FFCP PHASE1:Hg19::chr1:170632414..170632421,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:170632414..170632421,+ to FFCP PHASE1:Hg19::chr1:170632414..170632421,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=139bp_to_ENST00000367760_5end | |||
|cluster_id=chr1:170632414..170632421,+ | |||
|coexpression_cluster_id=C929 | |||
|description=CAGE_peak_28_at_PRRX1_5end | |||
|id=chr1:170632414..170632421,+ | |||
|ontology_enrichment_celltype=CL:0000057!9.26e-24!75;CL:0000055!1.11e-22!180;CL:0002620!9.60e-11!23;CL:0002334!1.06e-10!12;CL:0002570!5.51e-08!8;CL:0000048!6.10e-08!430;CL:0002556!1.15e-07!6;CL:0000723!1.86e-07!436;CL:0002552!5.19e-07!5;CL:0000034!7.68e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.79e-11;12!CL:0002552;3.39e-10;5!CL:0000062;4.78e-10;9!CL:0000135;2.40e-08;3!CL:0000388;2.40e-08;3!CL:0002580;4.54e-08;3!CL:0000057;1.69e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.55e-15,76;CL:0002334,4.89e-11,12;CL:0002552,2.32e-10,5;CL:0000135,2.04e-08,3;CL:0000388,2.04e-08,3;CL:0002580,2.84e-08,3;CL:0000062,3.99e-08,11;CL:0000375,3.99e-08,11;CL:0000335,3.99e-08,11;CL:0000228,9.79e-07,1;CL:0002372,9.79e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000335;3.10e-08;11!UBERON:0010115;4.29e-07;1!UBERON:0003099;4.29e-07;1!UBERON:0003852;4.29e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;4.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,5.26e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.36e-11!95;UBERON:0002199!5.95e-09!45;UBERON:0002416!5.95e-09!45;UBERON:0000914!4.64e-08!83;UBERON:0002329!4.64e-08!83;UBERON:0003077!4.64e-08!83;UBERON:0003059!4.64e-08!83;UBERON:0007282!4.64e-08!83;UBERON:0009618!4.64e-08!83;UBERON:0007285!4.64e-08!83;UBERON:0002097!9.70e-08!40;UBERON:0001758!1.15e-07!6;UBERON:0003672!1.15e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.40e-08;3!UBERON:0000043;2.40e-08;3!UBERON:0007845;2.40e-08;3!UBERON:0002363;4.29e-07;1!UBERON:0007029;4.29e-07;1!UBERON:0005705;4.29e-07;1!UBERON:0008193;4.29e-07;1!UBERON:0010912;4.29e-07;1!UBERON:0002514;4.29e-07;1!UBERON:0003457;4.29e-07;1!UBERON:0008907;4.29e-07;1!UBERON:0008001;4.29e-07;1!UBERON:0007213;4.29e-07;1!UBERON:0009891;4.29e-07;1!UBERON:0007914;4.29e-07;1!UBERON:0007375;4.29e-07;1!UBERON:0003323;4.29e-07;1!UBERON:0010258;4.29e-07;1!UBERON:0005253;4.29e-07;1!UBERON:0007842;4.29e-07;1!UBERON:0002397;4.29e-07;1!UBERON:0003113;4.29e-07;1!UBERON:0003277;4.29e-07;1!UBERON:0001709;4.29e-07;1!UBERON:0002244;4.29e-07;1!UBERON:0005620;4.29e-07;1!UBERON:0010364;4.29e-07;1!UBERON:0004288;4.29e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.04e-08,3;UBERON:0000043,2.04e-08,3;UBERON:0007845,2.04e-08,3;UBERON:0003102,8.18e-08,99;UBERON:0007029,3.52e-07,1;UBERON:0005705,4.69e-07,1;UBERON:0008193,4.69e-07,1;UBERON:0010912,4.69e-07,1;UBERON:0002514,4.69e-07,1;UBERON:0003457,4.69e-07,1;UBERON:0008907,4.69e-07,1;UBERON:0008001,4.69e-07,1;UBERON:0007213,4.69e-07,1;UBERON:0009891,4.69e-07,1;UBERON:0007914,4.69e-07,1;UBERON:0009292,4.69e-07,1;UBERON:0003099,4.69e-07,1;UBERON:0007375,4.69e-07,1;UBERON:0003323,4.69e-07,1;UBERON:0010258,4.69e-07,1;UBERON:0007842,4.69e-07,1;UBERON:0009494,4.69e-07,1;UBERON:0010042,4.69e-07,1;UBERON:0010045,4.69e-07,1;UBERON:0010259,4.69e-07,1;UBERON:0010359,4.69e-07,1;UBERON:0009526,4.69e-07,1;UBERON:0002397,4.69e-07,1;UBERON:0003113,4.69e-07,1;UBERON:0003277,4.69e-07,1;UBERON:0001709,4.69e-07,1;UBERON:0004066,4.69e-07,1;UBERON:0002244,4.69e-07,1;UBERON:0005620,4.69e-07,1;UBERON:0004362,4.69e-07,1;UBERON:0010364,4.69e-07,1;UBERON:0010046,4.69e-07,1;UBERON:0005868,4.69e-07,1;UBERON:0007238,4.69e-07,1;UBERON:0004288,4.69e-07,1;UBERON:0004068,4.69e-07,1;UBERON:0010334,4.69e-07,1;UBERON:0003852,4.69e-07,1;UBERON:0010253,4.69e-07,1;UBERON:0002363,4.97e-07,1;UBERON:0007645,4.97e-07,1;UBERON:0007647,4.97e-07,1;UBERON:0010115,4.97e-07,1 | |||
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| ||
|short_description=p28@PRRX1 | |||
}} | }} |
Latest revision as of 14:10, 18 September 2015
Short description: | p28@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_PRRX1_5end |
Coexpression cluster: | C929_myxofibrosarcoma_Fibroblast_normal_Olfactory_mesenchymal_dura_Preadipocyte |
Association with transcript: | 139bp_to_ENST00000367760_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.55e-15 | 76 |
preadipocyte | 4.89e-11 | 12 |
fibroblast of gingiva | 2.32e-10 | 5 |
fibrocyte | 2.04e-08 | 3 |
tendon cell | 2.04e-08 | 3 |
preadipocyte of the breast | 2.84e-08 | 3 |
osteoblast | 3.99e-08 | 11 |
osteoprogenitor cell | 3.99e-08 | 11 |
mesenchyme condensation cell | 3.99e-08 | 11 |
multinucleate cell | 9.79e-07 | 1 |
myotube | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 5.26e-07 | 1 |