FFCP PHASE1:Hg19::chr14:103988009..103988065,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1152 | |EntrezGene=1152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1991 | |HGNC=1991 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001yne.1_5end | |association_with_transcript=0bp_to_uc001yne.1_5end | ||
|cluster_id=chr14:103988009..103988065,- | |||
|description=CAGE_peak_7_at_CKB_5end | |description=CAGE_peak_7_at_CKB_5end | ||
|id=chr14:103988009..103988065,- | |id=chr14:103988009..103988065,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.93e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.35e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.05e-18!115;UBERON:0001049!2.53e-09!57;UBERON:0005068!2.53e-09!57;UBERON:0006241!2.53e-09!57;UBERON:0007135!2.53e-09!57;UBERON:0003080!3.15e-09!42;UBERON:0001893!4.32e-09!34;UBERON:0001869!4.89e-09!32;UBERON:0002780!5.66e-09!41;UBERON:0001890!5.66e-09!41;UBERON:0006240!5.66e-09!41;UBERON:0002791!1.07e-08!33;UBERON:0002020!3.40e-08!34;UBERON:0003528!3.40e-08!34;UBERON:0004921!5.99e-08!129;UBERON:0004185!5.99e-08!129;UBERON:0002616!1.34e-07!59;UBERON:0004119!1.40e-07!169;UBERON:0000925!1.40e-07!169;UBERON:0006595!1.40e-07!169;UBERON:0002619!1.67e-07!22;UBERON:0000064!2.03e-07!219;UBERON:0000077!2.21e-07!130;UBERON:0001007!2.27e-07!155;UBERON:0001555!2.27e-07!155;UBERON:0007026!2.27e-07!155;UBERON:0001950!6.21e-07!20;UBERON:0001041!9.03e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.95e-11;32!UBERON:0002619;5.22e-11;22!UBERON:0002791;4.65e-10;32!UBERON:0001950;5.82e-10;20!UBERON:0001893;1.64e-09;34!UBERON:0000956;5.45e-09;25!UBERON:0000203;5.45e-09;25!UBERON:0003528;6.42e-09;34!UBERON:0002020;6.42e-09;34!UBERON:0002780;5.80e-08;41!UBERON:0001890;5.80e-08;41!UBERON:0001737;6.26e-07;9!UBERON:0001557;6.26e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.78e-15,114;UBERON:0001869,5.74e-12,32;UBERON:0002619,5.08e-11,22;UBERON:0001893,8.63e-11,34;UBERON:0002791,8.86e-11,32;UBERON:0001950,3.76e-10,20;UBERON:0002780,4.35e-10,41;UBERON:0001890,4.35e-10,41;UBERON:0003080,4.35e-10,41;UBERON:0006240,4.35e-10,41;UBERON:0011216,5.30e-10,223;UBERON:0003528,1.06e-09,34;UBERON:0002020,1.06e-09,34;UBERON:0000956,5.29e-09,25;UBERON:0000203,5.29e-09,25;UBERON:0000073,6.79e-09,53;UBERON:0002616,6.79e-09,53;UBERON:0001049,6.36e-08,56;UBERON:0005068,6.36e-08,56;UBERON:0006241,6.36e-08,56;UBERON:0007135,6.36e-08,56;UBERON:0001737,2.03e-07,9;UBERON:0000955,9.43e-07,68;UBERON:0006238,9.43e-07,68 | |||
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| ||
|short_description=p7@CKB | |short_description=p7@CKB | ||
}} | }} |
Latest revision as of 15:39, 18 September 2015
Short description: | p7@CKB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CKB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001yne.1_5end |
EntrezGene: | CKB |
HGNC: | 1991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.78e-15 | 114 |
cerebral hemisphere | 5.74e-12 | 32 |
regional part of cerebral cortex | 5.08e-11 | 22 |
telencephalon | 8.63e-11 | 34 |
regional part of telencephalon | 8.86e-11 | 32 |
neocortex | 3.76e-10 | 20 |
regional part of forebrain | 4.35e-10 | 41 |
forebrain | 4.35e-10 | 41 |
anterior neural tube | 4.35e-10 | 41 |
future forebrain | 4.35e-10 | 41 |
organ system subdivision | 5.30e-10 | 223 |
brain grey matter | 1.06e-09 | 34 |
gray matter | 1.06e-09 | 34 |
cerebral cortex | 5.29e-09 | 25 |
pallium | 5.29e-09 | 25 |
regional part of nervous system | 6.79e-09 | 53 |
regional part of brain | 6.79e-09 | 53 |
neural tube | 6.36e-08 | 56 |
neural rod | 6.36e-08 | 56 |
future spinal cord | 6.36e-08 | 56 |
neural keel | 6.36e-08 | 56 |
larynx | 2.03e-07 | 9 |
brain | 9.43e-07 | 68 |
future brain | 9.43e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.35e-07 | 106 |