FFCP PHASE1:Hg19::chr3:9851632..9851661,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:9851632..9851661,+ to FFCP PHASE1:Hg19::chr3:9851632..9851661,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26140 | |EntrezGene=26140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24483 | |HGNC=24483 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y4R7 | |UniProt=Q9Y4R7 | ||
|association_with_transcript=0bp_to_NM_001025930,NR_037162,uc003btf.3_5end | |||
|cluster_id=chr3:9851632..9851661,+ | |||
|description=CAGE_peak_7_at_TTLL3_5end | |||
|id=chr3:9851632..9851661,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.38e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!8.72e-21!59;UBERON:0007023!9.42e-21!115;UBERON:0000955!1.01e-20!69;UBERON:0006238!1.01e-20!69;UBERON:0002346!3.97e-20!90;UBERON:0001049!5.13e-20!57;UBERON:0005068!5.13e-20!57;UBERON:0006241!5.13e-20!57;UBERON:0007135!5.13e-20!57;UBERON:0000073!1.10e-18!94;UBERON:0001016!1.10e-18!94;UBERON:0003075!1.19e-18!86;UBERON:0007284!1.19e-18!86;UBERON:0001017!2.93e-18!82;UBERON:0005743!5.05e-18!86;UBERON:0003080!2.86e-17!42;UBERON:0002780!1.28e-16!41;UBERON:0001890!1.28e-16!41;UBERON:0006240!1.28e-16!41;UBERON:0003056!6.40e-16!61;UBERON:0001893!3.01e-14!34;UBERON:0000153!3.03e-14!129;UBERON:0007811!3.03e-14!129;UBERON:0002791!7.72e-14!33;UBERON:0000033!9.23e-14!123;UBERON:0002020!1.10e-13!34;UBERON:0003528!1.10e-13!34;UBERON:0001869!4.55e-13!32;UBERON:0000924!7.54e-12!173;UBERON:0006601!7.54e-12!173;UBERON:0004121!8.58e-11!169;UBERON:0000475!4.12e-10!365;UBERON:0001950!1.25e-09!20;UBERON:0000956!1.92e-09!25;UBERON:0000203!1.92e-09!25;UBERON:0002619!2.09e-09!22;UBERON:0000481!2.30e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.70e-11;49!UBERON:0006947;7.12e-09;3!UBERON:0004054;7.12e-09;3!UBERON:0001896;4.98e-08;3!UBERON:0005290;4.98e-08;3!UBERON:0003135;6.08e-08;11!UBERON:0002780;1.32e-07;41!UBERON:0001890;1.32e-07;41!UBERON:0000073;5.80e-07;53!UBERON:0002616;5.80e-07;53!UBERON:0005904;9.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.82e-19,114;UBERON:0002346,1.36e-12,86;UBERON:0003075,2.60e-12,82;UBERON:0007284,2.60e-12,82;UBERON:0001049,5.26e-10,56;UBERON:0005068,5.26e-10,56;UBERON:0006241,5.26e-10,56;UBERON:0007135,5.26e-10,56;UBERON:0000073,1.53e-09,53;UBERON:0002616,1.53e-09,53;UBERON:0010371,2.02e-09,104;UBERON:0006947,3.50e-09,3;UBERON:0004054,3.50e-09,3;UBERON:0002780,1.02e-08,41;UBERON:0001890,1.02e-08,41;UBERON:0003080,1.02e-08,41;UBERON:0006240,1.02e-08,41;UBERON:0001896,1.49e-08,3;UBERON:0005290,1.49e-08,3;UBERON:0010096,1.49e-08,3;UBERON:0003135,2.64e-08,11;UBERON:0003056,1.07e-07,61;UBERON:0000955,1.77e-07,68;UBERON:0006238,1.77e-07,68;UBERON:0005904,5.88e-07,4;UBERON:0010314,7.87e-07,132 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0.602694528023977,0,0,0,0.408001382488506,0,0,0.958120975510189,0.502170558379211,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.451725357233318,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0.665188192387692,0.614843499851882,1.30979075497713,0,0,0,0,0.398873881556595,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0.366403487860815,0,0,0,0.496971951695318,0.12663051166458,1.05927344650575,1.43418310374407,0,0,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0.302714855289863,0.576175924479999,0.937285727335186,0.312160076830321,0.570471821544449,0,0,0.161872944368132,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0.179389635688862,0.427114777637135,0,0.600182192168805,0.412210116953756,0.772921620136887,0.558350568994769,1.18143432568886,0.0974370051611986,0.504867548488229,0.184099797284599,1.13152239773168,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0.234817388471643,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0