FFCP PHASE1:Hg19::chr8:93978333..93978345,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27828 | |||
|TSSclassifier=strong | |||
|UniProt=E5RG44 | |||
|association_with_transcript=0bp_to_ENST00000519792,ENST00000520430,ENST00000521617,ENST00000524037,uc003yfk.3,uc003yfl.3,uc003yfm.3,uc003yfn.3,uc003yfo.3,uc003yfq.3,uc010map.2_5end | |||
|cluster_id=chr8:93978333..93978345,- | |||
|coexpression_cluster_id=C4780 | |||
|description=CAGE_peak_4_at_C8orf83_5end | |||
|id=chr8:93978333..93978345,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!3.98e-12!59;UBERON:0001049!4.79e-12!57;UBERON:0005068!4.79e-12!57;UBERON:0006241!4.79e-12!57;UBERON:0007135!4.79e-12!57;UBERON:0003080!5.46e-12!42;UBERON:0002780!9.95e-12!41;UBERON:0001890!9.95e-12!41;UBERON:0006240!9.95e-12!41;UBERON:0001017!2.21e-11!82;UBERON:0005743!3.49e-11!86;UBERON:0000955!5.76e-11!69;UBERON:0006238!5.76e-11!69;UBERON:0000073!1.12e-10!94;UBERON:0001016!1.12e-10!94;UBERON:0000468!1.68e-10!659;UBERON:0000062!2.79e-10!511;UBERON:0002020!3.62e-09!34;UBERON:0003528!3.62e-09!34;UBERON:0001893!4.69e-09!34;UBERON:0001869!5.39e-09!32;UBERON:0000924!5.55e-09!173;UBERON:0006601!5.55e-09!173;UBERON:0004121!6.09e-09!169;UBERON:0002791!1.03e-08!33;UBERON:0000033!1.03e-08!123;UBERON:0000467!3.26e-08!625;UBERON:0000480!4.53e-08!626;UBERON:0003075!6.49e-08!86;UBERON:0007284!6.49e-08!86;UBERON:0002346!7.19e-08!90;UBERON:0003056!8.66e-08!61;UBERON:0000153!9.74e-08!129;UBERON:0007811!9.74e-08!129;UBERON:0000475!1.01e-07!365;UBERON:0007023!2.16e-07!115;UBERON:0002619!4.00e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.21e-09;41!UBERON:0001890;2.21e-09;41!UBERON:0002791;7.24e-09;32!UBERON:0001869;1.19e-08;32!UBERON:0003528;1.36e-08;34!UBERON:0002020;1.36e-08;34!UBERON:0001893;3.47e-08;34!UBERON:0000073;4.71e-08;53!UBERON:0002616;4.71e-08;53!UBERON:0002619;2.93e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.31e-11,56;UBERON:0005068,1.31e-11,56;UBERON:0006241,1.31e-11,56;UBERON:0007135,1.31e-11,56;UBERON:0002780,1.32e-11,41;UBERON:0001890,1.32e-11,41;UBERON:0003080,1.32e-11,41;UBERON:0006240,1.32e-11,41;UBERON:0000073,3.15e-11,53;UBERON:0002616,3.15e-11,53;UBERON:0000955,8.52e-11,68;UBERON:0006238,8.52e-11,68;UBERON:0001017,8.57e-11,81;UBERON:0001016,2.38e-10,89;UBERON:0003528,5.62e-09,34;UBERON:0002020,5.62e-09,34;UBERON:0002791,7.03e-09,32;UBERON:0001893,7.30e-09,34;UBERON:0001869,8.67e-09,32;UBERON:0004121,3.73e-08,171;UBERON:0000924,3.73e-08,171;UBERON:0006601,3.73e-08,171;UBERON:0010371,1.81e-07,104;UBERON:0002619,6.37e-07,22;UBERON:0007023,7.15e-07,114 | |||
|phase1_expression=5.08699461957559,1.71280419112787,6.3429481843187,4.00293193412522,4.02264984984559,2.61701557230111,2.53299878168311,1.89515962028049,1.30592814099919,1.47440361900905,0,1.09220686065086,1.05506791291381,1.73272894144065,0.994192127183747,2.6893005858071,3.61616716814386,2.19093027116212,1.46379839637152,0.61560529038394,0.204000691244253,0,2.28988789704845,0.547497700291537,1.12988375635323,0.61130724598361,0.492603536699674,0.393553906568396,0.393364276848904,0.383829398097213,0.928896739896456,1.83884244895785,0.30120591877825,0.369754010166788,0,0,1.76160263600908,1.10799081706375,0.200544447470142,0.217010870715852,2.68698569087909,1.6194683300949,2.83333124397605,3.19876125315042,1.13362783106643,0.485168122375632,1.16214518452842,1.23350366406548,0.619412741790207,3.16461631554365,1.2808035326455,1.41889337933151,2.41321976515633,0,0,3.38836211176688,1.36453075028