FFCP PHASE1:Hg19::chr11:67275568..67275585,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:67275568..67275585,-
|short_description=p5@CDK2AP2
|description=CAGE_peak_5_at_CDK2AP2_5end
|association_with_transcript=-6bp_to_ENST00000531506_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10263 | |EntrezGene=10263 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30833 | |HGNC=30833 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKR4 | |UniProt=E9PKR4 | ||
|association_with_transcript=-6bp_to_ENST00000531506_5end | |||
|cluster_id=chr11:67275568..67275585,- | |||
|coexpression_cluster_id=C3194 | |||
|description=CAGE_peak_5_at_CDK2AP2_5end | |||
|id=chr11:67275568..67275585,- | |||
|ontology_enrichment_celltype=CL:0002321!2.07e-19!248;CL:0000220!3.12e-19!246;CL:0000066!3.38e-17!254;CL:0000222!8.68e-13!119;CL:0002078!3.08e-10!44;CL:0000115!3.62e-10!35;CL:0000548!4.38e-10!679;CL:0000004!4.38e-10!679;CL:0000255!4.38e-10!679;CL:0000012!9.49e-10!682;CL:1000449!3.85e-09!16;CL:0002371!4.76e-09!591;CL:1000497!7.16e-09!18;CL:0002518!7.16e-09!18;CL:0002139!1.17e-08!24;CL:0000071!4.57e-08!18;CL:0002546!4.57e-08!18;CL:0000003!4.63e-08!722;CL:0000144!4.72e-08!625;CL:0000055!4.74e-08!180;CL:0000183!8.39e-08!59;CL:0000213!1.01e-07!57;CL:0000215!1.01e-07!57;CL:0002681!1.47e-07!13;CL:0002584!1.47e-07!13;CL:0000359!4.52e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:1000449;6.13e-10;15!CL:0000115;2.00e-09;36!CL:1000497;2.30e-09;17!CL:0002518;2.30e-09;17!CL:0002139;7.30e-09;24!CL:0002681;2.38e-08;12!CL:0002584;2.38e-08;12!CL:0000071;2.55e-08;18!CL:0002078;2.60e-07;45!CL:1000507;7.03e-07;10!CL:1000494;7.03e-07;10!CL:0000359;7.21e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.45e-20,250;CL:0000066,1.97e-17,253;CL:0000222,5.07e-13,121;CL:0002078,1.10e-10,45;CL:0000115,1.23e-10,36;CL:1000449,6.57e-10,15;CL:1000497,1.52e-09,17;CL:0002518,1.52e-09,17;CL:0002139,1.14e-08,24;CL:0002681,2.52e-08,12;CL:0002584,2.52e-08,12;CL:0000213,4.30e-08,58;CL:0000215,4.30e-08,58;CL:0000071,4.44e-08,18;CL:0002546,4.44e-08,18;CL:0000359,4.41e-07,32;CL:1000507,6.77e-07,10;CL:1000494,6.77e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;2.55e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.52e-21!118;UBERON:0002100!1.45e-16!216;UBERON:0005256!1.74e-15!143;UBERON:0002049!4.37e-14!79;UBERON:0007798!4.37e-14!79;UBERON:0000055!1.61e-13!69;UBERON:0004872!2.90e-13!84;UBERON:0001009!6.59e-13!113;UBERON:0000490!1.31e-12!138;UBERON:0004535!2.37e-12!110;UBERON:0009569!3.41e-12!113;UBERON:0003104!7.80e-12!238;UBERON:0009142!7.80e-12!238;UBERON:0001981!9.84e-12!60;UBERON:0007500!9.84e-12!60;UBERON:0004537!9.84e-12!60;UBERON:0006965!9.84e-12!60;UBERON:0000477!1.50e-11!286;UBERON:0004111!3.36e-11!241;UBERON:0000119!4.69e-11!312;UBERON:0000483!1.47e-10!309;UBERON:0003064!2.10e-09!37;UBERON:0001637!3.44e-09!42;UBERON:0003509!3.44e-09!42;UBERON:0004572!3.44e-09!42;UBERON:0004211!3.85e-09!16;UBERON:0001285!3.85e-09!16;UBERON:0007684!3.85e-09!16;UBERON:0003220!3.85e-09!16;UBERON:0004208!3.85e-09!16;UBERON:0000487!5.73