FFCP PHASE1:Hg19::chr12:52913583..52913599,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:52913583..52913599,- to FFCP PHASE1:Hg19::chr12:52913583..52913599,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3852 | |EntrezGene=3852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6442 | |HGNC=6442 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-182bp_to_ENST00000551013_5end | |||
|cluster_id=chr12:52913583..52913599,- | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_8_at_KRT5_5end | |||
|id=chr12:52913583..52913599,- | |||
|ontology_enrichment_celltype=CL:0002076!8.83e-31!43;CL:0000223!2.50e-20!59;CL:0000066!6.32e-18!254;CL:0002159!6.44e-18!13;CL:0002368!1.27e-17!13;CL:0002251!6.71e-16!21;CL:0000622!8.30e-13!5;CL:0000076!9.49e-11!62;CL:0000154!1.39e-10!6;CL:0002202!4.49e-10!9;CL:0002632!4.49e-10!9;CL:0000244!8.55e-10!4;CL:0000731!8.55e-10!4;CL:0002328!7.66e-09!3;CL:0000068!1.90e-08!3;CL:0000069!1.90e-08!3;CL:0000307!1.90e-08!3;CL:0000377!1.90e-08!3;CL:0002623!2.73e-08!3;CL:0002077!3.76e-08!33;CL:0002166!4.51e-08!3;CL:0000362!6.47e-08!8;CL:0002621!6.57e-08!3;CL:0000349!9.52e-08!3;CL:0002577!9.52e-08!3;CL:0000240!4.25e-07!6;CL:0000311!4.25e-07!6;CL:0000079!4.25e-07!6;CL:0000237!4.25e-07!6;CL:0000036!4.25e-07!6;CL:0000357!4.25e-07!6;CL:0000114!4.25e-07!6;CL:0000150!7.07e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.84e-27;13!CL:0002076;1.04e-26;42!CL:0002159;8.84e-26;14!CL:0000622;3.40e-19;5!CL:0000154;6.02e-16;6!CL:0002202;1.55e-15;9!CL:0002632;1.55e-15;9!CL:0002251;1.07e-13;20!CL:0002328;4.99e-13;3!CL:0000307;2.17e-12;3!CL:0002623;4.89e-12;3!CL:0002166;1.03e-11;3!CL:0002621;1.41e-11;3!CL:0002577;2.71e-11;3!CL:0000362;1.02e-10;9!CL:0000240;1.22e-10;6!CL:0000311;1.22e-10;6!CL:0000079;1.22e-10;6!CL:0000237;1.22e-10;6!CL:0000150;1.60e-10;9!CL:0002077;3.30e-10;34!CL:0000575;4.03e-09;2!CL:0000244;4.55e-09;4!CL:0000731;4.55e-09;4!CL:0002327;6.51e-09;4!CL:0000317;6.94e-09;2!CL:1000448;6.94e-09;2!CL:0002308;6.94e-09;2!CL:0002140;6.94e-09;2!CL:0000312;1.34e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.34e-34,42;CL:0002368,1.60e-27,13;CL:0002159,7.66e-26,14;CL:0000223,1.47e-23,58;CL:0000066,5.14e-20,253;CL:0000622,2.93e-19,5;CL:0000154,5.32e-16,6;CL:0002202,1.55e-15,9;CL:0002632,1.55e-15,9;CL:0002251,9.83e-14,20;CL:0002328,5.09e-13,3;CL:0000068,2.13e-12,3;CL:0000069,2.13e-12,3;CL:0000307,2.13e-12,3;CL:0000377,2.13e-12,3;CL:0002623,3.76e-12,3;CL:0002166,8.24e-12,3;CL:0002621,1.49e-11,3;CL:0002077,2.39e-11,34;CL:0002577,2.66e-11,3;CL:0000362,1.03e-10,9;CL:0000240,1.15e-10,6;CL:0000311,1.15e-10,6;CL:0000079,1.15e-10,6;CL:0000237,1.15e-10,6;CL:0000036,1.15e-10,6;CL:0000357,1.15e-10,6;CL:0000114,1.15e-10,6;CL:0000150,1.48e-10,9;CL:0000575,4.03e-09,2;CL:0000244,4.37e-09,4;CL:0000731,4.37e-09,4;CL:0002327,6.42e-09,4;CL:0000317,7.80e-09,2;CL:1000448,7.80e-09,2;CL:0002308,7.80e-09,2;CL:0002140,7.80e-09,2;CL:0002321,2.04e-08,250;CL:0000312,1.27e-07,5;CL:0000076,3.34e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;9.53e-13;58!CL:0000377;2.17e-12;3!CL:0000357;1.22e-10;6!CL:0000114;1.22e-10;6 | |||