923,1.12361742222542,2.14258724659632,1.28371610830437,1.27867425159808,2.96866170168044,0.997318288108159,0.852449501065388,4.35313857942876,3.97169657283798,2.4912889959823,2.26123798731069,1.0429658368404,0.868755378820466,4.84319602106695,2.94622108790052,2.21523671208619,2.5350634357433,2.55125159958052,2.51590374610051,2.92054440980887,2.85336096398862,3.53596290733576,2.56511469367124,3.58050018958362,3.65328307529268,1.75996244461323,2.73069305631066,0,2.13365111283254,0.800791974072025,0,0.661044872784862,0,0,0,0,1.32171328579026,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0.950452044448374,0.451725357233318,0.383959833463255,1.24930726552346,0,0,0,0,0.144824403882799,2.43806866313962,0,2.42938867502708,1.80719576192283,1.50401373190767,1.44846518960824,2.3858578411533,2.43317435151318,1.41802225746102,0.221729397462564,0.966182642624386,0.916853528483988,0.364295288292542,0,1.62273696827342,1.21890816109487,0.531831842075461,1.19245312152671,0,0.371457501329565,0.39752481473341,0,0,0.56530794192401,1.25849830862972,0,0.208994966536811,2.32575083252396,2.84613010149368,4.35136796594071,0.805658634218294,0,0,0,0.81014194788176,1.25019619597712,0.673588117878509,0.450445921933289,0,0,0.183201743930407,0,3.87780264148325,0.436094052142534,2.98183171017191,1.64619665163954,1.45650098894541,0.286836620748814,1.06400514659507,1.68203280042692,0,1.97334038733728,3.11211035399766,0.67355336034844,2.12500474047496,1.66493170409425,1.72852777344,0,1.24864030732128,0.570471821544449,0.149448680551801,2.81842796745036,2.10434827678571,1.82586048712923,2.85815839756851,1.47401180774122,1.85986406116378,3.56400857184616,2.22540236350701,1.82032272387605,0.718618141816238,1.85169725349473,1.00094815897571,2.21651292387346,0.438977620880838,2.14541457059314,1.05166641234618,2.1552114800404,2.15267562826634,4.05759038755278,3.17897851739343,1.20036438433761,2.37020817248409,2.57640540045629,0.930584281657949,1.0126579934476,2.82567314967476,1.51460264546469,3.31379635112278,4.36444353410792,1.42003837006646,2.31729825923573,1.3564847384839,2.12586938479627,2.72746120590835,3.72845974005705,0.731842236777572,1.19276791489337,1.51052125730374,1.45125477021519,0.252320850875628,1.09493207722749,0,1.92972281457866,0,4.17931135228781,2.16563844500876,0.946454400318751,0.505754070234305,0.482022059766964,0.992645754591546,0.435758888184812,0,0.674156540800822,1.17732879075208,0.769494313892781,0.738155454624648,1.40241773803446,1.2347220339942,0,5.07020139287323,2.94848165003288,0.590789906681404,2.6487785964879,1.10689594688802,1.88724591328378,2.41450627898976,0,1.00528972411631,3.24059558054854,0.651616610620649,0,1.44331342025273,2.20267769452646,3.28744343860301,0.866198686566443,0,1.52203321787679,7.11183958163348,3.43394464837949,3.93947209739836,1.40402559083543,1.18904929830983,2.81201501960331,2.85569617938061,4.11147782002921,3.76145795351963,1.74380363108377,0,2.95597942737566,0.968532774145487,1.03664057770386,1.00883967391873,1.38866676769018,3.17489471460845,0.381988425558278,1.17217447210047,1.71072446022705,2.46785982487976,4.50514586765876,4.57322292208925,0.560655421726804,0.87192013766656,1.466765716419,4.00742318849111,0,0,2.6593811658487,1.04007436911366,0.514414748524284,0,0.266422179016099,3.71742783511184,1.08524321078289,0.823240336780769,0.977208552881205,3.55391948742546,0.791951872933429,6.93310567237048,4.35766729300147,5.29856853264902,2.43247561282381,0.502257091432126,0,1.91699