FFCP PHASE1:Hg19::chr1:183441005..183441026,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:183441005..183441026,+ to FFCP PHASE1:Hg19::chr1:183441005..183441026,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9887 | |EntrezGene=9887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16792 | |HGNC=16792 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEK3 | |UniProt=E9PEK3 | ||
|association_with_transcript=-324bp_to_ENST00000440812_5end | |||
|cluster_id=chr1:183441005..183441026,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_10_at_SMG7_5end | |||
|id=chr1:183441005..183441026,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;2.73e-29;1!CL:0000557;2.73e-29;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10!UBERON:0005062;2.35e-08;4!UBERON:0007284;2.35e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!2.00e-10!34;UBERON:0002020!2.84e-10!34;UBERON:0003528!2.84e-10!34;UBERON:0001869!4.59e-10!32;UBERON:0002791!1.16e-09!33;UBERON:0002780!9.45e-09!41;UBERON:0001890!9.45e-09!41;UBERON:0006240!9.45e-09!41;UBERON:0003080!2.11e-08!42;UBERON:0002619!2.56e-08!22;UBERON:0000200!6.52e-08!6;UBERON:0001049!3.03e-07!57;UBERON:0005068!3.03e-07!57;UBERON:0006241!3.03e-07!57;UBERON:0007135!3.03e-07!57;UBERON:0000955!5.46e-07!69;UBERON:0006238!5.46e-07!69;UBERON:0000956!6.66e-07!25;UBERON:0000203!6.66e-07!25;UBERON:0002616!8.85e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.73e-29;1!UBERON:0005208;2.73e-29;1!UBERON:0004145;2.73e-29;1!UBERON:0005946;2.73e-29;1!UBERON:0005965;2.73e-29;1!UBERON:0002078;2.73e-29;1!UBERON:0002081;2.21e-15;2!UBERON:0002133;2.21e-15;2!UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11!UBERON:0003978;1.04e-10;3!UBERON:0004151;1.04e-10;3!UBERON:0000946;1.04e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.37e-29,1;UBERON:0005208,2.37e-29,1;UBERON:0005946,2.37e-29,1;UBERON:0005965,2.37e-29,1;UBERON:0002078,2.37e-29,1;UBERON:0002081,2.05e-15,2;UBERON:0002133,2.05e-15,2;UBERON:0010227,2.05e-15,2;UBERON:0000473,2.65e-15,8;UBERON:0003135,2.07e-11,11;UBERON:0003978,9.90e-11,3;UBERON:0009751,9.90e-11,3;UBERON:0004151,9.90e-11,3;UBERON:0000946,9.90e-11,3;UBERON:0002523,9.90e-11,3;UBERON:0005983,9.90e-11,3;UBERON:0004145,9.90e-11,3;UBERON:0002165,9.90e-11,3;UBERON:0002062,9.90e-11,3;UBERON:0007280,9.90e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.314843125254717,0.393364276848904,0.383829398097213,0,0,0,0,0.232401601740905,0,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0.56738522469114,0,0.502497330513487,0,0,0,0.368277635987565,0.632924774881769,0,0,0,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.735326160691737,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667396566847634,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0.179515288819544,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0,0,0.404406797884062,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0.330991955875499,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0.253243183823515,0,0.160317640503067,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0.203996435272644,0,0.600420288709789,0,1.27746588066972,0,0.525774708558629,0,0,1.43574604915363,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,0.681017030557878,0,0.137539436597234,0,0.449947783103001,0.77380195455795,0.425246896606173,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0,0,0.327872630709804,0,0.886068179966986,0.610131324509816,0.250381861413,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.385239660814607,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0.138314504928436,0.807378228159255,0,0.0981477185010256,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.317079050969534,0,0,0,0.175871244359621,0,0,0,0,0.455324382702595,0,0.230467975111559,0,0.0679697329768317,0.328863867814245,0.118193840883968,0.111231401892069,0.156986185701028,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0.22910686854405,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.485710993059139,0.233939463462106,0,0,0,0.109940516745429,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.299823467774787,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,5.07717278062204,11.2544934665595,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.314843125254717,0.393364276848904,0.383829398097213,0,0,0,0,0.232401601740905,0,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0.56738522469114,0,0.502497330513487,0,0,0,0.368277635987565,0.632924774881769,0,0,0,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.735326160691737,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667396566847634,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0.179515288819544,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0,0,0.404406797884062,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0.330991955875499,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0.253243183823515,0,0.160317640503067,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0.203996435272644,0,0.600420288709789,0,1.27746588066972,0,0.525774708558629,0,0,1.43574604915363,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,0.681017030557878,0,0.137539436597234,0,0.449947783103001,0.77380195455795,0.425246896606173,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0,0,0.327872630709804,0,0.886068179966986,0.610131324509816,0.250381861413,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.385239660814607,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0.138314504928436,0.807378228159255,0,0.0981477185010256,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.317079050969534,0,0,0,0.175871244359621,0,0,0,0,0.455324382702595,0,0.230467975111559,0,0.0679697329768317,0.328863867814245,0.118193840883968,0.111231401892069,0.156986185701028,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0.22910686854405,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.485710993059139,0.233939463462106,0,0,0,0.109940516745429,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.299823467774787,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,5.07717278062204,11.2544934665595,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@SMG7 | |||
}} | }} |
Latest revision as of 03:15, 19 September 2015
Short description: | p10@SMG7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SMG7_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -324bp_to_ENST00000440812_5end |
EntrezGene: | SMG7 |
HGNC: | 16792 |
UniProt: | E9PEK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.37e-29 | 1 |
right atrium valve | 2.37e-29 | 1 |
outflow tract of atrium | 2.37e-29 | 1 |
outflow part of right atrium | 2.37e-29 | 1 |
right cardiac atrium | 2.37e-29 | 1 |
cardiac atrium | 2.05e-15 | 2 |
atrioventricular valve | 2.05e-15 | 2 |
future cardiac atrium | 2.05e-15 | 2 |
testis | 2.65e-15 | 8 |
male reproductive organ | 2.07e-11 | 11 |
valve | 9.90e-11 | 3 |
cardiac mesenchyme | 9.90e-11 | 3 |
cardiac chamber | 9.90e-11 | 3 |
cardial valve | 9.90e-11 | 3 |
tunica intima | 9.90e-11 | 3 |
heart layer | 9.90e-11 | 3 |
outflow tract | 9.90e-11 | 3 |
endocardium | 9.90e-11 | 3 |
endocardial cushion | 9.90e-11 | 3 |
presumptive endocardium | 9.90e-11 | 3 |