FFCP PHASE1:Hg19::chr6:42749782..42749817,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23506 | |EntrezGene=23506 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21111 | |HGNC=21111 | ||
|TSSclassifier=strong | |||
|UniProt=Q6AI39,F5H616 | |UniProt=Q6AI39,F5H616 | ||
|association_with_transcript=0bp_to_ENST00000314073,ENST00000536004,uc003osm.1,uc003osn.1,uc011duw.1_5end | |association_with_transcript=0bp_to_ENST00000314073,ENST00000536004,uc003osm.1,uc003osn.1,uc011duw.1_5end | ||
|cluster_id=chr6:42749782..42749817,+ | |||
|description=CAGE_peak_1_at_KIAA0240_5end | |description=CAGE_peak_1_at_KIAA0240_5end | ||
|id=chr6:42749782..42749817,+ | |id=chr6:42749782..42749817,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.09e-18!140;CL:0000037!8.97e-17!172;CL:0000566!8.97e-17!172;CL:0002032!8.98e-16!165;CL:0000837!8.98e-16!165;CL:0000988!1.51e-14!182;CL:0002031!6.07e-14!124;CL:0000542!1.30e-13!53;CL:0000051!1.30e-13!53;CL:0000838!1.84e-13!52;CL:0002087!8.99e-13!119;CL:0000791!1.38e-09!18;CL:0000789!1.38e-09!18;CL:0002420!1.38e-09!18;CL:0002419!1.38e-09!18;CL:0000790!1.38e-09!18;CL:0000084!1.19e-07!25;CL:0000827!1.19e-07!25;CL:0000625!5.71e-07!11 | |ontology_enrichment_celltype=CL:0000738!7.09e-18!140;CL:0000037!8.97e-17!172;CL:0000566!8.97e-17!172;CL:0002032!8.98e-16!165;CL:0000837!8.98e-16!165;CL:0000988!1.51e-14!182;CL:0002031!6.07e-14!124;CL:0000542!1.30e-13!53;CL:0000051!1.30e-13!53;CL:0000838!1.84e-13!52;CL:0002087!8.99e-13!119;CL:0000791!1.38e-09!18;CL:0000789!1.38e-09!18;CL:0002420!1.38e-09!18;CL:0002419!1.38e-09!18;CL:0000790!1.38e-09!18;CL:0000084!1.19e-07!25;CL:0000827!1.19e-07!25;CL:0000625!5.71e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.88e-10;18!CL:0000789;1.88e-10;18!CL:0002419;1.88e-10;18!CL:0000542;1.27e-08;53!CL:0000625;1.48e-07;11!CL:0000084;2.53e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.09e-17,136;CL:0000037,3.05e-16,168;CL:0002032,1.23e-15,161;CL:0000837,1.23e-15,161;CL:0000988,1.21e-14,177;CL:0000542,5.35e-14,53;CL:0000051,5.35e-14,53;CL:0000838,8.00e-14,52;CL:0002031,2.92e-13,120;CL:0002087,5.26e-12,115;CL:0000791,1.17e-10,18;CL:0000789,1.17e-10,18;CL:0002420,1.17e-10,18;CL:0002419,1.17e-10,18;CL:0000790,1.17e-10,18;CL:0000625,1.07e-07,11;CL:0000084,1.93e-07,25;CL:0000827,1.93e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.88e-10;18!CL:0000051;1.27e-08;53!UBERON:0006601;4.84e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.11e-39!115;UBERON:0001049!3.59e-18!57;UBERON:0005068!3.59e-18!57;UBERON:0006241!3.59e-18!57;UBERON:0007135!3.59e-18!57;UBERON:0002780!5.75e-16!41;UBERON:0001890!5.75e-16!41;UBERON:0006240!5.75e-16!41;UBERON:0001017!6.68e-16!82;UBERON:0005743!7.36e-16!86;UBERON:0000073!1.71e-15!94;UBERON:0001016!1.71e-15!94;UBERON:0003080!1.76e-15!42;UBERON:0000955!2.62e-14!69;UBERON:0006238!2.62e-14!69;UBERON:0002616!5.15e-14!59;UBERON:0001893!8.78e-13!34;UBERON:0002020!2.25e-12!34;UBERON:0003528!2.25e-12!34;UBERON:0002791!2.70e-12!33;UBERON:0001869!9.54e-12!32;UBERON:0002619!1.83e-11!22;UBERON:0001950!1.36e-10!20;UBERON:0000956!1.21e-09!25;UBERON:0000203!1.21e-09!25;UBERON:0002346!1.75e-09!90;UBERON:0003075!4.46e-09!86;UBERON:0007284!4.46e-09!86;UBERON:0003056!6.25e-08!61 | |ontology_enrichment_uberon=UBERON:0007023!4.11e-39!115;UBERON:0001049!3.59e-18!57;UBERON:0005068!3.59e-18!57;UBERON:0006241!3.59e-18!57;UBERON:0007135!3.59e-18!57;UBERON:0002780!5.75e-16!41;UBERON:0001890!5.75e-16!41;UBERON:0006240!5.75e-16!41;UBERON:0001017!6.68e-16!82;UBERON:0005743!7.36e-16!86;UBERON:0000073!1.71e-15!94;UBERON:0001016!1.71e-15!94;UBERON:0003080!1.76e-15!42;UBERON:0000955!2.62e-14!69;UBERON:0006238!2.62e-14!69;UBERON:0002616!5.15e-14!59;UBERON:0001893!8.78e-13!34;UBERON:0002020!2.25e-12!34;UBERON:0003528!2.25e-12!34;UBERON:0002791!2.70e-12!33;UBERON:0001869!9.54e-12!32;UBERON:0002619!1.83e-11!22;UBERON:0001950!1.36e-10!20;UBERON:0000956!1.21e-09!25;UBERON:0000203!1.21e-09!25;UBERON:0002346!1.75e-09!90;UBERON:0003075!4.46e-09!86;UBERON:0007284!4.46e-09!86;UBERON:0003056!6.25e-08!