FFCP PHASE1:Hg19::chr3:39196096..39196107,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:39196096..39196107,- to FFCP PHASE1:Hg19::chr3:39196096..39196107,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64651 | |EntrezGene=64651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14300 | |HGNC=14300 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000514182,uc003cjh.2_5end | |||
|cluster_id=chr3:39196096..39196107,- | |||
|description=CAGE_peak_6_at_CSRNP1_5end | |||
|id=chr3:39196096..39196107,- | |||
|ontology_enrichment_celltype=CL:1000497!3.98e-08!18;CL:0002518!3.98e-08!18;CL:0002322!5.98e-08!5;CL:0000039!6.26e-08!7;CL:0000586!6.26e-08!7;CL:1000449!6.57e-08!16;CL:0000181!1.02e-07!12;CL:0000417!1.02e-07!12;CL:0000668!1.02e-07!12;CL:0000414!1.02e-07!12;CL:0000412!1.02e-07!12;CL:0000182!1.02e-07!12;CL:0000223!3.41e-07!59;CL:1000507!3.41e-07!12;CL:1000494!3.41e-07!12;CL:0000066!5.30e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.34e-16;12!CL:0000039;2.04e-10;7!CL:0000586;2.04e-10;7!CL:0002379;5.30e-09;1!CL:1000449;1.45e-08;15!CL:1000497;1.43e-07;17!CL:0002518;1.43e-07;17!CL:1000507;1.53e-07;10!CL:1000494;1.53e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.88e-16,12;CL:0000039,1.58e-10,7;CL:0000586,1.58e-10,7;CL:0002379,7.27e-09,1;CL:1000449,1.57e-08,15;CL:1000497,1.54e-07,17;CL:0002518,1.54e-07,17;CL:1000507,1.68e-07,10;CL:1000494,1.68e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.99e-17;11!UBERON:0009497;1.40e-14;13!UBERON:0009117;1.84e-12;10!UBERON:0005564;1.84e-12;10!UBERON:0003124;1.88e-09;1!UBERON:0003104;1.85e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;5.30e-09;1!DOID:10165;5.30e-09;1!DOID:3620;5.30e-09;1!DOID:3565;5.30e-09;1!DOID:1798;5.30e-09;1!DOID:3095;1.21e-08;22!DOID:2994;1.21e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.60e-09,1;DOID:10165,2.60e-09,1;DOID:1798,2.60e-09,1;DOID:3620,7.27e-09,1;DOID:3565,7.27e-09,1;DOID:3095,1.28e-08,22;DOID:2994,1.28e-08,22;DOID:305,6.17e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000466!1.28e-11!126;UBERON:0005172!6.48e-11!55;UBERON:0005173!6.48e-11!55;UBERON:0009569!2.33e-09!113;UBERON:0002417!3.92e-09!61;UBERON:0000916!3.92e-09!61;UBERON:0005177!4.71e-09!107;UBERON:0007499!5.19e-09!25;UBERON:0009856!1.62e-08!26;UBERON:0000058!4.92e-08!26;UBERON:0004211!6.57e-08!16;UBERON:0001285!6.57e-08!16;UBERON:0007684!6.57e-08!16;UBERON:0003220!6.57e-08!16;UBERON:0004208!6.57e-08!16;UBERON:0008835!7.48e-08!22;UBERON:0003894!7.48e-08!22;UBERON:0009497!7.53e-08!25;UBERON:0000015!7.53e-08!25;UBERON:0002423!7.53e-08!25;UBERON:0006235!7.53e-08!25;UBERON:0004161!7.53e-08!25;UBERON:0002113!8.77e-08!27;UBERON:0003918!8.77e-08!27;UBERON:0005095!8.77e-08!27;UBERON:0007687!8.77e-08!27;UBERON:0009854!2.25e-07!23;UBERON:0006555!2.67e-07!17;UBERON:0005103!2.67e-07!17;UBERON:0000083!2.67e-07!17;UBERON:0009201!2.67e-07!17;UBERON:0004819!2.67e-07!17;UBERON:0006553!2.67e-07!17;UBERON:0003074!2.67e-07!17;UBERON:0003060!2.67e-07!17;UBERON:0009773!3.41e-07!12;UBERON:0001231!3.41e-07!12;UBERON:0004810!3.41e-07!12;UBERON:0003929!3.73e-07!54;UBERON:0005