FFCP PHASE1:Hg19::chr4:87770290..87770304,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:87770290..87770304,-
|short_description=p2@SLC10A6
|description=CAGE_peak_2_at_SLC10A6_5end
|association_with_transcript=-13bp_to_ENST00000505535_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=345274 | |EntrezGene=345274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30603 | |HGNC=30603 | ||
|TSSclassifier=strong | |||
|UniProt=D6RHD6 | |UniProt=D6RHD6 | ||
|association_with_transcript=-13bp_to_ENST00000505535_5end | |||
|cluster_id=chr4:87770290..87770304,- | |||
|description=CAGE_peak_2_at_SLC10A6_5end | |||
|id=chr4:87770290..87770304,- | |||
|ontology_enrichment_celltype=CL:0002159!3.67e-14!13;CL:0000622!4.65e-13!5;CL:0000362!7.49e-13!8;CL:0002621!1.39e-12!3;CL:0000154!6.90e-11!6;CL:0001014!2.55e-09!2;CL:0001016!2.55e-09!2;CL:0000317!3.00e-09!2;CL:1000448!3.00e-09!2;CL:0002308!3.00e-09!2;CL:0002140!3.00e-09!2;CL:0000312!4.16e-08!5;CL:0000150!2.96e-07!9;CL:0002076!5.75e-07!43;CL:0000240!8.26e-07!6;CL:0000311!8.26e-07!6;CL:0000079!8.26e-07!6;CL:0000237!8.26e-07!6;CL:0000036!8.26e-07!6;CL:0000357!8.26e-07!6;CL:0000114!8.26e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000362;6.20e-37;9!CL:0001014;1.06e-27;2!CL:0001016;1.06e-27;2!CL:0000317;4.08e-27;2!CL:1000448;4.08e-27;2!CL:0002308;4.08e-27;2!CL:0002140;4.08e-27;2!CL:0000312;6.28e-25;5!CL:0002159;8.55e-24;14!CL:0000240;6.80e-21;6!CL:0000311;6.80e-21;6!CL:0000079;6.80e-21;6!CL:0000237;6.80e-21;6!CL:0002621;1.19e-18;3!CL:0000453;1.09e-11;5!CL:0000622;1.85e-11;5!CL:0000840;6.79e-10;5!CL:0002077;1.03e-09;34!CL:0000154;1.06e-09;6!CL:0000990;7.00e-07;8!CL:0000150;9.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000362,3.69e-37,9;CL:0001014,1.07e-27,2;CL:0001016,1.07e-27,2;CL:0000317,1.83e-27,2;CL:1000448,1.83e-27,2;CL:0002308,1.83e-27,2;CL:0002140,1.83e-27,2;CL:0000312,5.80e-25,5;CL:0002159,6.14e-24,14;CL:0000240,6.37e-21,6;CL:0000311,6.37e-21,6;CL:0000079,6.37e-21,6;CL:0000237,6.37e-21,6;CL:0000036,6.37e-21,6;CL:0000357,6.37e-21,6;CL:0000114,6.37e-21,6;CL:0002621,9.50e-19,3;CL:0000453,1.09e-11,5;CL:0000622,1.35e-11,5;CL:0000840,6.79e-10,5;CL:0001029,6.79e-10,5;CL:0002077,7.36e-10,34;CL:0000154,8.11e-10,6;CL:0000990,7.00e-07,8;CL:0000150,7.87e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;6.80e-21;6!CL:0000114;6.80e-21;6!UBERON:0009143;1.84e-14;1!UBERON:0008814;4.23e-08;2!UBERON:0010056;4.23e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.84e-14;1!DOID:3149;1.84e-14;1!DOID:3451;7.03e-08;2!DOID:4159;7.03e-08;2!DOID:0060122;7.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.15e-14,1;DOID:3149,3.15e-14,1;DOID:3451,9.19e-08,2;DOID:4159,9.19e-08,2;DOID:0060122,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.39e-12!3;UBERON:0007023!4.16e-10!115;UBERON:0001003!5.61e-10!14;UBERON:0007376!5.61e-10!14;UBERON:0007383!5.61e-10!14;UBERON:0002419!3.00e-09!2;UBERON:0007771!3.00e-09!2;UBERON:0003297!3.00e-09!2;UBERON:0001821!3.00e-09!2;UBERON:0003487!3.00e-09!2;UBERON:0001820!3.00e-09!2;UBERON:0005089!3.00e-09!2;UBERON:0005088!3.00e-09!2;UBERON:0000166!2.92e-08!