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.51e-13;41!UBERON:0001890;5.51e-13;41!UBERON:0002619;8.84e-13;22!UBERON:0000073;2.01e-12;53!UBERON:0002616;2.01e-12;53!UBERON:0001893;2.90e-12;34!UBERON:0001950;7.39e-12;20!UBERON:0003528;7.67e-12;34!UBERON:0002020;7.67e-12;34!UBERON:0001869;8.61e-12;32!UBERON:0002791;1.01e-11;32!UBERON:0007023;1.16e-11;114!UBERON:0000956;1.18e-10;25!UBERON:0000203;1.18e-10;25!UBERON:0000955;6.85e-08;68!UBERON:0001017;8.98e-08;75!UBERON:0001016;1.96e-07;83!UBERON:0000178;4.23e-07;15!UBERON:0000179;4.23e-07;15!UBERON:0000463;4.23e-07;15 | |||
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| ||
|short_description=p1@KIAA0240 | |short_description=p1@KIAA0240 | ||
}} | }} |
Latest revision as of 20:36, 18 September 2015
Short description: | p1@KIAA0240 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA0240_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000314073, ENST00000536004, uc003osm.1, uc003osn.1, uc011duw.1_5end |
EntrezGene: | KIAA0240 |
HGNC: | 21111 |
UniProt: | Q6AI39F5H616 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.09e-17 | 136 |
hematopoietic stem cell | 3.05e-16 | 168 |
hematopoietic oligopotent progenitor cell | 1.23e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-15 | 161 |
hematopoietic cell | 1.21e-14 | 177 |
lymphocyte | 5.35e-14 | 53 |
common lymphoid progenitor | 5.35e-14 | 53 |
lymphoid lineage restricted progenitor cell | 8.00e-14 | 52 |
hematopoietic lineage restricted progenitor cell | 2.92e-13 | 120 |
nongranular leukocyte | 5.26e-12 | 115 |
mature alpha-beta T cell | 1.17e-10 | 18 |
alpha-beta T cell | 1.17e-10 | 18 |
immature T cell | 1.17e-10 | 18 |
mature T cell | 1.17e-10 | 18 |
immature alpha-beta T cell | 1.17e-10 | 18 |
CD8-positive, alpha-beta T cell | 1.07e-07 | 11 |
T cell | 1.93e-07 | 25 |
pro-T cell | 1.93e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.49e-43 | 114 |
neural tube | 1.41e-21 | 56 |
neural rod | 1.41e-21 | 56 |
future spinal cord | 1.41e-21 | 56 |
neural keel | 1.41e-21 | 56 |
regional part of nervous system | 3.05e-20 | 53 |
regional part of brain | 3.05e-20 | 53 |
regional part of forebrain | 7.38e-18 | 41 |
forebrain | 7.38e-18 | 41 |
anterior neural tube | 7.38e-18 | 41 |
future forebrain | 7.38e-18 | 41 |
central nervous system | 1.02e-17 | 81 |
nervous system | 9.77e-17 | 89 |
brain | 4.08e-16 | 68 |
future brain | 4.08e-16 | 68 |
telencephalon | 3.01e-14 | 34 |
brain grey matter | 8.73e-14 | 34 |
gray matter | 8.73e-14 | 34 |
cerebral hemisphere | 4.50e-13 | 32 |
regional part of telencephalon | 4.96e-13 | 32 |
neurectoderm | 5.54e-13 | 86 |
neural plate | 7.57e-13 | 82 |
presumptive neural plate | 7.57e-13 | 82 |
regional part of cerebral cortex | 8.64e-13 | 22 |
neocortex | 8.37e-12 | 20 |
cerebral cortex | 1.09e-10 | 25 |
pallium | 1.09e-10 | 25 |
pre-chordal neural plate | 1.20e-10 | 61 |
ecto-epithelium | 6.87e-08 | 104 |
organ system subdivision | 2.22e-07 | 223 |
blood | 4.40e-07 | 15 |
haemolymphatic fluid | 4.40e-07 | 15 |
organism substance | 4.40e-07 | 15 |