FFCP PHASE1:Hg19::chr11:62414070..62414092,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:62414070..62414092,-
|short_description=p1@GANAB
|description=CAGE_peak_1_at_GANAB_5end
|association_with_transcript=0bp_to_ENST00000346178,ENST0000035663...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23193 | |EntrezGene=23193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4138 | |HGNC=4138 | ||
|UniProt=Q14697, | |TSSclassifier=strong | ||
|UniProt=Q14697,E9PRF8,F5H6X6 | |||
|association_with_transcript=0bp_to_ENST00000346178,ENST00000356638,ENST00000526210,ENST00000526392,ENST00000531841,ENST00000532402,ENST00000534419,ENST00000534613,ENST00000540933_5end | |||
|cluster_id=chr11:62414070..62414092,- | |||
|description=CAGE_peak_1_at_GANAB_5end | |||
|id=chr11:62414070..62414092,- | |||
|ontology_enrichment_celltype=CL:0000548!3.91e-31!679;CL:0000004!3.91e-31!679;CL:0000255!3.91e-31!679;CL:0000012!2.91e-30!682;CL:0000055!4.72e-30!180;CL:0000144!3.40e-23!625;CL:0000220!2.02e-21!246;CL:0002321!2.51e-21!248;CL:0002371!7.64e-20!591;CL:0000222!9.83e-19!119;CL:0000003!3.72e-18!722;CL:0000066!2.24e-15!254;CL:0000057!1.22e-14!75;CL:0000183!5.37e-14!59;CL:0000680!3.11e-12!57;CL:0000056!3.11e-12!57;CL:0000355!3.11e-12!57;CL:0000187!7.34e-12!54;CL:0000393!1.69e-10!60;CL:0000211!1.69e-10!60;CL:0000192!8.55e-10!42;CL:0000514!8.55e-10!42;CL:0000063!3.45e-09!578;CL:1000497!2.25e-08!18;CL:0002518!2.25e-08!18;CL:1000449!1.38e-07!16;CL:0000213!2.59e-07!57;CL:0000215!2.59e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.36e-08;17!CL:0002518;2.36e-08;17!CL:1000449;1.46e-07;15!CL:0000134;2.76e-07;55!CL:0000192;4.29e-07;43!CL:0000057;8.81e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.15e-21,250;CL:0000222,4.99e-19,121;CL:0000066,3.12e-15,253;CL:0000057,1.35e-14,76;CL:0000680,2.38e-12,58;CL:0000056,2.38e-12,58;CL:0000355,2.38e-12,58;CL:0000187,5.64e-12,55;CL:0000393,1.28e-10,61;CL:0000211,1.28e-10,61;CL:0000192,6.64e-10,43;CL:0000514,6.64e-10,43;CL:1000497,2.43e-08,17;CL:0002518,2.43e-08,17;CL:1000449,1.49e-07,15;CL:0000213,1.92e-07,58;CL:0000215,1.92e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000355;3.77e-07;58!CL:0000514;4.29e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!9.44e-17!143;UBERON:0003914!6.78e-15!118;UBERON:0000490!3.76e-14!138;UBERON:0002100!4.15e-14!216;UBERON:0002049!4.39e-12!79;UBERON:0007798!4.39e-12!79;UBERON:0003104!4.13e-11!238;UBERON:0009142!4.13e-11!238;UBERON:0000914!3.38e-10!83;UBERON:0002329!3.38e-10!83;UBERON:0003077!3.38e-10!83;UBERON:0003059!3.38e-10!83;UBERON:0007282!3.38e-10!83;UBERON:0009618!3.38e-10!83;UBERON:0007285!3.38e-10!83;UBERON:0000486!3.80e-10!82;UBERON:0004290!6.21e-10!70;UBERON:0001134!1.19e-09!61;UBERON:0002036!1.19e-09!61;UBERON:0003082!1.19e-09!61;UBERON:0000055!2.77e-09!69;UBERON:0004872!3.22e-09!84;UBERON:0002385!6.22e-09!63;UBERON:0001015!6.22e-09!63;UBERON:0000383!6.22e-09!63;UBERON:0009569!1.31e-08!113;UBERON:0004535!7.26e-08!110;UBERON:0001637!8.49e-08!42;UBERON:0003509!8.49e-08!42;UBERON:0004572!8.49e-08!42;UBERON:0000119!1.05e-07!312;UBERON:0000475!1.08e-07!365;UBERON:0004211!1.38e-07!16;UBERON:0001285!1.38e-07!16;UBERON:0007684!1.38e-07!16;UBERON:0003220!1.38e-07!16;UBERON:0004208!1.38e-07!16;UBERON:0001009!1.52e-07!113;UBERON:0002417!1.95e-07!61;UBERON:0000916!1.95e-07!61;UBERON:0001981!2.42e-07!60;UBERON:0007500!2.42e-07!60;UBERON:0004537!2.42e-07!60;UBERON:0006965!2.42e-07!60;UBERON:0006555!3.65e-07!17;UBERON:0005103!3.65e-07!17;UBERON:0000083!3.65e-07!17;UBERON:0009201!3.65e-07!17;UBERON:0004819!3.65e-07!17;UBERON:0006553!3.65e-07!17;UBERON:0003074!3.65e-07!17;UBERON:0003060!3.65e-07!17;UBERON:0000483!3.94e-07!309;UBERON:0000353!5.19e-07!17;UBERON:0006554!6.43e-07!44;UBERON:0000080!8.33e-07!18;UBERON:0002120!8.33e-07!18;UBERON:0004875!8.33e-07!18;UBERON:0005721!8.33e-07!18;UBERON:0005754!8.33e-07!18;UBERON:0007297!8.33e-07!18;UBERON:0000058!9.24e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.46e-07;15!UBERON:0004819;1.46e-07;15!UBERON:0001285;1.46e-07;15!UBERON:0007684;1.46e-07;15!UBERON:0000353;3.76e-07;15!UBERON:0003914;7.66e-07;74 | |||
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| ||
|short_description=p1@GANAB | |||
}} | }} |
Latest revision as of 20:24, 18 September 2015
Short description: | p1@GANAB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GANAB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000346178, ENST00000356638, ENST00000526210, ENST00000526392, ENST00000531841, ENST00000532402, ENST00000534419, ENST00000534613, ENST00000540933_5end |
EntrezGene: | GANAB |
HGNC: | 4138 |
UniProt: | Q14697E9PRF8F5H6X6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.15e-21 | 250 |
mesodermal cell | 4.99e-19 | 121 |
epithelial cell | 3.12e-15 | 253 |
fibroblast | 1.35e-14 | 76 |
muscle precursor cell | 2.38e-12 | 58 |
myoblast | 2.38e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.38e-12 | 58 |
muscle cell | 5.64e-12 | 55 |
electrically responsive cell | 1.28e-10 | 61 |
electrically active cell | 1.28e-10 | 61 |
smooth muscle cell | 6.64e-10 | 43 |
smooth muscle myoblast | 6.64e-10 | 43 |
kidney cell | 2.43e-08 | 17 |
kidney epithelial cell | 2.43e-08 | 17 |
epithelial cell of nephron | 1.49e-07 | 15 |
lining cell | 1.92e-07 | 58 |
barrier cell | 1.92e-07 | 58 |