FFCP PHASE1:Hg19::chr6:35744367..35744380,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389383 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21250 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000481904_5end | |||
|cluster_id=chr6:35744367..35744380,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_1_at_C6orf126_5end | |||
|id=chr6:35744367..35744380,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.65e-14!5;CL:0002319!1.96e-10!25;CL:0000133!8.79e-08!59;CL:0000242!6.65e-07!2;CL:0000221!9.24e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.07e-17;2!CL:0000242;1.07e-17;2!CL:0000306;1.22e-09;4!CL:0002222;1.22e-09;4!CL:0002224;1.22e-09;4!CL:0000312;7.01e-08;5!CL:0000240;8.97e-07;6!CL:0000311;8.97e-07;6!CL:0000079;8.97e-07;6!CL:0000237;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.07e-17,2;CL:0000306,1.22e-09,4;CL:0002222,1.22e-09,4;CL:0002224,1.22e-09,4;CL:0000312,7.01e-08,5;CL:0000240,8.97e-07,6;CL:0000311,8.97e-07,6;CL:0000079,8.97e-07,6;CL:0000237,8.97e-07,6;CL:0000036,8.97e-07,6;CL:0000357,8.97e-07,6;CL:0000114,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.48e-18;2!CL:0000357;8.97e-07;6!CL:0000114;8.97e-07;6 | |||
|ontology_enrichment_disease=DOID:305!8.67e-08!106;DOID:0050687!1.03e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.57e-09;4!DOID:1612;1.57e-09;4!DOID:4362;7.01e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.44e-09,4;DOID:1612,1.44e-09,4;DOID:4362,7.49e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003135!6.43e-09!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.25e-45;3!UBERON:0004054;6.25e-45;3!UBERON:0001301;1.84e-34;1!UBERON:0001000;3.61e-34;1!UBERON:0005352;3.61e-34;1!UBERON:0005904;5.06e-34;4!UBERON:0004175;6.23e-15;21!UBERON:0000058;2.66e-14;10!UBERON:0003135;4.25e-13;11!UBERON:0010077;1.22e-09;4!UBERON:0005389;1.22e-09;4!UBERON:0000484;1.22e-09;4!UBERON:0000965;1.22e-09;4!UBERON:0001803;1.22e-09;4!UBERON:0003101;4.94e-07;22!UBERON:0000079;4.94e-07;22!UBERON:0000002;8.97e-07;6!UBERON:0001560;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.25e-45,3;UBERON:0004054,6.25e-45,3;UBERON:0001301,1.84e-34,1;UBERON:0001000,3.61e-34,1;UBERON:0005352,3.61e-34,1;UBERON:0005904,5.06e-34,4;UBERON:0003135,4.25e-13,11;UBERON:0004175,1.18e-12,25;UBERON:0010077,1.22e-09,4;UBERON:0005389,1.22e-09,4;UBERON:0000484,1.22e-09,4;UBERON:0002546,1.22e-09,4;UBERON:0000965,1.22e-09,4;UBERON:0001803,1.22e-09,4;UBERON:0003073,1.22e-09,4;UBERON:0005426,1.22e-09,4;UBERON:0000058,5.35e-08,19;UBERON:0003101,4.94e-07,22;UBERON:0000079,4.94e-07,22;UBERON:0003133,6.25e-07,48;UBERON:0000002,9.49e-07,6;UBERON:0001560,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.530119073285941,0.348581828608555,0.207322110030741,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36750641709634,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,52.418000472609,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0.961905843018405,0,0,0,0,0.514784993585894,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.964518890790115,0.825236619583403,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,3.59190574687462,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,1.40500471742064,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0.392590874004102,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0.31020638566432,0,0.223710863595585,0,0,0,0,0,0,1.16969731731053,0.994753875806841,0,0,0.329821550236287,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0,0.250707539292375,0.303114792872958,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@C6orf126 | |||
}} |
Latest revision as of 11:27, 18 September 2015
Short description: | p1@C6orf126 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C6orf126_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 0bp_to_ENST00000481904_5end |
EntrezGene: | C6orf126 |
HGNC: | 21250 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.07e-17 | 2 |
crystallin accumulating cell | 1.22e-09 | 4 |
vertebrate lens cell | 1.22e-09 | 4 |
lens epithelial cell | 1.22e-09 | 4 |
keratinocyte | 7.01e-08 | 5 |
stratified squamous epithelial cell | 8.97e-07 | 6 |
keratin accumulating cell | 8.97e-07 | 6 |
stratified epithelial cell | 8.97e-07 | 6 |
keratinizing barrier epithelial cell | 8.97e-07 | 6 |
epithelial fate stem cell | 8.97e-07 | 6 |
stratified epithelial stem cell | 8.97e-07 | 6 |
surface ectodermal cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.25e-45 | 3 |
internal male genitalia | 6.25e-45 | 3 |
epididymis | 1.84e-34 | 1 |
vas deferens | 3.61e-34 | 1 |
spermatic cord | 3.61e-34 | 1 |
duct of male reproductive system | 5.06e-34 | 4 |
male reproductive organ | 4.25e-13 | 11 |
internal genitalia | 1.18e-12 | 25 |
cuboidal epithelium | 1.22e-09 | 4 |
transparent eye structure | 1.22e-09 | 4 |
simple cuboidal epithelium | 1.22e-09 | 4 |
cranial placode | 1.22e-09 | 4 |
lens of camera-type eye | 1.22e-09 | 4 |
epithelium of lens | 1.22e-09 | 4 |
lens placode | 1.22e-09 | 4 |
lens vesicle | 1.22e-09 | 4 |
duct | 5.35e-08 | 19 |
male organism | 4.94e-07 | 22 |
male reproductive system | 4.94e-07 | 22 |
reproductive organ | 6.25e-07 | 48 |
uterine cervix | 9.49e-07 | 6 |
neck of organ | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.44e-09 | 4 |
breast cancer | 1.44e-09 | 4 |
cervical cancer | 7.49e-08 | 5 |