911!7.06e-07!82;UBERON:0000080!9.25e-07!18;UBERON:0002120!9.25e-07!18;UBERON:0004875!9.25e-07!18;UBERON:0005721!9.25e-07!18;UBERON:0005754!9.25e-07!18;UBERON:0007297!9.25e-07!18;UBERON:0002107!9.40e-07!19;UBERON:0006925!9.40e-07!19;UBERON:0008836!9.40e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.01e-14;19!UBERON:0006925;5.01e-14;19!UBERON:0002423;1.51e-10;25!UBERON:0005172;1.43e-09;52!UBERON:0005173;1.43e-09;52!UBERON:0000473;3.55e-09;8!UBERON:0006555;1.45e-08;15!UBERON:0004819;1.45e-08;15!UBERON:0001285;1.45e-08;15!UBERON:0007684;1.45e-08;15!UBERON:0002417;1.84e-08;58!UBERON:0000916;1.84e-08;58!UBERON:0002365;3.29e-08;31!UBERON:0002330;3.29e-08;31!UBERON:0004211;1.53e-07;10!UBERON:0009773;1.53e-07;10!UBERON:0001231;1.53e-07;10!UBERON:0004810;1.53e-07;10!UBERON:0000949;4.14e-07;43!UBERON:0002368;8.19e-07;33!UBERON:0003135;8.46e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.08e-14,19;UBERON:0006925,4.08e-14,19;UBERON:0008836,4.08e-14,19;UBERON:0005172,1.12e-12,54;UBERON:0005173,1.12e-12,54;UBERON:0008835,3.97e-12,22;UBERON:0003894,3.97e-12,22;UBERON:0009854,1.40e-11,23;UBERON:0002417,3.00e-11,60;UBERON:0000916,3.00e-11,60;UBERON:0007499,1.29e-10,25;UBERON:0009497,1.29e-10,25;UBERON:0000015,1.29e-10,25;UBERON:0002423,1.29e-10,25;UBERON:0006235,1.29e-10,25;UBERON:0004161,1.29e-10,25;UBERON:0009856,3.46e-10,26;UBERON:0000473,2.84e-09,8;UBERON:0005177,7.22e-09,101;UBERON:0004211,1.57e-08,15;UBERON:0009773,1.57e-08,15;UBERON:0001231,1.57e-08,15;UBERON:0001285,1.57e-08,15;UBERON:0007684,1.57e-08,15;UBERON:0004208,1.57e-08,15;UBERON:0002365,1.83e-08,31;UBERON:0002330,1.83e-08,31;UBERON:0006555,5.29e-08,16;UBERON:0004819,5.29e-08,16;UBERON:0000949,1.25e-07,45;UBERON:0004810,1.68e-07,10;UBERON:0002368,1.94e-07,35;UBERON:0003135,7.21e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,3.48900583986214,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.45071417671979,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.57978255948989,0,0,0.853815942907168,0.927708378250397,0.813357600086629,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0,0,0.462629081407967,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0,0,1.15523005656622,2.35304930753057,1.46139224653261,0.422206515571503,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.974853958525138,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67043704337145,0,0,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.227884111694002,0.23056390438806,0.448788222048861,0,0.957003479195758,0.0915975934018623,4.26427820814908,0,0,0,0.225595660617181,0.19606253431774,0.839107934879214,0.75901493089674,0,0,0.652931232636591,0.706765357169704,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801588202515337,0,0,0,0.114536596165916,0.343189995723929,0.288109595976299,0.869767748958028,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,1.16495949527454,1.49688046383725,1.31865373409866,1.48287796479207,0.393709926058995,0,0,0,0.643012593860077,0.137539436597234,0,0,0,0,0,0.394028536495991,0.209818352539992,0.316801009558219,0.537862017998534,0,0,0,0,0,0,0,0,0,