884393266,2.29723871668228,2.85273810081437,0.868687840005475,1.02738161275192,2.14873155887875,0,0,0,0,2.54094624222463,1.30139853857622,0.773288812777695,2.51274398001523,3.82763250991898,5.24304916763028,0,10.3603878359009,3.55805325985506,0.500170521059677,1.62759014219841,1.03985430765404,1.42743191037729,2.05013139544115,2.92853537481783,1.80567659836631,0,1.03473071292505,3.32112799267718,0.553107505625109,1.73767228936166,0.783204629850962,1.37257369524342,1.03384013061444,0.431428401637234,0.320182673410333,0.303127571446259,4.99306318531491,0.604780586659361,4.71404834855676,2.30192959932094,1.12264037773229,6.91951405980785,5.62877973973374,2.89537058058494,0,0.771048469013278,1.06537035187876,1.72467027628999,0.519254429183621,1.16210378459959,0.241718899183244,2.00506470303285,2.3941057123333,1.14814448164607,0.546273504020151,1.96686622439136,0.902399225814824,2.31046011313244,0,0,2.95544560900052,0,0.340187410553031,1.0795795805107,1.54227252690289,0,0,1.27438136522519,0.831076008928724,0.223874754722178,0.877039506583738,1.3071772551245,2.82095137628028,0.656029291399411,3.25378394664303,4.6368455241475,1.19040304263846,2.31026599777646,2.29706215198469,0,4.82051789532479,0.386682873168488,1.54048617114644,0.921022048356777,2.34322173223702,3.22260734604821,1.16013355131383,1.19317278382541,1.4245125703478,3.30569830721956,1.72971060628596,2.16941611240793,2.2254711788221,2.32422774648643,1.5740617341532,0,0.616067160352178,0,0,1.11194531462352,2.71937284809783,3.34942532423701,3.79655309662471,2.2875623270859,0.255897791311334,2.99557291623744,0.636406495851874,0,2.51821440616641,2.47083326762449,1.7671860351853,0.404364963146632,0,0.842516912477962,0,1.94970791705028,0,2.18399858252777,1.69686518344455,1.13008116620243,0.551365343546124,1.32687795048244,0.876901770507525,1.15755106853338,2.62357900818653,1.01455188481352,0,0,2.29458163526482,3.34046739444612,1.07001315444375,2.48332744849418,1.05553817648832,3.29294892959902,0.75894634753143,0.349934720244983,1.53955380360819,0,0,4.5189024372854,1.72202149068492,0,0,3.90529780351831,2.53723804616085,5.35246044999663,0.569647187174163,1.19115887728894,3.29089818468955,3.24236655596359,4.32025149790492,2.37937552888281,1.1750647824022,0.962479855263359,1.22520107990516,1.30062222588003,0,1.20941133692304,1.11598390910176,0,1.34053759092657,1.48171507906718,0.649243880549111,2.80797178113459,0.228234679033192,0.94007937463814,2.50634477090067,0,0.802940375518498,1.61439765752838,1.27753871307098,6.52660155035953,1.22896305723383,1.78940886313933,2.0021897005429,0,1.67043704337145,0,1.89318974933188,1.6653598399891,0,3.36852972734796,2.63714722689409,1.33496573924465,0.557216921387392,1.98895302764489,3.81991175580304,7.42411702081597,4.91457123358771,6.95903353436409,3.09472716103128,3.11664374064136,1.15362711958732,0.211125408127993,1.39473591775749,1.10513566212459,6.2983186963569,1.43176155503017,1.47701766553283,3.42143546427988,0.539210106883961,1.61119057208048,2.04628948090749,1.28236427328014,0,1.11136990144637,0,3.06134723934109,0,3.64598865519327,2.36141999989728,2.89999830173917,3.30001000027949,4.57656570526979,0.709163045303809,2.41320361269025,3.79085997398231,1.73624994933292,4.42870692906919,4.82385754501632,3.05163472634166,5.52896299656123,2.06883333267483,1.97446857438575,1.63407695278485,1.11538995422883,1.84680620409113,3.98797195464504,0,2.33369875465408,1.4124158349861,2.23300811812344,2.28993983504656,3.73124343213