FFCP PHASE1:Hg19::chr3:119813323..119813330,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:119813323..119813330,- to FFCP PHASE1:Hg19::chr3:119813323..119813330,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2932 | |EntrezGene=2932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4617 | |HGNC=4617 | ||
|TSSclassifier=strong | |||
|UniProt=P49841,Q6FI27 | |UniProt=P49841,Q6FI27 | ||
|association_with_transcript=-59bp_to_ENST00000264235,NM_001146156,NM_002093,uc003edn.2,uc003edo.2_5end | |||
|cluster_id=chr3:119813323..119813330,- | |||
|description=CAGE_peak_4_at_GSK3B_5end | |||
|id=chr3:119813323..119813330,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.66e-10!115;UBERON:0001017!1.63e-09!82;UBERON:0005743!1.09e-08!86;UBERON:0000955!1.65e-08!69;UBERON:0006238!1.65e-08!69;UBERON:0001049!3.76e-08!57;UBERON:0005068!3.76e-08!57;UBERON:0006241!3.76e-08!57;UBERON:0007135!3.76e-08!57;UBERON:0003080!4.32e-08!42;UBERON:0002780!4.60e-08!41;UBERON:0001890!4.60e-08!41;UBERON:0006240!4.60e-08!41;UBERON:0004121!7.36e-08!169;UBERON:0002616!8.01e-08!59;UBERON:0000073!1.91e-07!94;UBERON:0001016!1.91e-07!94;UBERON:0002619!2.02e-07!22;UBERON:0001893!2.30e-07!34;UBERON:0000956!2.35e-07!25;UBERON:0000203!2.35e-07!25;UBERON:0000033!2.36e-07!123;UBERON:0000153!2.65e-07!129;UBERON:0007811!2.65e-07!129;UBERON:0000924!4.51e-07!173;UBERON:0006601!4.51e-07!173;UBERON:0002020!5.32e-07!34;UBERON:0003528!5.32e-07!34;UBERON:0002791!5.97e-07!33;UBERON:0001869!8.55e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.16e-07;22!UBERON:0000956;3.06e-07;25!UBERON:0000203;3.06e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.37e-10,114;UBERON:0001017,1.43e-09,81;UBERON:0000955,1.29e-08,68;UBERON:0006238,1.29e-08,68;UBERON:0002780,2.88e-08,41;UBERON:0001890,2.88e-08,41;UBERON:0003080,2.88e-08,41;UBERON:0006240,2.88e-08,41;UBERON:0001049,3.15e-08,56;UBERON:0005068,3.15e-08,56;UBERON:0006241,3.15e-08,56;UBERON:0007135,3.15e-08,56;UBERON:0000073,4.43e-08,53;UBERON:0002616,4.43e-08,53;UBERON:0001016,4.74e-08,89;UBERON:0010371,5.84e-08,104;UBERON:0002619,9.15e-08,22;UBERON:0000956,1.11e-07,25;UBERON:0000203,1.11e-07,25;UBERON:0001893,1.47e-07,34;UBERON:0003528,3.46e-07,34;UBERON:0002020,3.46e-07,34;UBERON:0004121,4.45e-07,171;UBERON:0000924,4.45e-07,171;UBERON:0006601,4.45e-07,171;UBERON:0001950,5.40e-07,20;UBERON:0001869,5.58e-07,32;UBERON:0002791,8.07e-07,32 | |||
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| ||
|short_description=p4@GSK3B | |||
}} | }} |
Latest revision as of 21:25, 19 September 2015
Short description: | p4@GSK3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GSK3B_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_ENST00000264235, NM_001146156, NM_002093, uc003edn.2, uc003edo.2_5end |
EntrezGene: | GSK3B |
HGNC: | 4617 |
UniProt: | P49841Q6FI27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.37e-10 | 114 |
central nervous system | 1.43e-09 | 81 |
brain | 1.29e-08 | 68 |
future brain | 1.29e-08 | 68 |
regional part of forebrain | 2.88e-08 | 41 |
forebrain | 2.88e-08 | 41 |
anterior neural tube | 2.88e-08 | 41 |
future forebrain | 2.88e-08 | 41 |
neural tube | 3.15e-08 | 56 |
neural rod | 3.15e-08 | 56 |
future spinal cord | 3.15e-08 | 56 |
neural keel | 3.15e-08 | 56 |
regional part of nervous system | 4.43e-08 | 53 |
regional part of brain | 4.43e-08 | 53 |
nervous system | 4.74e-08 | 89 |
ecto-epithelium | 5.84e-08 | 104 |
regional part of cerebral cortex | 9.15e-08 | 22 |
cerebral cortex | 1.11e-07 | 25 |
pallium | 1.11e-07 | 25 |
telencephalon | 1.47e-07 | 34 |
brain grey matter | 3.46e-07 | 34 |
gray matter | 3.46e-07 | 34 |
ectoderm-derived structure | 4.45e-07 | 171 |
ectoderm | 4.45e-07 | 171 |
presumptive ectoderm | 4.45e-07 | 171 |
neocortex | 5.40e-07 | 20 |
cerebral hemisphere | 5.58e-07 | 32 |
regional part of telencephalon | 8.07e-07 | 32 |