0.340776043570843,0,1.61207457045891,0,0,0,0.855434189421647,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,1.17632909849086,0,0,0.597019211547496,0,0,0.189403005275089,0,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,1.83334686136996,0.163771917510097,0.295712172434091,0.0675375846183947,0,0.413373593002368,0,0,0,0,0,0,0,0,0,0,3.63679717666819,0,0,0,0,0,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,1.27865567904938,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,1.5849330247695,0,0,1.1598144313382,0,0,0,0,0,0,0,0.694567422971502,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,1.00933139868063,0.327796715891087,3.04076402427449,1.22386595690378,1.3360870263278,1.8378979906969,0.250707539292375,0.151557396436479,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0.286888821570705,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p6@CSRNP1 | |||
}} | }} |
Latest revision as of 03:45, 18 September 2015
Short description: | p6@CSRNP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CSRNP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000514182, uc003cjh.2_5end |
EntrezGene: | CSRNP1 |
HGNC: | 14300 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.88e-16 | 12 |
germ line cell | 1.58e-10 | 7 |
germ cell | 1.58e-10 | 7 |
meningothelial cell | 7.27e-09 | 1 |
epithelial cell of nephron | 1.57e-08 | 15 |
kidney cell | 1.54e-07 | 17 |
kidney epithelial cell | 1.54e-07 | 17 |
kidney tubule cell | 1.68e-07 | 10 |
nephron tubule epithelial cell | 1.68e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
liver | 4.08e-14 | 19 |
digestive gland | 4.08e-14 | 19 |
liver bud | 4.08e-14 | 19 |
abdomen element | 1.12e-12 | 54 |
abdominal segment element | 1.12e-12 | 54 |
hepatic diverticulum | 3.97e-12 | 22 |
liver primordium | 3.97e-12 | 22 |
digestive tract diverticulum | 1.40e-11 | 23 |
abdominal segment of trunk | 3.00e-11 | 60 |
abdomen | 3.00e-11 | 60 |
epithelial sac | 1.29e-10 | 25 |
epithelium of foregut-midgut junction | 1.29e-10 | 25 |
anatomical boundary | 1.29e-10 | 25 |
hepatobiliary system | 1.29e-10 | 25 |
foregut-midgut junction | 1.29e-10 | 25 |
septum transversum | 1.29e-10 | 25 |
sac | 3.46e-10 | 26 |
testis | 2.84e-09 | 8 |
trunk region element | 7.22e-09 | 101 |
nephron epithelium | 1.57e-08 | 15 |
renal tubule | 1.57e-08 | 15 |
nephron tubule | 1.57e-08 | 15 |
nephron | 1.57e-08 | 15 |
uriniferous tubule | 1.57e-08 | 15 |
nephrogenic mesenchyme | 1.57e-08 | 15 |
exocrine gland | 1.83e-08 | 31 |
exocrine system | 1.83e-08 | 31 |
excretory tube | 5.29e-08 | 16 |
kidney epithelium | 5.29e-08 | 16 |
endocrine system | 1.25e-07 | 45 |
nephron tubule epithelium | 1.68e-07 | 10 |
endocrine gland | 1.94e-07 | 35 |
male reproductive organ | 7.21e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.60e-09 | 1 |
endocrine pancreas cancer | 2.60e-09 | 1 |
pancreatic endocrine carcinoma | 2.60e-09 | 1 |
central nervous system cancer | 7.27e-09 | 1 |
meningioma | 7.27e-09 | 1 |
germ cell and embryonal cancer | 1.28e-08 | 22 |
germ cell cancer | 1.28e-08 | 22 |
carcinoma | 6.17e-07 | 106 |