044,2.04386596391473,1.2558420511602,0.498635045700469,0.902382642468723,0.19606253431774,0,0,0.158936578980379,2.53197677433632,2.12202650606892,0,1.73110911793673,1.99052386215701,2.21143911258348,0,2.07564790076435,1.60633120630454,1.35748534357092,1.14581926067151,3.21031058919516,3.04543779442941,0,1.56531695145672,0,3.94584402849391,2.41981432097328,5.50930970934882,0.758238955541855,0.450970258243478,0.72581733978073,0,1.65495977937749,0.941798755221676,0,0.569219092059585,1.38674673013139,1.04135843001079,0.881931576729399,2.69883540399248,2.97035336011451,1.71986032471617,1.9351266257817,2.99666200053361,1.06750094169172,1.74580229679155,1.1473296469895,3.84167259326905,1.09633539717401,0.397429223405979,3.48209377757333,1.56441106187842,3.52698809106748,3.20179492109029,2.19790570540343,1.00863292007874,0.572682980829578,1.54435498075768,0.288109595976299,1.61528296235062,0.471388069233591,0.951329442515298,1.255234155748,1.52997326454483,6.0679623879319,3.60252173225874,3.28572909340783,0,5.15718529703949,0,1.39641200636127,0.687481272035051,0,0.199679000498991,0.429226048136571,0.446342914883745,2.01550417460179,2.88239906833923,1.16495949527454,1.3393140992228,2.30764403467266,2.42652757875066,0.590564889088493,0.592713324460491,3.18091875923721,3.81369537112412,0.482259445395058,2.61324929534744,3.32352270423348,0,0.77380195455795,2.12623448303086,1.0063040627978,2.20655980437755,1.57363764404994,2.85120908602398,0.179287339332845,4.03021914370835,0,0.662091970365432,0.76280561296425,2.71499800876856,0.864221491201268,1.95952416065645,3.59190574687462,0.492555124496034,2.3854323049959,2.03961764736226,6.15519381447946,1.32506888912221,1.29282956361551,3.57028024705263,3.25064991980226,2.81926008926669,1.9221734262185,8.01741956008296,4.14239055347196,1.48849806543585,0.592834895693833,0,0,1.08803560673895,0.5013797880454,0.612691153526923,2.95085367638824,2.51286554000375,8.86068179966986,5.61320818549031,4.256491644021,1.14681839138014,3.32787154610557,2.79433813236226,2.07522952404346,2.24964734331792,1.97143852804142,2.28372266835974,1.88212655758537,11.708372645172,3.4781046866598,1.79105763464249,2.33713309847224,2.77402930751307,2.84104507912634,1.76097531226803,2.66943366478961,2.51724075236616,1.81477108515887,4.19680441573507,2.06997209985487,2.23015474029183,1.79921244865442,1.86315548251511,2.90294345488599,2.65841714557995,2.08698024724694,6.01030435988874,2.66563648518157,2.03435366602331,2.72772988803839,4.94088562395447,1.39210127963548,2.3885753321917,2.00013882331577,3.43395705182793,1.34699795506368,2.52369796457302,4.04501643855337,12.0087291169958,1.30497145982606,0.906823702049089,0.463044948647668,2.93684045407761,2.14906609297785,0.926404341482917,6.1399533882038,1.59020231351293,1.54331230616732,2.36519416914302,0.76872455576384,1.38172136692479,0.911579868532147,3.04168559533808,0,0.265729680626726,0.981392365535065,2.94848863961771,1.72041036127604,0,0.79994958341972,2.66729324235352,1.72214979660816,2.83757976783418,1.28874165176289,1.258915569475,1.86623178009892,2.42999305476938,2.47997066212368,0.471797825567689,1.74735421107222,1.52759276958623,1.91317428091515,0.371807292777007,1.67593475391973,1.59002175326709,0,2.40171224485641,2.1160556621441,3.3687002508852,3.14723202972652,9.91876034279095,2.71377560397157,1.8460472781668,6.80593579798639,0.760729777106397,1.93770774758221,0,2.45369296252564,1.65157612686837,0.550285795565037,0.693153996902029,3.4324388592