FFCP PHASE1:Hg19::chr17:1549011..1549032,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8578 | |EntrezGene=8578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16820 | |HGNC=16820 | ||
|TSSclassifier=strong | |||
|UniProt=Q14162 | |UniProt=Q14162 | ||
|association_with_transcript=8bp_to_ENST00000348987,ENST00000434376,NM_003693,NM_145350,NM_145352,NR_028075,NR_028076,uc002fsy.1,uc002fsz.1,uc002fta.1,uc010cjv.1_5end | |association_with_transcript=8bp_to_ENST00000348987,ENST00000434376,NM_003693,NM_145350,NM_145352,NR_028075,NR_028076,uc002fsy.1,uc002fsz.1,uc002fta.1,uc010cjv.1_5end | ||
|cluster_id=chr17:1549011..1549032,- | |||
|coexpression_cluster_id=C1611 | |coexpression_cluster_id=C1611 | ||
|description=CAGE_peak_1_at_SCARF1_5end | |description=CAGE_peak_1_at_SCARF1_5end | ||
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|ontology_enrichment_celltype=CL:0000766!1.36e-27!76;CL:0000763!7.42e-27!112;CL:0000049!7.42e-27!112;CL:0000557!3.05e-25!71;CL:0002057!6.78e-24!42;CL:0000839!1.39e-22!70;CL:0002009!2.71e-22!65;CL:0000115!1.33e-21!35;CL:0000860!5.29e-21!45;CL:0002194!5.88e-21!63;CL:0000576!5.88e-21!63;CL:0000040!5.88e-21!63;CL:0000559!5.88e-21!63;CL:0002139!1.88e-19!24;CL:0002078!9.98e-16!44;CL:0000071!3.94e-15!18;CL:0002546!3.94e-15!18;CL:0000037!6.46e-14!172;CL:0000566!6.46e-14!172;CL:0000988!1.50e-13!182;CL:0002032!7.65e-13!165;CL:0000837!7.65e-13!165;CL:0000738!2.11e-11!140;CL:0002031!6.15e-09!124;CL:1000413!1.36e-08!9;CL:0000213!1.69e-08!57;CL:0000215!1.69e-08!57;CL:0002087!2.40e-07!119 | |ontology_enrichment_celltype=CL:0000766!1.36e-27!76;CL:0000763!7.42e-27!112;CL:0000049!7.42e-27!112;CL:0000557!3.05e-25!71;CL:0002057!6.78e-24!42;CL:0000839!1.39e-22!70;CL:0002009!2.71e-22!65;CL:0000115!1.33e-21!35;CL:0000860!5.29e-21!45;CL:0002194!5.88e-21!63;CL:0000576!5.88e-21!63;CL:0000040!5.88e-21!63;CL:0000559!5.88e-21!63;CL:0002139!1.88e-19!24;CL:0002078!9.98e-16!44;CL:0000071!3.94e-15!18;CL:0002546!3.94e-15!18;CL:0000037!6.46e-14!172;CL:0000566!6.46e-14!172;CL:0000988!1.50e-13!182;CL:0002032!7.65e-13!165;CL:0000837!7.65e-13!165;CL:0000738!2.11e-11!140;CL:0002031!6.15e-09!124;CL:1000413!1.36e-08!9;CL:0000213!1.69e-08!57;CL:0000215!1.69e-08!57;CL:0002087!2.40e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.07e-24;33!CL:0002057;1.07e-24;33!CL:0002139;3.09e-22;24!CL:0000115;4.35e-22;36!CL:0000473;7.80e-22;39!CL:0000234;7.80e-22;39!CL:0000071;3.04e-17;18!CL:0000576;1.27e-15;48!CL:0000766;1.66e-13;69!CL:0002078;2.40e-12;45!CL:0000763;2.47e-11;100!CL:1000413;1.08e-09;9!CL:0000213;3.29e-07;58!CL:0000215;3.29e-07;58!CL:0002544;6.77e-07;6 | |ontology_enrichment_celltype_v019=CL:0000860;1.07e-24;33!CL:0002057;1.07e-24;33!CL:0002139;3.09e-22;24!CL:0000115;4.35e-22;36!CL:0000473;7.80e-22;39!CL:0000234;7.80e-22;39!CL:0000071;3.04e-17;18!CL:0000576;1.27e-15;48!CL:0000766;1.66e-13;69!CL:0002078;2.40e-12;45!CL:0000763;2.47e-11;100!CL:1000413;1.08e-09;9!CL:0000213;3.29e-07;58!CL:0000215;3.29e-07;58!CL:0002544;6.77e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.84e-32,72;CL:0000763,8.91e-32,108;CL:0000049,8.91e-32,108;CL:0000557,2.60e-29,67;CL:0000473,4.10e-26,48;CL:0000234,4.10e-26,48;CL:0000115,5.34e-26,36;CL:0002009,7.07e-26,61;CL:0000839,1.59e-25,66;CL:0000860,7.51e-25,42;CL:0002057,7.51e-25,42;CL:0002194,2.64e-24,59;CL:0000576,2.64e-24,59;CL:0000040,2.64e-24,59;CL:0000559,2.64e-24,59;CL:0002139,3.04e-22,24;CL:0002078,6.10e-19,45;CL:0000071,3.03e-17,18;CL:0002546,3.03e-17,18;CL:0000037,1.50e-13,168;CL:0002032,4.85e-13,161;CL:0000837,4.85e-13,161;CL:0000988,1.42e-11,177;CL:0000213,8.18e-11,58;CL:0000215,8.18e-11,58;CL:0000738,2.07e-10,136;CL:1000413,1.09e-09,9;CL:0002031,6.01e-08,120;CL:0002544,6.80e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-18;42!CL:0002546;3.04e-17;18!CL:0000049;5.83e-09;108 | |ontology_enrichment_development_v019=CL:0002057;1.58e-18;42!CL:0002546;3.04e-17;18!CL:0000049;5.83e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-33!115;UBERON:0002193!2.43e-28!112;UBERON:0003081!2.75e-24!216;UBERON:0002390!3.96e-24!102;UBERON:0003061!3.96e-24!102;UBERON:0002405!4.87e-23!115;UBERON:0002371!1.30e-20!80;UBERON:0001474!1.99e-17!86;UBERON:0001986!3.94e-15!18;UBERON:0004638!3.94e-15!18;UBERON:0004852!3.94e-15!18;UBERON:0004765!5.09e-12!101;UBERON:0001434!5.09e-12!101;UBERON:0000487!1.47e-11!22;UBERON:0006914!3.90e-09!25;UBERON:0000025!4.02e-09!194;UBERON:0004111!1.26e-08!241;UBERON:0003915!1.36e-08!9;UBERON:0004700!1.36e-08!9;UBERON:0001917!1.36e-08!9;UBERON:0001049!6.62e-08!57;UBERON:0005068!6.62e-08!57;UBERON:0006241!6.62e-08!57;UBERON:0007135!6.62e-08!57;UBERON:0003080!6.16e-07!42;UBERON:0000467!8.43e-07!625 | |ontology_enrichment_uberon=UBERON:0007023!1.79e-33!115;UBERON:0002193!2.43e-28!112;UBERON:0003081!2.75e-24!216;UBERON:0002390!3.96e-24!102;UBERON:0003061!3.96e-24!102;UBERON:0002405!4.87e-23!115;UBERON:0002371!1.30e-20!80;UBERON:0001474!1.99e-17!86;UBERON:0001986!3.94e-15!18;UBERON:0004638!3.94e-15!18;UBERON:0004852!3.94e-15!18;UBERON:0004765!5.09e-12!101;UBERON:0001434!5.09e-12!101;UBERON:0000487!1.47e-11!22;UBERON:0006914!3.90e-09!25;UBERON:0000025!4.02e-09!194;UBERON:0004111!1.26e-08!241;UBERON:0003915!1.36e-08!9;UBERON:0004700!1.36e-08!9;UBERON:0001917!1.36e-08!9;UBERON:0001049!6.62e-08!57;UBERON:0005068!6.62e-08!57;UBERON:0006241!6.62e-08!57;UBERON:0007135!6.62e-08!57;UBERON:0003080!6.16e-07!42;UBERON:0000467!8.43e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.04e-17;18!UBERON:0001986;3.04e-17;18!UBERON:0004852;3.04e-17;18!UBERON:0000487;1.17e-12;22!UBERON:0006914;3.06e-10;25!UBERON:0003915;1.08e-09;9!UBERON:0004700;1.08e-09;9!UBERON:0001917;1.08e-09;9!UBERON:0007023;2.62e-09;114 | |ontology_enrichment_uberon_v019=UBERON:0004638;3.04e-17;18!UBERON:0001986;3.04e-17;18!UBERON:0004852;3.04e-17;18!UBERON:0000487;1.17e-12;22!UBERON:0006914;3.06e-10;25!UBERON:0003915;1.08e-09;9!UBERON:0004700;1.08e-09;9!UBERON:0001917;1.08e-09;9!UBERON:0007023;2.62e-09;114 | ||
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| ||
|short_description=p1@SCARF1 | |short_description=p1@SCARF1 | ||
}} | }} |
Latest revision as of 18:34, 18 September 2015
Short description: | p1@SCARF1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCARF1_5end |
Coexpression cluster: | C1611_Renal_Hepatic_Eosinophils_Endothelial_CD14_heart_Neutrophils |
Association with transcript: | 8bp_to_ENST00000348987, ENST00000434376, NM_003693, NM_145350, NM_145352, NR_028075, NR_028076, uc002fsy.1, uc002fsz.1, uc002fta.1, uc010cjv.1_5end |
EntrezGene: | SCARF1 |
HGNC: | 16820 |
UniProt: | Q14162 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data