FFCP PHASE1:Hg19::chr19:48076391..48076408,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|EntrezGene= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=84215 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
| | |cluster_id=chr19:48076391..48076408,- | ||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_ZNF541_5end | |||
|id=chr19:48076391..48076408,- | |id=chr19:48076391..48076408,- | ||
|ontology_enrichment_celltype=CL:0002535!2.38e-07!2 | |ontology_enrichment_celltype=CL:0002535!2.38e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;4.77e-57;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,6.36e-57,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.16e-29;1!UBERON:0009117;2.00e-12;10!UBERON:0005564;2.00e-12;10!UBERON:0003056;1.09e-10;3 | |||
|ontology_enrichment_disease=DOID:114!3.93e-07!2 | |ontology_enrichment_disease=DOID:114!3.93e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4362;1.44e-23;5!DOID:5093;2.43e-08;4!DOID:1612;2.43e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.61e-23,5;DOID:5093,2.26e-08,4;DOID:1612,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.23e-27!115;UBERON:0001049!6.25e-27!57;UBERON:0005068!6.25e-27!57;UBERON:0006241!6.25e-27!57;UBERON:0007135!6.25e-27!57;UBERON:0001893!2.84e-26!34;UBERON:0002780!7.87e-26!41;UBERON:0001890!7.87e-26!41;UBERON:0006240!7.87e-26!41;UBERON:0002616!8.76e-26!59;UBERON:0003080!4.35e-25!42;UBERON:0002791!1.52e-24!33;UBERON:0002619!1.13e-23!22;UBERON:0002020!1.59e-23!34;UBERON:0003528!1.59e-23!34;UBERON:0001950!6.30e-23!20;UBERON:0001869!1.65e-22!32;UBERON:0000955!2.29e-22!69;UBERON:0006238!2.29e-22!69;UBERON:0003075!1.07e-21!86;UBERON:0007284!1.07e-21!86;UBERON:0000956!1.73e-20!25;UBERON:0000203!1.73e-20!25;UBERON:0002346!2.24e-20!90;UBERON:0005743!1.05e-19!86;UBERON:0001017!2.57e-19!82;UBERON:0003056!4.43e-19!61;UBERON:0000073!1.08e-18!94;UBERON:0001016!1.08e-18!94;UBERON:0000153!1.08e-13!129;UBERON:0007811!1.08e-13!129;UBERON:0000033!1.17e-12!123;UBERON:0000200!5.46e-11!6;UBERON:0000064!2.25e-10!219;UBERON:0004121!3.16e-10!169;UBERON:0000924!8.38e-10!173;UBERON:0006601!8.38e-10!173;UBERON:0002021!1.26e-09!5;UBERON:0002771!1.23e-08!3;UBERON:0001871!2.49e-08!7;UBERON:0002298!8.05e-08!8;UBERON:0006955!2.38e-07!2;UBERON:0004801!2.38e-07!2;UBERON:0005162!5.58e-07!2;UBERON:0000122!5.58e-07!2;UBERON:0004732!6.35e-07!13 | |ontology_enrichment_uberon=UBERON:0007023!1.23e-27!115;UBERON:0001049!6.25e-27!57;UBERON:0005068!6.25e-27!57;UBERON:0006241!6.25e-27!57;UBERON:0007135!6.25e-27!57;UBERON:0001893!2.84e-26!34;UBERON:0002780!7.87e-26!41;UBERON:0001890!7.87e-26!41;UBERON:0006240!7.87e-26!41;UBERON:0002616!8.76e-26!59;UBERON:0003080!4.35e-25!42;UBERON:0002791!1.52e-24!33;UBERON:0002619!1.13e-23!22;UBERON:0002020!1.59e-23!34;UBERON:0003528!1.59e-23!34;UBERON:0001950!6.30e-23!20;UBERON:0001869!1.65e-22!32;UBERON:0000955!2.29e-22!69;UBERON:0006238!2.29e-22!69;UBERON:0003075!1.07e-21!86;UBERON:0007284!1.07e-21!86;UBERON:0000956!1.73e-20!25;UBERON:0000203!1.73e-20!25;UBERON:0002346!2.24e-20!90;UBERON:0005743!1.05e-19!86;UBERON:0001017!2.57e-19!82;UBERON:0003056!4.43e-19!61;UBERON:0000073!1.08e-18!94;UBERON:0001016!1.08e-18!94;UBERON:0000153!1.08e-13!129;UBERON:0007811!1.08e-13!129;UBERON:0000033!1.17e-12!123;UBERON:0000200!5.46e-11!6;UBERON:0000064!2.25e-10!219;UBERON:0004121!3.16e-10!169;UBERON:0000924!8.38e-10!173;UBERON:0006601!8.38e-10!173;UBERON:0002021!1.26e-09!5;UBERON:0002771!1.23e-08!3;UBERON:0001871!2.49e-08!7;UBERON:0002298!8.05e-08!8;UBERON:0006955!2.38e-07!2;UBERON:0004801!2.38e-07!2;UBERON:0005162!5.58e-07!2;UBERON:0000122!5.58e-07!2;UBERON:0004732!6.35e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