FFCP PHASE1:Hg19::chr6:110012380..110012410,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:110012380..110012410,- to FFCP PHASE1:Hg19::chr6:110012380..110012410,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221264 | |EntrezGene=221264 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33814 | |HGNC=33814 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBV8,Q5TCS8 | |UniProt=F8WBV8,Q5TCS8 | ||
|association_with_transcript=4bp_to_ENST00000341338,ENST00000424296,NM_001145128,NM_145025,uc003ptn.2,uc003ptr.3_5end | |||
|cluster_id=chr6:110012380..110012410,- | |||
|description=CAGE_peak_1_at_AKD1_5end | |||
|id=chr6:110012380..110012410,- | |||
|ontology_enrichment_celltype=CL:0000542!1.40e-09!53;CL:0000051!1.40e-09!53;CL:0000838!2.25e-09!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.08e-10,53;CL:0000051,8.08e-10,53;CL:0000838,1.32e-09,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.57e-36!115;UBERON:0001049!2.08e-17!57;UBERON:0005068!2.08e-17!57;UBERON:0006241!2.08e-17!57;UBERON:0007135!2.08e-17!57;UBERON:0003080!7.20e-14!42;UBERON:0002616!2.27e-13!59;UBERON:0002780!2.28e-13!41;UBERON:0001890!2.28e-13!41;UBERON:0006240!2.28e-13!41;UBERON:0001017!3.61e-12!82;UBERON:0005743!1.73e-11!86;UBERON:0000073!7.71e-11!94;UBERON:0001016!7.71e-11!94;UBERON:0000955!1.08e-10!69;UBERON:0006238!1.08e-10!69;UBERON:0002020!3.26e-10!34;UBERON:0003528!3.26e-10!34;UBERON:0001893!4.84e-10!34;UBERON:0003075!1.18e-09!86;UBERON:0007284!1.18e-09!86;UBERON:0002791!1.30e-09!33;UBERON:0002346!2.52e-09!90;UBERON:0001869!3.70e-09!32;UBERON:0002619!3.66e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.12e-10;114!UBERON:0000073;6.90e-10;53!UBERON:0002616;6.90e-10;53!UBERON:0002780;8.97e-10;41!UBERON:0001890;8.97e-10;41!UBERON:0001893;1.16e-08;34!UBERON:0003528;1.38e-08;34!UBERON:0002020;1.38e-08;34!UBERON:0002791;3.43e-08;32!UBERON:0001869;3.74e-08;32!UBERON:0002619;2.03e-07;22!UBERON:0001950;6.69e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.40e-36,114;UBERON:0001049,2.34e-17,56;UBERON:0005068,2.34e-17,56;UBERON:0006241,2.34e-17,56;UBERON:0007135,2.34e-17,56;UBERON:0000073,6.51e-16,53;UBERON:0002616,6.51e-16,53;UBERON:0002780,1.03e-13,41;UBERON:0001890,1.03e-13,41;UBERON:0003080,1.03e-13,41;UBERON:0006240,1.03e-13,41;UBERON:0001017,6.44e-12,81;UBERON:0001016,2.32e-11,89;UBERON:0000955,1.43e-10,68;UBERON:0006238,1.43e-10,68;UBERON:0003528,1.76e-10,34;UBERON:0002020,1.76e-10,34;UBERON:0001893,2.64e-10,34;UBERON:0003075,5.14e-10,82;UBERON:0007284,5.14e-10,82;UBERON:0002346,1.19e-09,86;UBERON:0002791,1.89e-09,32;UBERON:0001869,2.13e-09,32;UBERON:0002619,1.78e-07,22;UBERON:0001950,5.33e-07,20;UBERON:0011216,6.49e-07,223 | |||
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| ||
|short_description=p1@AKD1 | |||
}} | }} |
Latest revision as of 18:59, 19 September 2015
Short description: | p1@AKD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AKD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000341338, ENST00000424296, NM_001145128, NM_145025, uc003ptn.2, uc003ptr.3_5end |
EntrezGene: | AKD1 |
HGNC: | 33814 |
UniProt: | F8WBV8Q5TCS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.08e-10 | 53 |
common lymphoid progenitor | 8.08e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.32e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.40e-36 | 114 |
neural tube | 2.34e-17 | 56 |
neural rod | 2.34e-17 | 56 |
future spinal cord | 2.34e-17 | 56 |
neural keel | 2.34e-17 | 56 |
regional part of nervous system | 6.51e-16 | 53 |
regional part of brain | 6.51e-16 | 53 |
regional part of forebrain | 1.03e-13 | 41 |
forebrain | 1.03e-13 | 41 |
anterior neural tube | 1.03e-13 | 41 |
future forebrain | 1.03e-13 | 41 |
central nervous system | 6.44e-12 | 81 |
nervous system | 2.32e-11 | 89 |
brain | 1.43e-10 | 68 |
future brain | 1.43e-10 | 68 |
brain grey matter | 1.76e-10 | 34 |
gray matter | 1.76e-10 | 34 |
telencephalon | 2.64e-10 | 34 |
neural plate | 5.14e-10 | 82 |
presumptive neural plate | 5.14e-10 | 82 |
neurectoderm | 1.19e-09 | 86 |
regional part of telencephalon | 1.89e-09 | 32 |
cerebral hemisphere | 2.13e-09 | 32 |
regional part of cerebral cortex | 1.78e-07 | 22 |
neocortex | 5.33e-07 | 20 |
organ system subdivision | 6.49e-07 | 223 |