FFCP PHASE1:Hg19::chr21:47878757..47878981,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23181 | |EntrezGene=23181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17217 | |HGNC=17217 | ||
|TSSclassifier=strong | |||
|UniProt=E9PER1,C9JYN1,E7EMA5,B4E0F0,Q14689,Q96NX2 | |UniProt=E9PER1,C9JYN1,E7EMA5,B4E0F0,Q14689,Q96NX2 | ||
|association_with_transcript=0bp_to_ENST00000318711,ENST00000358985,ENST00000400274,ENST00000427143,ENST00000435722,ENST00000457905,ENST00000466639,NM_001146114,NM_001146115,NM_001146116,NM_015151,NM_206889,NM_206890,NM_206891,uc002zjl.2,uc002zjm.2,uc002zjn.2,uc002zjo.2,uc010gql.2,uc011afy.1,uc011afz.1_5end | |association_with_transcript=0bp_to_ENST00000318711,ENST00000358985,ENST00000400274,ENST00000427143,ENST00000435722,ENST00000457905,ENST00000466639,NM_001146114,NM_001146115,NM_001146116,NM_015151,NM_206889,NM_206890,NM_206891,uc002zjl.2,uc002zjm.2,uc002zjn.2,uc002zjo.2,uc010gql.2,uc011afy.1,uc011afz.1_5end | ||
|cluster_id=chr21:47878757..47878981,+ | |||
|description=CAGE_peak_1_at_DIP2A_5end | |description=CAGE_peak_1_at_DIP2A_5end | ||
|id=chr21:47878757..47878981,+ | |id=chr21:47878757..47878981,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.44e-09!18;CL:0000789!2.44e-09!18;CL:0002420!2.44e-09!18;CL:0002419!2.44e-09!18;CL:0000790!2.44e-09!18;CL:0000084!6.82e-07!25;CL:0000827!6.82e-07!25;CL:0000625!8.36e-07!11 | |ontology_enrichment_celltype=CL:0000791!2.44e-09!18;CL:0000789!2.44e-09!18;CL:0002420!2.44e-09!18;CL:0002419!2.44e-09!18;CL:0000790!2.44e-09!18;CL:0000084!6.82e-07!25;CL:0000827!6.82e-07!25;CL:0000625!8.36e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.05e-09;18!CL:0000789;2.05e-09;18!CL:0002419;2.05e-09;18!CL:0000084;5.51e-07;25!CL:0000625;8.47e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.44e-09,18;CL:0000789,2.44e-09,18;CL:0002420,2.44e-09,18;CL:0002419,2.44e-09,18;CL:0000790,2.44e-09,18;CL:0000084,6.82e-07,25;CL:0000827,6.82e-07,25;CL:0000625,8.36e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.05e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.83e-26!115;UBERON:0001049!4.10e-19!57;UBERON:0005068!4.10e-19!57;UBERON:0006241!4.10e-19!57;UBERON:0007135!4.10e-19!57;UBERON:0002616!6.69e-15!59;UBERON:0003080!2.11e-14!42;UBERON:0001017!4.74e-14!82;UBERON:0002780!5.67e-14!41;UBERON:0001890!5.67e-14!41;UBERON:0006240!5.67e-14!41;UBERON:0000955!6.66e-14!69;UBERON:0006238!6.66e-14!69;UBERON:0003075!2.55e-13!86;UBERON:0007284!2.55e-13!86;UBERON:0005743!3.03e-13!86;UBERON:0002346!3.42e-13!90;UBERON:0000073!4.24e-12!94;UBERON:0001016!4.24e-12!94;UBERON:0001893!4.66e-11!34;UBERON:0002020!6.41e-11!34;UBERON:0003528!6.41e-11!34;UBERON:0002791!1.09e-10!33;UBERON:0001869!4.72e-10!32;UBERON:0003056!9.50e-10!61;UBERON:0000153!5.90e-09!129;UBERON:0007811!5.90e-09!129;UBERON:0002619!2.29e-08!22;UBERON:0001950!6.92e-08!20;UBERON:0000956!9.66e-08!25;UBERON:0000203!9.66e-08!25;UBERON:0000033!1.09e-07!123;UBERON:0000924!5.21e-07!173;UBERON:0006601!5.21e-07!173;UBERON:0004121!6.25e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!5.83e-26!115;UBERON:0001049!4.10e-19!57;UBERON:0005068!4.10e-19!57;UBERON:0006241!4.10e-19!57;UBERON:0007135!4.10e-19!57;UBERON:0002616!6.69e-15!59;UBERON:0003080!2.11e-14!42;UBERON:0001017!4.74e-14