|ontology_enrichment_disease=DOID:1749!3.90e-16!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!4.91e-21!21;UBERON:0001004!1.37e-20!72;UBERON:0000165!3.76e-17!28;UBERON:0000930!3.76e-17!28;UBERON:0000161!1.37e-16!35;UBERON:0004119!1.79e-14!169;UBERON:0000925!1.79e-14!169;UBERON:0006595!1.79e-14!169;UBERON:0003102!5.70e-13!95;UBERON:0000974!1.61e-12!10;UBERON:0005631!3.09e-11!14;UBERON:0000158!3.09e-11!14;UBERON:0001444!3.90e-11!48;UBERON:0003729!4.04e-11!5;UBERON:0000065!9.58e-11!53;UBERON:0003408!3.60e-10!10;UBERON:0007196!3.79e-10!14;UBERON:0001558!3.79e-10!14;UBERON:0001044!9.59e-10!6;UBERON:0003293!9.59e-10!6;UBERON:0003294!9.59e-10!6;UBERON:0010047!9.59e-10!6;UBERON:0000167!9.59e-10!6;UBERON:0003343!6.81e-09!4;UBERON:0004785!6.81e-09!4;UBERON:0004815!7.66e-09!3;UBERON:0002031!7.66e-09!3;UBERON:0000078!1.16e-08!18;UBERON:0003126!2.31e-08!7;UBERON:0001005!2.31e-08!7;UBERON:0001949!6.57e-08!3;UBERON:0000365!8.06e-08!5;UBERON:0000305!1.42e-07!7;UBERON:0001723!2.16e-07!3;UBERON:0001033!2.16e-07!3;UBERON:0010056!2.16e-07!3;UBERON:0001007!2.76e-07!155;UBERON:0001555!2.76e-07!155;UBERON:0007026!2.76e-07!155;UBERON:0000077!3.55e-07!130;UBERON:0001042!3.89e-07!10;UBERON:0009145!3.89e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.99e-13;3!UBERON:0002031;4.99e-13;3!UBERON:0001949;1.41e-11;3!UBERON:0000165;2.13e-11;28!UBERON:0000486;1.43e-10;12!UBERON:0007196;5.04e-09;15!UBERON:0001558;5.04e-09;15!UBERON:0001911;6.51e-09;4!UBERON:0001708;6.78e-09;4!UBERON:0008895;6.78e-09;4!UBERON:0002419;6.94e-09;2!UBERON:0007771;6.94e-09;2!UBERON:0003297;6.94e-09;2!UBERON:0001821;6.94e-09;2!UBERON:0003487;6.94e-09;2!UBERON:0001820;6.94e-09;2!UBERON:0001003;8.35e-09;15!UBERON:0007376;8.35e-09;15!UBERON:0000161;9.95e-09;19!UBERON:0000166;9.95e-09;19!UBERON:0001987;1.39e-08;4!UBERON:0010371;2.67e-08;31!UBERON:0002185;5.80e-08;5!UBERON:0000365;2.48e-07;5!UBERON:0011159;3.40e-07;5!UBERON:0003729;5.57e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.05e-16,99;UBERON:0001004,1.17e-13,74;UBERON:0004119,1.51e-13,160;UBERON:0000925,1.51e-13,160;UBERON:0006595,1.51e-13,160;UBERON:0004815,5.09e-13,3;UBERON:0002031,5.09e-13,3;UBERON:0000166,4.02e-12,22;UBERON:0000153,1.14e-11,62;UBERON:0007811,1.14e-11,62;UBERON:0000033,1.33e-11,56;UBERON:0001949,1.49e-11,3;UBERON:0000165,5.92e-11,29;UBERON:0000930,5.92e-11,29;UBERON:0000161,2.77e-10,36;UBERON:0007196,5.04e-09,15;UBERON:0001558,5.04e-09,15;UBERON:0001708,5.76e-09,4;UBERON:0008895,5.76e-09,4;UBERON:0001911,6.42e-09,4;UBERON:0005333,6.42e-09,4;UBERON:0008425,6.42e-09,4;UBERON:0005311,6.42e-09,4;UBERON:0002419,7.80e-09,2;UBERON:0007771,7.80e-09,2;UBERON:0003297,7.80e-09,2;UBERON:0001821,7.80e-09,2;UBERON:0003487,7.80e-09,2;UBERON:0001820,7.80e-09,2;UBERON:0005089,7.80e-09,2;UBERON:0005088,7.80e-09,2;UBERON:0001003,8.41e-09,15;UBERON:0007376,8.41e-09,15;UBERON:0007383,8.41e-09,15;UBERON:0001987,1.37e-08,4;UBERON:0004340,1.37e-08,4;UBERON:0001444,1.57e-08,49;UBERON:0002185,5.87e-08,5;UBERON:0000065,1.66e-07,54;UBERON:0000365,2.40e-07,5;UBERON:0011159,2.99e-07,5;UBERON:0003729,5.68e-07,13 | |||
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| ||
|short_description=p8@KRT5 | |||
}} | }} |
Latest revision as of 23:41, 18 September 2015
Short description: | p8@KRT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KRT5_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | -182bp_to_ENST00000551013_5end |
EntrezGene: | KRT5 |
HGNC: | 6442 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data