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;4.08e-27;2!UBERON:0007771;4.08e-27;2!UBERON:0003297;4.08e-27;2!UBERON:0001821;4.08e-27;2!UBERON:0003487;4.08e-27;2!UBERON:0001820;4.08e-27;2!UBERON:0001003;3.25e-22;15!UBERON:0007376;3.25e-22;15!UBERON:0010371;4.21e-20;31!UBERON:0001949;1.19e-18;3!UBERON:0002199;7.08e-10;46!UBERON:0002416;7.08e-10;46!UBERON:0002097;9.35e-10;41!UBERON:0003929;1.56e-08;7!UBERON:0003350;1.42e-07;8!UBERON:0001828;1.42e-07;8!UBERON:0003102;6.47e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.83e-27,2;UBERON:0007771,1.83e-27,2;UBERON:0003297,1.83e-27,2;UBERON:0001821,1.83e-27,2;UBERON:0003487,1.83e-27,2;UBERON:0001820,1.83e-27,2;UBERON:0005089,1.83e-27,2;UBERON:0005088,1.83e-27,2;UBERON:0001003,2.39e-22,15;UBERON:0007376,2.39e-22,15;UBERON:0007383,2.39e-22,15;UBERON:0001949,9.50e-19,3;UBERON:0002097,1.99e-11,41;UBERON:0002199,3.76e-10,46;UBERON:0002416,3.76e-10,46;UBERON:0003102,5.76e-10,99;UBERON:0003350,1.31e-07,8;UBERON:0001828,1.31e-07,8 | |||
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| ||
|short_description=p2@SLC10A6 | |||
}} | }} |
Latest revision as of 04:27, 19 September 2015
Short description: | p2@SLC10A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC10A6_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000505535_5end |
EntrezGene: | SLC10A6 |
HGNC: | 30603 |
UniProt: | D6RHD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epidermal cell | 3.69e-37 | 9 |
CD1a-positive Langerhans cell | 1.07e-27 | 2 |
immature CD1a-positive Langerhans cell | 1.07e-27 | 2 |
sebum secreting cell | 1.83e-27 | 2 |
epithelial cell of sweat gland | 1.83e-27 | 2 |
epithelial cell of skin gland | 1.83e-27 | 2 |
acinar cell of sebaceous gland | 1.83e-27 | 2 |
keratinocyte | 5.80e-25 | 5 |
general ecto-epithelial cell | 6.14e-24 | 14 |
stratified squamous epithelial cell | 6.37e-21 | 6 |
keratin accumulating cell | 6.37e-21 | 6 |
stratified epithelial cell | 6.37e-21 | 6 |
keratinizing barrier epithelial cell | 6.37e-21 | 6 |
epithelial fate stem cell | 6.37e-21 | 6 |
stratified epithelial stem cell | 6.37e-21 | 6 |
surface ectodermal cell | 6.37e-21 | 6 |
gingival epithelial cell | 9.50e-19 | 3 |
Langerhans cell | 1.09e-11 | 5 |
acinar cell | 1.35e-11 | 5 |
immature conventional dendritic cell | 6.79e-10 | 5 |
common dendritic progenitor | 6.79e-10 | 5 |
ecto-epithelial cell | 7.36e-10 | 34 |
protein secreting cell | 8.11e-10 | 6 |
conventional dendritic cell | 7.00e-07 | 8 |
glandular epithelial cell | 7.87e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.83e-27 | 2 |
epidermis gland | 1.83e-27 | 2 |
gland of integumental system | 1.83e-27 | 2 |
sebaceous gland | 1.83e-27 | 2 |
skin sebaceous gland | 1.83e-27 | 2 |
sweat gland | 1.83e-27 | 2 |
sweat gland placode | 1.83e-27 | 2 |
sebaceous gland placode | 1.83e-27 | 2 |
skin epidermis | 2.39e-22 | 15 |
outer epithelium | 2.39e-22 | 15 |
enveloping layer of ectoderm | 2.39e-22 | 15 |
gingival epithelium | 9.50e-19 | 3 |
skin of body | 1.99e-11 | 41 |
integument | 3.76e-10 | 46 |
integumental system | 3.76e-10 | 46 |
surface structure | 5.76e-10 | 99 |
epithelium of mucosa | 1.31e-07 | 8 |
gingiva | 1.31e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.15e-14 | 1 |
keratoacanthoma | 3.15e-14 | 1 |
skin carcinoma | 9.19e-08 | 2 |
skin cancer | 9.19e-08 | 2 |
integumentary system cancer | 9.19e-08 | 2 |