!82;UBERON:0002780!5.67e-14!41;UBERON:0001890!5.67e-14!41;UBERON:0006240!5.67e-14!41;UBERON:0000955!6.66e-14!69;UBERON:0006238!6.66e-14!69;UBERON:0003075!2.55e-13!86;UBERON:0007284!2.55e-13!86;UBERON:0005743!3.03e-13!86;UBERON:0002346!3.42e-13!90;UBERON:0000073!4.24e-12!94;UBERON:0001016!4.24e-12!94;UBERON:0001893!4.66e-11!34;UBERON:0002020!6.41e-11!34;UBERON:0003528!6.41e-11!34;UBERON:0002791!1.09e-10!33;UBERON:0001869!4.72e-10!32;UBERON:0003056!9.50e-10!61;UBERON:0000153!5.90e-09!129;UBERON:0007811!5.90e-09!129;UBERON:0002619!2.29e-08!22;UBERON:0001950!6.92e-08!20;UBERON:0000956!9.66e-08!25;UBERON:0000203!9.66e-08!25;UBERON:0000033!1.09e-07!123;UBERON:0000924!5.21e-07!173;UBERON:0006601!5.21e-07!173;UBERON:0004121!6.25e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.09e-10;41!UBERON:0001890;2.09e-10;41!UBERON:0000073;3.38e-10;53!UBERON:0002616;3.38e-10;53!UBERON:0001893;2.22e-09;34!UBERON:0003528;2.55e-09;34!UBERON:0002020;2.55e-09;34!UBERON:0002791;3.94e-09;32!UBERON:0001869;4.64e-09;32!UBERON:0002619;2.61e-08;22!UBERON:0001950;8.14e-08;20!UBERON:0000956;9.90e-08;25!UBERON:0000203;9.90e-08;25!UBERON:0007023;2.11e-07;114!UBERON:0000955;4.42e-07;68 | |||
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| ||
|short_description=p1@DIP2A | |short_description=p1@DIP2A | ||
}} | }} |
Latest revision as of 00:02, 19 September 2015
Short description: | p1@DIP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DIP2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000318711, ENST00000358985, ENST00000400274, ENST00000427143, ENST00000435722, ENST00000457905, ENST00000466639, NM_001146114, NM_001146115, NM_001146116, NM_015151, NM_206889, NM_206890, NM_206891, uc002zjl.2, uc002zjm.2, uc002zjn.2, uc002zjo.2, uc010gql.2, uc011afy.1, uc011afz.1_5end |
EntrezGene: | DIP2A |
HGNC: | 17217 |
UniProt: | E9PER1C9JYN1E7EMA5B4E0F0Q14689Q96NX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.44e-09 | 18 |
alpha-beta T cell | 2.44e-09 | 18 |
immature T cell | 2.44e-09 | 18 |
mature T cell | 2.44e-09 | 18 |
immature alpha-beta T cell | 2.44e-09 | 18 |
T cell | 6.82e-07 | 25 |
pro-T cell | 6.82e-07 | 25 |
CD8-positive, alpha-beta T cell | 8.36e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.40e-25 | 114 |
neural tube | 1.13e-18 | 56 |
neural rod | 1.13e-18 | 56 |
future spinal cord | 1.13e-18 | 56 |
neural keel | 1.13e-18 | 56 |
regional part of nervous system | 2.71e-17 | 53 |
regional part of brain | 2.71e-17 | 53 |
regional part of forebrain | 5.67e-14 | 41 |
forebrain | 5.67e-14 | 41 |
anterior neural tube | 5.67e-14 | 41 |
future forebrain | 5.67e-14 | 41 |
central nervous system | 1.14e-13 | 81 |
neural plate | 1.34e-13 | 82 |
presumptive neural plate | 1.34e-13 | 82 |
brain | 1.65e-13 | 68 |
future brain | 1.65e-13 | 68 |
neurectoderm | 1.91e-13 | 86 |
nervous system | 2.02e-12 | 89 |
ecto-epithelium | 1.33e-11 | 104 |
telencephalon | 4.66e-11 | 34 |
brain grey matter | 6.41e-11 | 34 |
gray matter | 6.41e-11 | 34 |
regional part of telencephalon | 3.88e-10 | 32 |
cerebral hemisphere | 4.72e-10 | 32 |
pre-chordal neural plate | 7.14e-10 | 61 |
regional part of cerebral cortex | 2.29e-08 | 22 |
neocortex | 6.92e-08 | 20 |
cerebral cortex | 9.66e-08 | 25 |
pallium | 9.66e-08 | 25 |