FFCP PHASE1:Hg19::chr7:45039338..45039360,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83605 | |EntrezGene=83605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21708 | |HGNC=21708 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_030770_5end | |association_with_transcript=0bp_to_NR_030770_5end | ||
|cluster_id=chr7:45039338..45039360,+ | |||
|description=CAGE_peak_4_at_CCM2_5end | |description=CAGE_peak_4_at_CCM2_5end | ||
|id=chr7:45039338..45039360,+ | |id=chr7:45039338..45039360,+ | ||
|ontology_enrichment_celltype=CL:0000115!1.04e-08!35;CL:0002078!5.40e-07!44 | |ontology_enrichment_celltype=CL:0000115!1.04e-08!35;CL:0002078!5.40e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000115;9.96e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.27e-09,36;CL:0002078,1.00e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.72e-12!82;UBERON:0001049!3.50e-12!57;UBERON:0005068!3.50e-12!57;UBERON:0006241!3.50e-12!57;UBERON:0007135!3.50e-12!57;UBERON:0005743!6.42e-12!86;UBERON:0000073!4.43e-11!94;UBERON:0001016!4.43e-11!94;UBERON:0000955!1.26e-10!69;UBERON:0006238!1.26e-10!69;UBERON:0002780!3.54e-10!41;UBERON:0001890!3.54e-10!41;UBERON:0006240!3.54e-10!41;UBERON:0002616!1.14e-09!59;UBERON:0003080!2.41e-09!42;UBERON:0003075!3.08e-09!86;UBERON:0007284!3.08e-09!86;UBERON:0001893!5.27e-09!34;UBERON:0002020!8.54e-09!34;UBERON:0003528!8.54e-09!34;UBERON:0002791!1.13e-08!33;UBERON:0002346!2.20e-08!90;UBERON:0001869!3.85e-08!32;UBERON:0003056!1.13e-07!61;UBERON:0000025!1.89e-07!194 | |ontology_enrichment_uberon=UBERON:0001017!1.72e-12!82;UBERON:0001049!3.50e-12!57;UBERON:0005068!3.50e-12!57;UBERON:0006241!3.50e-12!57;UBERON:0007135!3.50e-12!57;UBERON:0005743!6.42e-12!86;UBERON:0000073!4.43e-11!94;UBERON:0001016!4.43e-11!94;UBERON:0000955!1.26e-10!69;UBERON:0006238!1.26e-10!69;UBERON:0002780!3.54e-10!41;UBERON:0001890!3.54e-10!41;UBERON:0006240!3.54e-10!41;UBERON:0002616!1.14e-09!59;UBERON:0003080!2.41e-09!42;UBERON:0003075!3.08e-09!86;UBERON:0007284!3.08e-09!86;UBERON:0001893!5.27e-09!34;UBERON:0002020!8.54e-09!34;UBERON:0003528!8.54e-09!34;UBERON:0002791!1.13e-08!33;UBERON:0002346!2.20e-08!90;UBERON:0001869!3.85e-08!32;UBERON:0003056!1.13e-07!61;UBERON:0000025!1.89e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.57e-08;34!UBERON:0003528;4.16e-08;34!UBERON:0002020;4.16e-08;34!UBERON:0002780;5.93e-08;41!UBERON:0001890;5.93e-08;41!UBERON:0001869;1.03e-07;32!UBERON:0002791;1.06e-07;32!UBERON:0000073;2.70e-07;53!UBERON:0002616;2.70e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.43e-14,56;UBERON:0005068,3.43e-14,56;UBERON:0006241,3.43e-14,56;UBERON:0007135,3.43e-14,56;UBERON:0001017,4.92e-14,81;UBERON:0001016,4.15e-13,89;UBERON:0000073,7.23e-13,53;UBERON:0002616,7.23e-13,53;UBERON:0003075,8.81e-13,82;UBERON:0007284,8.81e-13,82;UBERON:0000955,4.02e-12,68;UBERON:0006238,4.02e-12,68;UBERON:0002346,2.51e-11,86;UBERON:0002780,4.98e-11,41;UBERON:0001890,4.98e-11,41;UBERON:0003080,4.98e-11,41;UBERON:0006240,4.98e-11,41;UBERON:0001893,5.41e-10,34;UBERON:0003528,9.31e-10,34;UBERON:0002020,9.31e-10,34;UBERON:0003056,1.45e-09,61;UBERON:0002791,4.54e-09,32;UBERON:0001869,5.00e-09,32;UBERON:0010371,7.24e-09,104;UBERON:0010314,9.11e-09,132;UBERON:0000025,2.14e-07,192 | |||
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| ||
|short_description=p4@CCM2 | |short_description=p4@CCM2 | ||
}} | }} |
Latest revision as of 18:33, 18 September 2015
Short description: | p4@CCM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_030770_5end |
EntrezGene: | CCM2 |
HGNC: | 21708 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.27e-09 | 36 |
meso-epithelial cell | 1.00e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.43e-14 | 56 |
neural rod | 3.43e-14 | 56 |
future spinal cord | 3.43e-14 | 56 |
neural keel | 3.43e-14 | 56 |
central nervous system | 4.92e-14 | 81 |
nervous system | 4.15e-13 | 89 |
regional part of nervous system | 7.23e-13 | 53 |
regional part of brain | 7.23e-13 | 53 |
neural plate | 8.81e-13 | 82 |
presumptive neural plate | 8.81e-13 | 82 |
brain | 4.02e-12 | 68 |
future brain | 4.02e-12 | 68 |
neurectoderm | 2.51e-11 | 86 |
regional part of forebrain | 4.98e-11 | 41 |
forebrain | 4.98e-11 | 41 |
anterior neural tube | 4.98e-11 | 41 |
future forebrain | 4.98e-11 | 41 |
telencephalon | 5.41e-10 | 34 |
brain grey matter | 9.31e-10 | 34 |
gray matter | 9.31e-10 | 34 |
pre-chordal neural plate | 1.45e-09 | 61 |
regional part of telencephalon | 4.54e-09 | 32 |
cerebral hemisphere | 5.00e-09 | 32 |
ecto-epithelium | 7.24e-09 | 104 |
structure with developmental contribution from neural crest | 9.11e-09 | 132 |
tube | 2.14e-07 | 192 |