045,4.8325194824207,0.795664888465099,1.95546853708069,2.42046082444224,0,0.523813388962845,2.45657876265145,2.21784129325568,3.30934164630134,3.12431239445539,4.75379631952723,2.60004821795018,8.20462213527329,3.28954660114309,1.98484471355718,4.74852359770976,1.02209942111676,1.60710550763486,5.04425583328236,6.67662164660295,6.82986574053893,1.77404740325278,0.576169937778896,1.02892805662451,5.09772997326238,1.05236437700559,2.36387681767936,7.67496673055277,4.16013392107724,5.97039241680807,1.68163297988273,0.913158720509496,3.67076905071656,3.8220135030964,0.78624198594322,2.84424501118908,1.74362138052188,1.04314963381548,1.60342272946051,2.27937780579341,1.53646629384555,0.691259661814092,1.29068207646083,2.12997601315018,2.8120423570522,1.69354820076372,2.97838929107265,0.62041277132864,3.82215575590973,1.78968690876468,0.392600934460972,3.04794812455674,0,0.513314034281235,1.1598144313382,5.34282092365053,4.67878926924211,3.97901550322736,0.951360726220549,2.48481380485712,1.75904826792687,5.1327366812669,1.54348316215889,3.27839340755936,1.88126918544609,0.980593287015622,1.64973582971138,5.69294554633341,5.34683520588755,0.8453114551668,1.86919826156599,2.16163011353663,1.03132620757723,0,0.71421575442263,0.705789743431384,4.25279243452592,0.730336388246517,1.83491713361816,4.01350832824064,0.631086248772738,0.883889372481891,1.74540276136151,3.1741610430924,2.60396512716726,2.31087814315709,1.73050624849516,1.38783067318587,1.52971800749174,2.53397002022874,3.56960904096936,2.13773924212448,2.20547758883628,0.250707539292375,1.59135266258303,0.267964130156178,4.97501663675268,4.2407528303377,1.49263787330687,1.90451545170992,0.904244737704086,1.30356900021302,1.90624166387043,4.32800676291521,1.0105859447911,0.435433495793923,2.73786640868225,0.404112318087525,2.07994395638761,2.99394320891412,1.62806537221949,2.66818364694289,13.5150597600858,1.52702843581198,0,2.5670703278402,3.25516942652591,5.3260541934841,1.20764276154616,0 | |||
|short_description=p4@C8orf83 | |||
}} |
Latest revision as of 12:09, 19 September 2015
Short description: | p4@C8orf83 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C8orf83_5end |
Coexpression cluster: | C4780_lung_mesothelioma_Neutrophils_pituitary_liver_Adipocyte_merkel |
Association with transcript: | 0bp_to_ENST00000519792, ENST00000520430, ENST00000521617, ENST00000524037, uc003yfk.3, uc003yfl.3, uc003yfm.3, uc003yfn.3, uc003yfo.3, uc003yfq.3, uc010map.2_5end |
EntrezGene: | C8orf83 |
HGNC: | 27828 |
UniProt: | E5RG44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.31e-11 | 56 |
neural rod | 1.31e-11 | 56 |
future spinal cord | 1.31e-11 | 56 |
neural keel | 1.31e-11 | 56 |
regional part of forebrain | 1.32e-11 | 41 |
forebrain | 1.32e-11 | 41 |
anterior neural tube | 1.32e-11 | 41 |
future forebrain | 1.32e-11 | 41 |
regional part of nervous system | 3.15e-11 | 53 |
regional part of brain | 3.15e-11 | 53 |
brain | 8.52e-11 | 68 |
future brain | 8.52e-11 | 68 |
central nervous system | 8.57e-11 | 81 |
nervous system | 2.38e-10 | 89 |
brain grey matter | 5.62e-09 | 34 |
gray matter | 5.62e-09 | 34 |
regional part of telencephalon | 7.03e-09 | 32 |
telencephalon | 7.30e-09 | 34 |
cerebral hemisphere | 8.67e-09 | 32 |
ectoderm-derived structure | 3.73e-08 | 171 |
ectoderm | 3.73e-08 | 171 |
presumptive ectoderm | 3.73e-08 | 171 |
ecto-epithelium | 1.81e-07 | 104 |
regional part of cerebral cortex | 6.37e-07 | 22 |
adult organism | 7.15e-07 | 114 |