;4.77e-57;2!UBERON:0004801;4.77e-57;2!UBERON:0000941;3.16e-29;1!UBERON:0001785;3.16e-29;1!UBERON:0002464;3.16e-29;1!UBERON:0004904;3.16e-29;1!UBERON:0001021;3.16e-29;1!UBERON:0000002;7.84e-20;6!UBERON:0001560;7.84e-20;6!UBERON:0003714;2.37e-15;2!UBERON:0005162;2.37e-15;2!UBERON:0000122;2.37e-15;2!UBERON:0000473;2.85e-15;8!UBERON:0003135;2.18e-11;11!UBERON:0003133;2.95e-10;44!UBERON:0000995;1.21e-07;17!UBERON:0003975;2.86e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,6.36e-57,2;UBERON:0004801,6.36e-57,2;UBERON:0000941,3.16e-29,1;UBERON:0001785,3.16e-29,1;UBERON:0002464,3.16e-29,1;UBERON:0004904,3.16e-29,1;UBERON:0001021,3.16e-29,1;UBERON:0003902,3.16e-29,1;UBERON:0005425,3.16e-29,1;UBERON:0000002,8.63e-20,6;UBERON:0001560,8.63e-20,6;UBERON:0003714,2.37e-15,2;UBERON:0005162,2.37e-15,2;UBERON:0000122,2.37e-15,2;UBERON:0000473,2.85e-15,8;UBERON:0003135,2.18e-11,11;UBERON:0003133,5.74e-10,48;UBERON:0001781,2.43e-08,4;UBERON:0005156,3.43e-08,59;UBERON:0000990,3.43e-08,59 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.562677665642051,0,0,0,0,0,4.78672220923124,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0,0,0.173624994933292,0,0.482385754501632,0,0.331737779793674,0,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13176968554523,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.798169295285756,0.615349092722265,0.252071696221718,0.207471757392654,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0.206686796501184,0.443910671357348,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.271878931907327,0.328863867814245,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,3.33426272160253,6.69910325390446,0,0.103432995861895,0,0,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.562677665642051,0,0,0,0,0,4.78672220923124,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0,0,0.173624994933292,0,0.482385754501632,0,0.331737779793674,0,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13176968554523,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.798169295285756,0.615349092722265,0.252071696221718,0.207471757392654,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0.206686796501184,0.443910671357348,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.271878931907327,0.328863867814245,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,3.33426272160253,6.69910325390446,0,0.103432995861895,0,0,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description= | |short_description=p4@ZNF541 | ||
}} | }} |
Latest revision as of 00:19, 19 September 2015
Short description: | p4@ZNF541 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZNF541_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | ZNF541 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 6.36e-57 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 6.36e-57 | 2 |
cervix epithelium | 6.36e-57 | 2 |
cranial nerve II | 3.16e-29 | 1 |
cranial nerve | 3.16e-29 | 1 |
nerve trunk | 3.16e-29 | 1 |
nerve connecting eye with brain | 3.16e-29 | 1 |
nerve | 3.16e-29 | 1 |
retinal neural layer | 3.16e-29 | 1 |
presumptive neural retina | 3.16e-29 | 1 |
uterine cervix | 8.63e-20 | 6 |
neck of organ | 8.63e-20 | 6 |
neural tissue | 2.37e-15 | 2 |
multi cell component structure | 2.37e-15 | 2 |
neuron projection bundle | 2.37e-15 | 2 |
testis | 2.85e-15 | 8 |
male reproductive organ | 2.18e-11 | 11 |
reproductive organ | 5.74e-10 | 48 |
layer of retina | 2.43e-08 | 4 |
reproductive structure | 3.43e-08 | 59 |
reproductive system | 3.43e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.61e-23 | 5 |
thoracic cancer | 2.26e-08 | 4 |
breast cancer | 2.26e-08 | 4 |