e-09!22;UBERON:0001008!7.56e-09!45;UBERON:0002417!7.76e-09!61;UBERON:0000916!7.76e-09!61;UBERON:0006555!8.23e-09!17;UBERON:0005103!8.23e-09!17;UBERON:0000083!8.23e-09!17;UBERON:0009201!8.23e-09!17;UBERON:0004819!8.23e-09!17;UBERON:0006553!8.23e-09!17;UBERON:0003074!8.23e-09!17;UBERON:0003060!8.23e-09!17;UBERON:0000080!9.47e-09!18;UBERON:0002120!9.47e-09!18;UBERON:0004875!9.47e-09!18;UBERON:0005721!9.47e-09!18;UBERON:0005754!9.47e-09!18;UBERON:0007297!9.47e-09!18;UBERON:0006554!1.24e-08!44;UBERON:0000481!1.41e-08!347;UBERON:0004876!2.47e-08!20;UBERON:0000475!3.62e-08!365;UBERON:0001986!4.57e-08!18;UBERON:0004638!4.57e-08!18;UBERON:0004852!4.57e-08!18;UBERON:0005172!5.61e-08!55;UBERON:0005173!5.61e-08!55;UBERON:0000025!7.46e-08!194;UBERON:0001851!7.93e-08!16;UBERON:0000058!1.21e-07!26;UBERON:0001225!1.47e-07!13;UBERON:0008987!1.47e-07!13;UBERON:0006914!1.74e-07!25;UBERON:0003887!2.14e-07!21;UBERON:0003103!2.58e-07!69;UBERON:0000353!3.00e-07!17;UBERON:0000466!5.30e-07!126;UBERON:0000486!8.33e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.13e-10;15!UBERON:0004819;6.13e-10;15!UBERON:0001285;6.13e-10;15!UBERON:0007684;6.13e-10;15!UBERON:0003914;8.61e-10;74!UBERON:0000487;2.79e-09;22!UBERON:0001851;9.72e-09;15!UBERON:0006554;1.32e-08;30!UBERON:0001008;1.32e-08;30!UBERON:0001225;2.38e-08;12!UBERON:0008987;2.38e-08;12!UBERON:0004638;2.55e-08;18!UBERON:0001986;2.55e-08;18!UBERON:0004852;2.55e-08;18!UBERON:0000353;2.59e-08;15!UBERON:0007500;8.95e-08;56!UBERON:0001981;8.95e-08;56!UBERON:0004537;8.95e-08;56!UBERON:0006914;1.08e-07;25!UBERON:0000490;1.65e-07;33!UBERON:0000055;1.69e-07;65!UBERON:0000025;2.05e-07;93!UBERON:0002049;5.86e-07;75!UBERON:0007798;5.86e-07;75!UBERON:0004211;7.03e-07;10!UBERON:0009773;7.03e-07;10!UBERON:0001231;7.03e-07;10!UBERON:0004810;7.03e-07;10 | |||
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| ||
|short_description=p5@CDK2AP2 | |||
}} | }} |
Latest revision as of 18:41, 19 September 2015
Short description: | p5@CDK2AP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CDK2AP2_5end |
Coexpression cluster: | C3194_Renal_pleomorphic_Alveolar_Mesenchymal_Osteoblast_gastric_glioma |
Association with transcript: | -6bp_to_ENST00000531506_5end |
EntrezGene: | CDK2AP2 |
HGNC: | 30833 |
UniProt: | E9PKR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.45e-20 | 250 |
epithelial cell | 1.97e-17 | 253 |
mesodermal cell | 5.07e-13 | 121 |
meso-epithelial cell | 1.10e-10 | 45 |
endothelial cell | 1.23e-10 | 36 |
epithelial cell of nephron | 6.57e-10 | 15 |
kidney cell | 1.52e-09 | 17 |
kidney epithelial cell | 1.52e-09 | 17 |
endothelial cell of vascular tree | 1.14e-08 | 24 |
kidney cortical cell | 2.52e-08 | 12 |
renal cortical epithelial cell | 2.52e-08 | 12 |
lining cell | 4.30e-08 | 58 |
barrier cell | 4.30e-08 | 58 |
blood vessel endothelial cell | 4.44e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.44e-08 | 18 |
vascular associated smooth muscle cell | 4.41e-07 | 32 |
kidney tubule cell | 6.77e-07 | 10 |
nephron tubule epithelial cell | 6.77e-07 | 10 |