FFCP PHASE1:Hg19::chr5:93447333..93447386,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83989 | |EntrezGene=83989 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25365 | |HGNC=25365 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WUF8,B4DJ14,B4DLG5 | |UniProt=Q8WUF8,B4DJ14,B4DLG5 | ||
|association_with_transcript=0bp_to_ENST00000395965,ENST00000505869,ENST00000509163_5end | |association_with_transcript=0bp_to_ENST00000395965,ENST00000505869,ENST00000509163_5end | ||
|cluster_id=chr5:93447333..93447386,- | |||
|coexpression_cluster_id=C1826 | |coexpression_cluster_id=C1826 | ||
|description=CAGE_peak_1_at_FAM172A_5end | |description=CAGE_peak_1_at_FAM172A_5end | ||
|id=chr5:93447333..93447386,- | |id=chr5:93447333..93447386,- | ||
|ontology_enrichment_celltype=CL:0000738!3.98e-20!140;CL:0000037!1.62e-14!172;CL:0000566!1.62e-14!172;CL:0002031!4.81e-14!124;CL:0002087!1.38e-13!119;CL:0002032!1.30e-12!165;CL:0000837!1.30e-12!165;CL:0000988!2.44e-12!182;CL:0000791!2.48e-10!18;CL:0000789!2.48e-10!18;CL:0002420!2.48e-10!18;CL:0002419!2.48e-10!18;CL:0000790!2.48e-10!18;CL:0000838!1.69e-09!52;CL:0000542!2.36e-09!53;CL:0000051!2.36e-09!53;CL:0000766!2.41e-08!76;CL:0000625!1.78e-07!11;CL:0000084!2.25e-07!25;CL:0000827!2.25e-07!25 | |ontology_enrichment_celltype=CL:0000738!3.98e-20!140;CL:0000037!1.62e-14!172;CL:0000566!1.62e-14!172;CL:0002031!4.81e-14!124;CL:0002087!1.38e-13!119;CL:0002032!1.30e-12!165;CL:0000837!1.30e-12!165;CL:0000988!2.44e-12!182;CL:0000791!2.48e-10!18;CL:0000789!2.48e-10!18;CL:0002420!2.48e-10!18;CL:0002419!2.48e-10!18;CL:0000790!2.48e-10!18;CL:0000838!1.69e-09!52;CL:0000542!2.36e-09!53;CL:0000051!2.36e-09!53;CL:0000766!2.41e-08!76;CL:0000625!1.78e-07!11;CL:0000084!2.25e-07!25;CL:0000827!2.25e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.53e-10;18!CL:0000789;2.53e-10;18!CL:0002419;2.53e-10;18!CL:0000625;1.81e-07;11!CL:0000084;2.19e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.60e-22,136;CL:0000037,7.77e-16,168;CL:0002031,1.28e-15,120;CL:0002087,3.61e-15,115;CL:0002032,7.56e-14,161;CL:0000837,7.56e-14,161;CL:0000988,8.79e-14,177;CL:0000791,2.48e-10,18;CL:0000789,2.48e-10,18;CL:0002420,2.48e-10,18;CL:0002419,2.48e-10,18;CL:0000790,2.48e-10,18;CL:0000766,7.50e-10,72;CL:0000838,1.69e-09,52;CL:0000542,2.36e-09,53;CL:0000051,2.36e-09,53;CL:0000557,7.51e-08,67;CL:0000625,1.78e-07,11;CL:0000084,2.25e-07,25;CL:0000827,2.25e-07,25;CL:0000839,9.84e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000790;2.53e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.84e-31!115;UBERON:0001049!5.17e-19!57;UBERON:0005068!5.17e-19!57;UBERON:0006241!5.17e-19!57;UBERON:0007135!5.17e-19!57;UBERON:0003080!1.35e-16!42;UBERON:0002616!1.49e-16!59;UBERON:0002780!2.66e-16!41;UBERON:0001890!2.66e-16!41;UBERON:0006240!2.66e-16!41;UBERON:0001017!9.53e-16!82;UBERON:0000955!1.15e-15!69;UBERON:0006238!1.15e-15!69;UBERON:0005743!1.92e-14!86;UBERON:0000073!7.12e-14!94;UBERON:0001016!7.12e-14!94;UBERON:0002020!3.08e-13!34;UBERON:0003528!3.08e-13!34;UBERON:0001893!4.45e-13!34;UBERON:0002791!8.28e-13!33;UBERON:0001869!2.53e-12!32;UBERON:0002346!8.29e-11!90;UBERON:0003075!3.49e-10!86;UBERON:0007284!3.49e-10!86;UBERON:0002619!5.54e-10!22;UBERON:0000956!1.08e-09!25;UBERON:0000203!1.08e-09!25;UBERON:0001950!3.03e-09!20;UBERON:0002390!5.23e-09!102;UBERON:0003061!5.23e-09!102;UBERON:0002193!1.09e-08!112;UBERON:0003056!2.74e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!5.84e-31!115;UBERON:0001049!5.17e-19!57;UBERON:0005068!5.17e-19!57;UBERON:0006241!5.17e-19!57;UBERON:0007135!5.17e-19!57;UBERON:0003080!1.35e-16!42;UBERON:0002616!1.49e-16!59;UBERON:0002780!2.66e-16!41;UBERON:0001890!2.66e-16!41;UBERON:0006240!2.66e-16!41;UBERON:0001017!9.53e-16!82;UBERON:0000955!1.15e-15!69;UBERON:0006238!1.15e-15!69;UBERON:0005743!1.92e-14!86;UBERON:0000073!7.12e-14!94;UBERON:0001016!7.12e-14!94;UBERON:0002020!3.08e-13!34;UBERON:0003528!3.08e-13!34;UBERON:0001893!4.45e-13!34;UBERON:0002791!8.28e-13!33;UBERON:0001869!2.53e-12!32;UBERON:0002346!8.29e-11!90;UBERON:0003075!3.49e-10!86;UBERON:0007284!3.49e-10!86;UBERON:0002619!5.54e-10!22;UBERON:0000956!1.08e-09!25;UBERON:0000203!1.08e-09!25;UBERON:0001950!3.03e-09!20;UBERON:0002390!5.23e-09!102;UBERON:0003061!5.23e-09!102;UBERON:0002193!1.09e-08!112;UBERON:0003056!2.74e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.47e-12;41!UBERON:0001890;4.47e-12;41!UBERON:0002791;2.23e-11;32!UBERON:0003528;2.30e-11;34!UBERON:0002020;2.30e-11;34!UBERON:0001869;2.95e-11;32!UBERON:0001893;3.51e-11;34!UBERON:0000073;2.08e-10;53!UBERON:0002616;2.08e-10;53!UBERON:0002619;5.42e-10;22!UBERON:0000956;1.11e-09;25!UBERON:0000203;1.11e-09;25!UBERON:0007023;2.73e-09;114!UBERON:0001950;3.01e-09;20!UBERON:0001017;7.97e-08;75!UBERON:0001016;1.93e-07;83!UBERON:0000955;2.62e-07;68 | |||
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| ||
|short_description=p1@FAM172A | |short_description=p1@FAM172A | ||
}} | }} |
Latest revision as of 06:36, 19 September 2015
Short description: | p1@FAM172A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM172A_5end |
Coexpression cluster: | C1826_Neutrophils_parietal_lung_occipital_cerebellum_temporal_CD4 |
Association with transcript: | 0bp_to_ENST00000395965, ENST00000505869, ENST00000509163_5end |
EntrezGene: | FAM172A |
HGNC: | 25365 |
UniProt: | Q8WUF8B4DJ14B4DLG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.60e-22 | 136 |
hematopoietic stem cell | 7.77e-16 | 168 |
hematopoietic lineage restricted progenitor cell | 1.28e-15 | 120 |
nongranular leukocyte | 3.61e-15 | 115 |
hematopoietic oligopotent progenitor cell | 7.56e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.56e-14 | 161 |
hematopoietic cell | 8.79e-14 | 177 |
mature alpha-beta T cell | 2.48e-10 | 18 |
alpha-beta T cell | 2.48e-10 | 18 |
immature T cell | 2.48e-10 | 18 |
mature T cell | 2.48e-10 | 18 |
immature alpha-beta T cell | 2.48e-10 | 18 |
myeloid leukocyte | 7.50e-10 | 72 |
lymphoid lineage restricted progenitor cell | 1.69e-09 | 52 |
lymphocyte | 2.36e-09 | 53 |
common lymphoid progenitor | 2.36e-09 | 53 |
granulocyte monocyte progenitor cell | 7.51e-08 | 67 |
CD8-positive, alpha-beta T cell | 1.78e-07 | 11 |
T cell | 2.25e-07 | 25 |
pro-T cell | 2.25e-07 | 25 |
myeloid lineage restricted progenitor cell | 9.84e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.76e-30 | 114 |
neural tube | 1.04e-18 | 56 |
neural rod | 1.04e-18 | 56 |
future spinal cord | 1.04e-18 | 56 |
neural keel | 1.04e-18 | 56 |
regional part of nervous system | 3.91e-17 | 53 |
regional part of brain | 3.91e-17 | 53 |
regional part of forebrain | 2.66e-16 | 41 |
forebrain | 2.66e-16 | 41 |
anterior neural tube | 2.66e-16 | 41 |
future forebrain | 2.66e-16 | 41 |
central nervous system | 1.87e-15 | 81 |
brain | 2.28e-15 | 68 |
future brain | 2.28e-15 | 68 |
nervous system | 9.25e-15 | 89 |
brain grey matter | 3.08e-13 | 34 |
gray matter | 3.08e-13 | 34 |
telencephalon | 4.45e-13 | 34 |
regional part of telencephalon | 1.76e-12 | 32 |
cerebral hemisphere | 2.53e-12 | 32 |
neurectoderm | 1.14e-10 | 86 |
hematopoietic system | 2.53e-10 | 98 |
blood island | 2.53e-10 | 98 |
neural plate | 4.79e-10 | 82 |
presumptive neural plate | 4.79e-10 | 82 |
regional part of cerebral cortex | 5.54e-10 | 22 |
hemolymphoid system | 6.67e-10 | 108 |
cerebral cortex | 1.08e-09 | 25 |
pallium | 1.08e-09 | 25 |
neocortex | 3.03e-09 | 20 |
pre-chordal neural plate | 1.83e-07 | 61 |
immune system | 2.74e-07 | 93 |