.83e-12!38;UBERON:0003258!4.83e-12!38;UBERON:0000072!8.91e-11!46;UBERON:0000481!1.50e-10!347;UBERON:0005177!2.66e-10!107;UBERON:0000064!9.68e-10!219;UBERON:0005153!1.53e-09!37;UBERON:0003929!3.75e-09!54;UBERON:0000062!4.07e-09!511;UBERON:0000466!5.81e-09!126;UBERON:0005157!6.93e-09!51;UBERON:0002530!1.56e-07!59;UBERON:0001869!1.69e-07!32;UBERON:0001557!2.61e-07!19;UBERON:0003104!2.61e-07!238;UBERON:0009142!2.61e-07!238;UBERON:0002619!2.84e-07!22;UBERON:0005181!4.48e-07!35;UBERON:0001893!5.75e-07!34;UBERON:0002048!8.31e-07!22;UBERON:0000117!8.31e-07!22;UBERON:0000171!8.31e-07!22;UBERON:0000170!8.31e-07!22;UBERON:0005597!8.31e-07!22;UBERON:0000118!8.31e-07!22;UBERON:0003080!9.34e-07!42;UBERON:0001950!9.88e-07!20 | |ontology_enrichment_uberon=UBERON:0004119!2.30e-26!169;UBERON:0000925!2.30e-26!169;UBERON:0006595!2.30e-26!169;UBERON:0004921!8.97e-25!129;UBERON:0004185!8.97e-25!129;UBERON:0001007!1.44e-23!155;UBERON:0001555!1.44e-23!155;UBERON:0007026!1.44e-23!155;UBERON:0000077!1.01e-21!130;UBERON:0007023!5.25e-20!115;UBERON:0001041!2.87e-18!98;UBERON:0001004!3.57e-15!72;UBERON:0005911!9.49e-15!82;UBERON:0000065!1.66e-14!53;UBERON:0008947!4.83e-12!38;UBERON:0003258!4.83e-12!38;UBERON:0000072!8.91e-11!46;UBERON:0000481!1.50e-10!347;UBERON:0005177!2.66e-10!107;UBERON:0000064!9.68e-10!219;UBERON:0005153!1.53e-09!37;UBERON:0003929!3.75e-09!54;UBERON:0000062!4.07e-09!511;UBERON:0000466!5.81e-09!126;UBERON:0005157!6.93e-09!51;UBERON:0002530!1.56e-07!59;UBERON:0001869!1.69e-07!32;UBERON:0001557!2.61e-07!19;UBERON:0003104!2.61e-07!238;UBERON:0009142!2.61e-07!238;UBERON:0002619!2.84e-07!22;UBERON:0005181!4.48e-07!35;UBERON:0001893!5.75e-07!34;UBERON:0002048!8.31e-07!22;UBERON:0000117!8.31e-07!22;UBERON:0000171!8.31e-07!22;UBERON:0000170!8.31e-07!22;UBERON:0005597!8.31e-07!22;UBERON:0000118!8.31e-07!22;UBERON:0003080!9.34e-07!42;UBERON:0001950!9.88e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;5.85e-12;44!UBERON:0000072;1.28e-09;37!UBERON:0001004;1.64e-08;65!UBERON:0002048;1.87e-08;22!UBERON:0000117;1.87e-08;22!UBERON:0000171;1.87e-08;22!UBERON:0000170;1.87e-08;22!UBERON:0005181;6.41e-08;35!UBERON:0002619;8.45e-08;22!UBERON:0001737;1.04e-07;9!UBERON:0001557;1.04e-07;9!UBERON:0005178;1.15e-07;34!UBERON:0002224;1.15e-07;34!UBERON:0001869;1.58e-07;32!UBERON:0001950;3.66e-07;20!UBERON:0004921;5.81e-07;33!UBERON:0002791;6.14e-07;32!UBERON:0004807;8.04e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000065;5.85e-12;44!UBERON:0000072;1.28e-09;37!UBERON:0001004;1.64e-08;65!UBERON:0002048;1.87e-08;22!UBERON:0000117;1.87e-08;22!UBERON:0000171;1.87e-08;22!UBERON:0000170;1.87e-08;22!UBERON:0005181;6.41e-08;35!UBERON:0002619;8.45e-08;22!UBERON:0001737;1.04e-07;9!UBERON:0001557;1.04e-07;9!UBERON:0005178;1.15e-07;34!UBERON:0002224;1.15e-07;34!UBERON:0001869;1.58e-07;32!UBERON:0001950;3.66e-07;20!UBERON:0004921;5.81e-07;33!UBERON:0002791;6.14e-07;32!UBERON:0004807;8.04e-07;22 | ||
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| ||
|short_description=p2@LMO7 | |short_description=p2@LMO7 | ||
}} | }} |
Latest revision as of 00:10, 18 September 2015
Short description: | p2@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LMO7_5end |
Coexpression cluster: | C3384_lung_amniotic_signet_papillotubular_prostate_gall_Hepatocyte |
Association with transcript: | 0bp_to_uc010thw.1_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.22e-15 | 253 |
endodermal cell | 3.25e-14 | 58 |
endo-epithelial cell | 2.30e-11 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.64e-25 | 106 |
cell type cancer | 1.36e-13 | 143 |
squamous cell carcinoma | 4.32e-07 | 14 |