FFCP PHASE1:Hg19::chr8:93978333..93978345,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286144 | |EntrezGene=286144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27828 | |HGNC=27828 | ||
|TSSclassifier=strong | |||
|UniProt=E5RG44 | |UniProt=E5RG44 | ||
|association_with_transcript=0bp_to_ENST00000519792,ENST00000520430,ENST00000521617,ENST00000524037,uc003yfk.3,uc003yfl.3,uc003yfm.3,uc003yfn.3,uc003yfo.3,uc003yfq.3,uc010map.2_5end | |association_with_transcript=0bp_to_ENST00000519792,ENST00000520430,ENST00000521617,ENST00000524037,uc003yfk.3,uc003yfl.3,uc003yfm.3,uc003yfn.3,uc003yfo.3,uc003yfq.3,uc010map.2_5end | ||
|cluster_id=chr8:93978333..93978345,- | |||
|coexpression_cluster_id=C4780 | |||
|description=CAGE_peak_4_at_C8orf83_5end | |description=CAGE_peak_4_at_C8orf83_5end | ||
|id=chr8:93978333..93978345,- | |id=chr8:93978333..93978345,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!3.98e-12!59;UBERON:0001049!4.79e-12!57;UBERON:0005068!4.79e-12!57;UBERON:0006241!4.79e-12!57;UBERON:0007135!4.79e-12!57;UBERON:0003080!5.46e-12!42;UBERON:0002780!9.95e-12!41;UBERON:0001890!9.95e-12!41;UBERON:0006240!9.95e-12!41;UBERON:0001017!2.21e-11!82;UBERON:0005743!3.49e-11!86;UBERON:0000955!5.76e-11!69;UBERON:0006238!5.76e-11!69;UBERON:0000073!1.12e-10!94;UBERON:0001016!1.12e-10!94;UBERON:0000468!1.68e-10!659;UBERON:0000062!2.79e-10!511;UBERON:0002020!3.62e-09!34;UBERON:0003528!3.62e-09!34;UBERON:0001893!4.69e-09!34;UBERON:0001869!5.39e-09!32;UBERON:0000924!5.55e-09!173;UBERON:0006601!5.55e-09!173;UBERON:0004121!6.09e-09!169;UBERON:0002791!1.03e-08!33;UBERON:0000033!1.03e-08!123;UBERON:0000467!3.26e-08!625;UBERON:0000480!4.53e-08!626;UBERON:0003075!6.49e-08!86;UBERON:0007284!6.49e-08!86;UBERON:0002346!7.19e-08!90;UBERON:0003056!8.66e-08!61;UBERON:0000153!9.74e-08!129;UBERON:0007811!9.74e-08!129;UBERON:0000475!1.01e-07!365;UBERON:0007023!2.16e-07!115;UBERON:0002619!4.00e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.21e-09;41!UBERON:0001890;2.21e-09;41!UBERON:0002791;7.24e-09;32!UBERON:0001869;1.19e-08;32!UBERON:0003528;1.36e-08;34!UBERON:0002020;1.36e-08;34!UBERON:0001893;3.47e-08;34!UBERON:0000073;4.71e-08;53!UBERON:0002616;4.71e-08;53!UBERON:0002619;2.93e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.31e-11,56;UBERON:0005068,1.31e-11,56;UBERON:0006241,1.31e-11,56;UBERON:0007135,1.31e-11,56;UBERON:0002780,1.32e-11,41;UBERON:0001890,1.32e-11,41;UBERON:0003080,1.32e-11,41;UBERON:0006240,1.32e-11,41;UBERON:0000073,3.15e-11,53;UBERON:0002616,3.15e-11,53;UBERON:0000955,8.52e-11,68;UBERON:0006238,8.52e-11,68;UBERON:0001017,8.57e-11,81;UBERON:0001016,2.38e-10,89;UBERON:0003528,5.62e-09,34;UBERON:0002020,5.62e-09,34;UBERON:0002791,7.03e-09,32;UBERON:0001893,7.30e-09,34;UBERON:0001869,8.67e-09,32;UBERON:0004121,3.73e-08,171;UBERON:0000924,3.73e-08,171;UBERON:0006601,3.73e-08,171;UBERON:0010371,1.81e-07,104;UBERON:0002619,6.37e-07,22;UBERON:0007023,7.15e-07,114 | |||
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| ||
|short_description=p4@C8orf83 | |short_description=p4@C8orf83 | ||
}} | }} |
Latest revision as of 12:09, 19 September 2015
Short description: | p4@C8orf83 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C8orf83_5end |
Coexpression cluster: | C4780_lung_mesothelioma_Neutrophils_pituitary_liver_Adipocyte_merkel |
Association with transcript: | 0bp_to_ENST00000519792, ENST00000520430, ENST00000521617, ENST00000524037, uc003yfk.3, uc003yfl.3, uc003yfm.3, uc003yfn.3, uc003yfo.3, uc003yfq.3, uc010map.2_5end |
EntrezGene: | C8orf83 |
HGNC: | 27828 |
UniProt: | E5RG44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.31e-11 | 56 |
neural rod | 1.31e-11 | 56 |
future spinal cord | 1.31e-11 | 56 |
neural keel | 1.31e-11 | 56 |
regional part of forebrain | 1.32e-11 | 41 |
forebrain | 1.32e-11 | 41 |
anterior neural tube | 1.32e-11 | 41 |
future forebrain | 1.32e-11 | 41 |
regional part of nervous system | 3.15e-11 | 53 |
regional part of brain | 3.15e-11 | 53 |
brain | 8.52e-11 | 68 |
future brain | 8.52e-11 | 68 |
central nervous system | 8.57e-11 | 81 |
nervous system | 2.38e-10 | 89 |
brain grey matter | 5.62e-09 | 34 |
gray matter | 5.62e-09 | 34 |
regional part of telencephalon | 7.03e-09 | 32 |
telencephalon | 7.30e-09 | 34 |
cerebral hemisphere | 8.67e-09 | 32 |
ectoderm-derived structure | 3.73e-08 | 171 |
ectoderm | 3.73e-08 | 171 |
presumptive ectoderm | 3.73e-08 | 171 |
ecto-epithelium | 1.81e-07 | 104 |
regional part of cerebral cortex | 6.37e-07 | 22 |
adult organism | 7.15e-07 | 114 |