FFCP PHASE1:Hg19::chr1:160183899..160183921,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:160183899..160183921,+ to FFCP PHASE1:Hg19::chr1:160183899..160183921,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8682 | |EntrezGene=8682 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8822 | |HGNC=8822 | ||
|TSSclassifier=strong | |||
|UniProt=Q14801 | |UniProt=Q14801 | ||
|association_with_transcript=40bp_to_L37385_5end | |||
|cluster_id=chr1:160183899..160183921,+ | |||
|description=CAGE_peak_12_at_PEA15_5end | |||
|id=chr1:160183899..160183921,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.38e-08!180;CL:0000359!1.03e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.51e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.85e-08,32;CL:0000192,4.76e-07,43;CL:0000514,4.76e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.25e-15!57;UBERON:0005068!3.25e-15!57;UBERON:0006241!3.25e-15!57;UBERON:0007135!3.25e-15!57;UBERON:0005743!9.55e-15!86;UBERON:0001017!1.00e-14!82;UBERON:0002616!1.49e-13!59;UBERON:0000073!4.59e-13!94;UBERON:0001016!4.59e-13!94;UBERON:0000468!1.49e-12!659;UBERON:0007023!2.25e-12!115;UBERON:0000467!4.09e-12!625;UBERON:0000480!6.69e-12!626;UBERON:0000955!2.72e-11!69;UBERON:0006238!2.72e-11!69;UBERON:0004111!5.53e-11!241;UBERON:0000477!8.13e-11!286;UBERON:0003080!2.28e-10!42;UBERON:0000025!2.59e-10!194;UBERON:0003075!3.03e-10!86;UBERON:0007284!3.03e-10!86;UBERON:0000475!6.89e-10!365;UBERON:0002780!8.12e-10!41;UBERON:0001890!8.12e-10!41;UBERON:0006240!8.12e-10!41;UBERON:0002050!8.87e-10!605;UBERON:0005423!8.87e-10!605;UBERON:0000483!9.69e-10!309;UBERON:0000923!1.13e-09!604;UBERON:0005291!1.13e-09!604;UBERON:0006598!1.13e-09!604;UBERON:0002532!1.13e-09!604;UBERON:0004121!1.26e-09!169;UBERON:0000119!2.13e-09!312;UBERON:0000922!2.23e-09!612;UBERON:0001893!4.04e-09!34;UBERON:0002020!4.10e-09!34;UBERON:0003528!4.10e-09!34;UBERON:0002791!5.62e-09!33;UBERON:0002346!6.37e-09!90;UBERON:0000924!9.47e-09!173;UBERON:0006601!9.47e-09!173;UBERON:0001869!2.86e-08!32;UBERON:0000033!3.10e-08!123;UBERON:0000153!3.98e-07!129;UBERON:0007811!3.98e-07!129;UBERON:0004872!6.63e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;5.69e-08;32!UBERON:0002780;1.02e-07;41!UBERON:0001890;1.02e-07;41!UBERON:0001016;1.40e-07;83!UBERON:0002619;1.43e-07;22!UBERON:0001869;3.75e-07;32!UBERON:0000073;5.68e-07;53!UBERON:0002616;5.68e-07;53!UBERON:0001950;6.26e-07;20!UBERON:0003528;7.17e-07;34!UBERON:0002020;7.17e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.38e-13,56;UBERON:0005068,4.38e-13,56;UBERON:0006241,4.38e-13,56;UBERON:0007135,4.38e-13,56;UBERON:0001017,4.28e-12,81;UBERON:0001016,4.94e-11,89;UBERON:0000073,2.86e-10,53;UBERON:0002616,2.86e-10,53;UBERON:0002780,9.52e-10,41;UBERON:0001890,9.52e-10,41;UBERON:0003080,9.52e-10,41;UBERON:0006240,9.52e-10,41;UBERON:0003075,4.22e-09,82;UBERON:0007284,4.22e-09,82;UBERON:0010371,5.32e-09,104;UBERON:0002791,1.61e-08,32;UBERON:0007023,2.07e-08,114;UBERON:0002346,2.46e-08,86;UBERON:0000955,4.49e-08,68;UBERON:0006238,4.49e-08,68;UBERON:0003528,8.32e-08,34;UBERON:0002020,8.32e-08,34;UBERON:0001893,8.32e-08,34;UBERON:0000025,2.36e-07,192;UBERON:0002619,2.42e-07,22;UBERON:0001869,3.21e-07,32 | |||
|phase1_expression=2.36181893051724,1.2846031433459,1.83240725324762,0,0.446961094427288,0.872338524100369,0,3.15859936713415,1.56711376919903,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0.994192127183747,0,0.602694528023977,0.730310090387373,1.46379839637152,0.369363174230364,0.612002073732759,0.313454721478088,0.85870796139317,0.410623275218653,0.125542639594803,0,0,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,1.01778767145695,0.377875943688809,0.242584061187816,0,0.822335776043652,0.619412741790207,0,0.256160706529101,0,0,0,0,0.188242339542605,1.91034305040492,0.898893937780338,0.612167784741805,0.320929027076094,1.27867425159808,0,0.199463657621632,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0.425208599930087,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,2.50668955317945,0.724232594804119,0.795285947051099,0.486634870302636,0,0.443458794925128,0.087834785693126,0.654895377488563,0,0,0.324547393654683,0,0.664789802594326,0,0,0,0.993812036833525,0,0,0,0,0.550236083880135,0.626984899610432,0,0,0,0.805658634218294,0.760272105718513,0.488124115096339,0.735326160691737,0,0.357198913136319,0,0.337834441449967,1.53316637465883,1.89853131913626,0.366403487860815,0,0,1.3082821564276,1.98788780678127,1.01304409331664,0,0,0,0.560677600142307,2.1349799145941,0.98667019366864,0.311211035399766,0.67355336034844,0.653847612