FFCP PHASE1:Hg19::chr5:76114796..76114838,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:76114796..76114838,+ to FFCP PHASE1:Hg19::chr5:76114796..76114838,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2150 | |EntrezGene=2150 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3538 | |HGNC=3538 | ||
|TSSclassifier=strong | |||
|UniProt=P55085,Q53XJ8 | |UniProt=P55085,Q53XJ8 | ||
|association_with_transcript=0bp_to_ENST00000296677,NM_005242,uc003keo.2_5end | |||
|cluster_id=chr5:76114796..76114838,+ | |||
|description=CAGE_peak_3_at_F2RL1_5end | |||
|id=chr5:76114796..76114838,+ | |||
|ontology_enrichment_celltype=CL:0002321!2.72e-21!248;CL:0000220!7.93e-21!246;CL:0000066!4.55e-17!254;CL:0000222!3.76e-12!119;CL:0002139!4.08e-10!24;CL:0000192!5.19e-10!42;CL:0000514!5.19e-10!42;CL:0000393!7.66e-10!60;CL:0000211!7.66e-10!60;CL:0000183!6.55e-09!59;CL:0000187!8.39e-09!54;CL:0000359!1.33e-08!32;CL:0000071!3.21e-08!18;CL:0002546!3.21e-08!18;CL:0000115!4.49e-08!35;CL:0000223!6.35e-08!59;CL:0002076!9.45e-08!43;CL:0002078!1.15e-07!44;CL:0000680!2.23e-07!57;CL:0000056!2.23e-07!57;CL:0000355!2.23e-07!57;CL:1000497!8.78e-07!18;CL:0002518!8.78e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.65e-11;24!CL:0000071;2.97e-09;18!CL:0000359;3.03e-09;32!CL:0000115;2.38e-08;36!CL:0000192;3.89e-08;43!CL:1000497;8.24e-08;17!CL:0002518;8.24e-08;17!CL:1000507;1.90e-07;10!CL:1000494;1.90e-07;10!CL:1000449;5.93e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.97e-25,250;CL:0000066,1.15e-17,253;CL:0000222,1.23e-13,121;CL:0002139,5.64e-11,24;CL:0000192,7.00e-11,43;CL:0000514,7.00e-11,43;CL:0000393,2.96e-10,61;CL:0000211,2.96e-10,61;CL:0000115,1.66e-09,36;CL:0000359,1.71e-09,32;CL:0000187,2.20e-09,55;CL:0000071,6.85e-09,18;CL:0002546,6.85e-09,18;CL:0002078,9.44e-09,45;CL:0000223,1.09e-08,58;CL:0002076,1.51e-08,42;CL:0000680,4.75e-08,58;CL:0000056,4.75e-08,58;CL:0000355,4.75e-08,58;CL:1000497,8.60e-08,17;CL:0002518,8.60e-08,17;CL:1000507,1.97e-07,10;CL:1000494,1.97e-07,10;CL:1000449,6.31e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;2.97e-09;18!CL:0000514;3.89e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!6.95e-09!14;DOID:193!1.61e-08!29;DOID:120!6.69e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.45e-09;14!DOID:193;4.26e-08;29!DOID:120;2.25e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.27e-09,14;DOID:193,4.45e-08,29;DOID:120,2.06e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0003914!2.99e-24!118;UBERON:0004535!8.31e-21!110;UBERON:0001009!5.88e-20!113;UBERON:0000477!3.59e-19!286;UBERON:0002049!4.18e-19!79;UBERON:0007798!4.18e-19!79;UBERON:0004111!1.35e-18!241;UBERON:0000481!1.40e-17!347;UBERON:0000490!1.17e-16!138;UBERON:0000119!2.60e-16!312;UBERON:0000483!4.76e-16!309;UBERON:0000055!4.14e-15!69;UBERON:0000922!5.86e-15!612;UBERON:0004872!6.47e-15!84;UBERON:0000923!1.22e-13!604;UBERON:0005291!1.22e-13!604;UBERON:0006598!1.22e-13!604;UBERON:0002532!1.22e-13!604;UBERON:0000480!1.28e-13!626;UBERON:0000467!1.78e-13!625;UBERON:0000025!1.98e-13!194;UBERON:0002050!2.29e-13!605;UBERON:0005423!2.29e-13!605;UBERON:0001981!4.62e-13!60;UBERON:0007500!4.62e-13!60;UBERON:0004537!4.62e-13!60;UBERON:0006965!4.62e-13!60;UBERON:0000468!6.40e-13!659;UBERON:0001048!1.72e-12!168;UBERON:0001637!7.19e-11!42;UBERON:0003509!7.19e-11!42;UBERON:0004572!7.19e-11!42;UBERON:0003104!1.34e-10!238;UBERON:0009142!1.34e-10!238;UBERON:0000487!4.74e-10