.414656231081544,0.144119953416961,0.6312121671319,0.126995788584338,0,2.34434894420094,0,0.102827492703324,0,0.857479297891735,0,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,1.00034104211935,0,0.415941723061614,0,0.157702415033935,0.35142424497814,0,0,1.03473071292505,0,0,0.260650843404249,0,0.343143423810856,0,0,0.106727557803444,0,0,0.604780586659361,0,0.767309866440312,0,0.256278298511402,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.581051892299796,0,0.200506470303285,0,0,0,1.04899531967539,0.451199612907412,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0,0.082509499920588,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.137836572484531,0.644521469209642,0.290033387828457,0.255679882248303,0.534192213880424,0,0,0.382838137483752,0,0,0.62962469366128,0,0,0,0.869932992075073,0,0.143124886741991,0.744316738719335,0.632758849437452,0.953150969619124,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0,0,1.04980416073495,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0,0,0,0,0.33307196799782,0,0.37428108081644,0.439524537815682,0,0,0.284136146806413,0.23874448473769,0,1.22864280839693,0,0.984685914873589,0.222617410045812,0,1.26675244876796,0.398495976502139,1.38141957765574,0.503865495708552,0.20453736500431,0,0,0,0,0.511572370226872,0.690503839458535,0,0,2.90799823828566,0.649376687132959,0,0.260427761085233,0.0874599999961957,1.44999915086959,0.227586896570999,0.254253650292766,0,0,0.291604613383254,0.694499979733169,0.885741385813839,1.80894657938112,0,0.442317039724898,0.886642856860642,0,0.21787692703798,0,4.07836370070124,0.341826167541004,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0.225595660617181,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0.995261931078505,0.796118080530053,0.611030144933625,0,0,0,1.95463285643963,2.40773294189637,0.937057782901357,0,0,0.242780379534093,1.57833761139756,2.41981432097328,0.61214552326098,0.568679216656392,0,0,0,0,0.313932918407225,2.38944859545918,0,0,0,0,0,2.62090002363045,0.171986032471617,0.0967563312890851,0.146178634172371,0,0.193978032976839,1.1473296469895,0.90392296312213,0,0,0.759729551470544,0.586654148204409,0.160317640503067,0.85381197895741,0.19980960958213,0,0,0.686379991447858,0.14405479798815,0.621262677827163,0,0,0,0.305994652908965,0.577901179803038,0.600420288709789,1.50595916781192,1.2774658806697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| ||
|short_description=p7@TTLL3 | |||
}} | }} |
Latest revision as of 22:39, 19 September 2015
Short description: | p7@TTLL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TTLL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001025930, NR_037162, uc003btf.3_5end |
EntrezGene: | TTLL3 |
HGNC: | 24483 |
UniProt: | Q9Y4R7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 9.82e-19 | 114 |
neurectoderm | 1.36e-12 | 86 |
neural plate | 2.60e-12 | 82 |
presumptive neural plate | 2.60e-12 | 82 |
neural tube | 5.26e-10 | 56 |
neural rod | 5.26e-10 | 56 |
future spinal cord | 5.26e-10 | 56 |
neural keel | 5.26e-10 | 56 |
regional part of nervous system | 1.53e-09 | 53 |
regional part of brain | 1.53e-09 | 53 |
ecto-epithelium | 2.02e-09 | 104 |
male genital duct | 3.50e-09 | 3 |
internal male genitalia | 3.50e-09 | 3 |
regional part of forebrain | 1.02e-08 | 41 |
forebrain | 1.02e-08 | 41 |
anterior neural tube | 1.02e-08 | 41 |
future forebrain | 1.02e-08 | 41 |
medulla oblongata | 1.49e-08 | 3 |
myelencephalon | 1.49e-08 | 3 |
future myelencephalon | 1.49e-08 | 3 |
male reproductive organ | 2.64e-08 | 11 |
pre-chordal neural plate | 1.07e-07 | 61 |
brain | 1.77e-07 | 68 |
future brain | 1.77e-07 | 68 |
duct of male reproductive system | 5.88e-07 | 4 |
structure with developmental contribution from neural crest | 7.87e-07 | 132 |