453835,0.302714855289863,1.15235184896,0.70296429550139,0.624320153660641,0,0.747243402759005,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.413303124703062,0,2.71993622206413,0,0.718618141816238,0,0.250237039743928,0.554128230968366,0.877955241761676,0.612975591598039,2.10333282469236,0.794025282120147,0.179389635688862,0.213557388818567,0.847727604638247,0.300091096084402,0.412210116953756,0,0.558350568994769,0,0.779496041289589,0.504867548488229,0.736399189138395,0.323292113637624,0,0.604512589365842,0.169560592310488,0.386521706326594,0.818238361772504,0.573609190778008,0,0,0,0.207322110030741,0.504641701751257,0,1.56449532329816,0.643240938192885,4.14404764057442,0.464367928031979,0,0.473227200159376,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0,0,0.343135620597051,1.09750285408626,0,0.402115889646523,0,0.651616610620649,0,0,0.34779121492523,0,0.721832238805369,0.925971025153221,0.570762456703795,0,0,0,1.17002132569619,0.743155811443641,0.93733833986777,0.839910640994298,0.425325291727159,0.179117045405697,0,0.383382679165211,0.492663237895943,0.528290604079356,0,0.144119953416961,0.6312121671319,0.190493682876507,2.67391897890794,4.68869788840188,0,0.411309970813294,0.600686115687835,0.285826432630578,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0.845302752556,1.59562869950922,2.08014873822732,0.257207374262142,0,0,0.285955987316295,0,0,0.65147236858747,0,0,0.904318131178758,1.74306691720059,1.49959486773086,0,0.502257091432126,2.10833939483032,0.958499421966331,2.29723871668228,0,0.868687840005475,0.410952645100767,0.358121926479791,0,0.197030760201927,0,0.128343036279748,5.59008173289419,2.60279707715243,0.773288812777695,0.167516265334349,2.55175500661265,0,0,0,0,0.500170521059677,0.542530047399471,0.623912584592421,1.42743191037729,1.41932173530541,0.937131319941706,8.72743689210385,2.27407504055985,0,0,0.368738337083406,1.47702144595741,1.95801157462741,1.02943027143257,0,0.215714200818617,0.320182673410333,1.21251028578504,1.66435439510497,0.604780586659361,2.48107807818777,0.306923946576125,1.12264037773229,1.66580894032411,1.02341449813341,1.44768529029247,0,0.616838775210622,0.887808626565635,0.821271560138091,1.03850885836724,0.581051892299796,0.604297247958111,2.20557117333613,0.644566922551274,0.574072240823034,0.546273504020151,2.62248829918848,0,0.539107359730903,0,0,0.105551628892876,0,0.510281115829547,0,0,0.270946437543853,0.501689773854853,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0,0.656029291399411,0.976135183992909,0.206082023295445,0.366277859273374,0.330037999682352,1.14853107599234,0,1.6068392984416,1.54673149267395,0,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0.340906509664404,0.890320356467374,1.15699440752685,0.192190067365106,0.127612712494584,0.910420027699949,3.71876439437829,0.62962469366128,0.6970372701606,1.23213432070436,3.19383618190213,0.869932992075073,2.22389062924704,0.572499546967965,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0,0,1.56989728039846,0.179872457583315,0.274537029736055,0.117812402345686,2.42618977887979,3.17020642346017,0,0,0.7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| ||
|short_description=p12@PEA15 | |||
}} | }} |
Latest revision as of 01:36, 18 September 2015
Short description: | p12@PEA15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PEA15_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_L37385_5end |
EntrezGene: | PEA15 |
HGNC: | 8822 |
UniProt: | Q14801 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.85e-08 | 32 |
smooth muscle cell | 4.76e-07 | 43 |
smooth muscle myoblast | 4.76e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
neural tube | 4.38e-13 | 56 |
neural rod | 4.38e-13 | 56 |
future spinal cord | 4.38e-13 | 56 |
neural keel | 4.38e-13 | 56 |
central nervous system | 4.28e-12 | 81 |
nervous system | 4.94e-11 | 89 |
regional part of nervous system | 2.86e-10 | 53 |
regional part of brain | 2.86e-10 | 53 |
regional part of forebrain | 9.52e-10 | 41 |
forebrain | 9.52e-10 | 41 |
anterior neural tube | 9.52e-10 | 41 |
future forebrain | 9.52e-10 | 41 |
neural plate | 4.22e-09 | 82 |
presumptive neural plate | 4.22e-09 | 82 |
ecto-epithelium | 5.32e-09 | 104 |
regional part of telencephalon | 1.61e-08 | 32 |
adult organism | 2.07e-08 | 114 |
neurectoderm | 2.46e-08 | 86 |
brain | 4.49e-08 | 68 |
future brain | 4.49e-08 | 68 |
brain grey matter | 8.32e-08 | 34 |
gray matter | 8.32e-08 | 34 |
telencephalon | 8.32e-08 | 34 |
tube | 2.36e-07 | 192 |
regional part of cerebral cortex | 2.42e-07 | 22 |
cerebral hemisphere | 3.21e-07 | 32 |