!22;UBERON:0000466!1.11e-09!126;UBERON:0003103!1.58e-09!69;UBERON:0006554!2.40e-09!44;UBERON:0001008!2.50e-09!45;UBERON:0005256!6.48e-09!143;UBERON:0002100!1.16e-08!216;UBERON:0001986!3.21e-08!18;UBERON:0004638!3.21e-08!18;UBERON:0004852!3.21e-08!18;UBERON:0004573!3.64e-08!33;UBERON:0004571!3.64e-08!33;UBERON:0004119!5.16e-08!169;UBERON:0000925!5.16e-08!169;UBERON:0006595!5.16e-08!169;UBERON:0000464!5.45e-08!104;UBERON:0000926!7.12e-08!448;UBERON:0004120!7.12e-08!448;UBERON:0006603!7.12e-08!448;UBERON:0006914!1.82e-07!25;UBERON:0001007!3.63e-07!155;UBERON:0001555!3.63e-07!155;UBERON:0007026!3.63e-07!155;UBERON:0003886!5.16e-07!63;UBERON:0005177!5.47e-07!107;UBERON:0000058!8.01e-07!26;UBERON:0000475!8.17e-07!365;UBERON:0002553!8.25e-07!70;UBERON:0000992!8.30e-07!13;UBERON:0005911!9.96e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;3.29e-11;22!UBERON:0003914;3.93e-11;74!UBERON:0000490;5.53e-10;33!UBERON:0002049;1.56e-09;75!UBERON:0007798;1.56e-09;75!UBERON:0001637;2.68e-09;42!UBERON:0003509;2.68e-09;42!UBERON:0004572;2.68e-09;42!UBERON:0006554;2.91e-09;30!UBERON:0001008;2.91e-09;30!UBERON:0004638;2.97e-09;18!UBERON:0001986;2.97e-09;18!UBERON:0004852;2.97e-09;18!UBERON:0000055;4.22e-09;65!UBERON:0007500;1.03e-08;56!UBERON:0001981;1.03e-08;56!UBERON:0004537;1.03e-08;56!UBERON:0004573;1.36e-08;33!UBERON:0004571;1.36e-08;33!UBERON:0006914;1.39e-08;25!UBERON:0002113;3.71e-08;24!UBERON:0011143;3.71e-08;24!UBERON:0000025;9.64e-08;93!UBERON:0004211;1.90e-07;10!UBERON:0009773;1.90e-07;10!UBERON:0001231;1.90e-07;10!UBERON:0004810;1.90e-07;10!UBERON:0004535;3.33e-07;109!UBERON:0000992;5.57e-07;13!UBERON:0006555;5.93e-07;15!UBERON:0004819;5.93e-07;15!UBERON:0001285;5.93e-07;15!UBERON:0007684;5.93e-07;15!UBERON:0000019;9.86e-07;19!UBERON:0000047;9.86e-07;19!UBERON:0004088;9.86e-07;19!UBERON:0010230;9.86e-07;19 | |||
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| ||
|short_description=p3@F2RL1 | |||
}} | }} |
Latest revision as of 18:56, 18 September 2015
Short description: | p3@F2RL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_F2RL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000296677, NM_005242, uc003keo.2_5end |
EntrezGene: | F2RL1 |
HGNC: | 3538 |
UniProt: | P55085Q53XJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.97e-25 | 250 |
epithelial cell | 1.15e-17 | 253 |
mesodermal cell | 1.23e-13 | 121 |
endothelial cell of vascular tree | 5.64e-11 | 24 |
smooth muscle cell | 7.00e-11 | 43 |
smooth muscle myoblast | 7.00e-11 | 43 |
electrically responsive cell | 2.96e-10 | 61 |
electrically active cell | 2.96e-10 | 61 |
endothelial cell | 1.66e-09 | 36 |
vascular associated smooth muscle cell | 1.71e-09 | 32 |
muscle cell | 2.20e-09 | 55 |
blood vessel endothelial cell | 6.85e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.85e-09 | 18 |
meso-epithelial cell | 9.44e-09 | 45 |
endodermal cell | 1.09e-08 | 58 |
endo-epithelial cell | 1.51e-08 | 42 |
muscle precursor cell | 4.75e-08 | 58 |
myoblast | 4.75e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.75e-08 | 58 |
kidney cell | 8.60e-08 | 17 |
kidney epithelial cell | 8.60e-08 | 17 |
kidney tubule cell | 1.97e-07 | 10 |
nephron tubule epithelial cell | 1.97e-07 | 10 |
epithelial cell of nephron | 6.31e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.27e-09 | 14 |
reproductive organ cancer | 4.45e-08 | 29 |
female reproductive organ cancer | 2.06e-07 | 27 |