FFCP PHASE1:Hg19::chr10:95242150..95242208,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:95242150..95242208,- to FFCP PHASE1:Hg19::chr10:95242150..95242208,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26509 | |EntrezGene=26509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3656 | |HGNC=3656 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8J4,C9JCN0,Q9NZM1 | |UniProt=F8W8J4,C9JCN0,Q9NZM1 | ||
|association_with_transcript=-76bp_to_ENST00000371489,ENST00000371501,ENST00000371502,NM_013451,NM_133337,uc001kin.2,uc001kio.2,uc001kip.3,uc009xuf.2_5end | |||
|cluster_id=chr10:95242150..95242208,- | |||
|description=CAGE_peak_3_at_MYOF_5end | |||
|id=chr10:95242150..95242208,- | |||
|ontology_enrichment_celltype=CL:0002057!3.20e-23!42;CL:0002009!8.91e-23!65;CL:0002194!6.22e-22!63;CL:0000576!6.22e-22!63;CL:0000040!6.22e-22!63;CL:0000559!6.22e-22!63;CL:0000860!3.47e-20!45;CL:0000557!1.00e-17!71;CL:0000839!1.65e-15!70;CL:0000766!4.78e-13!76;CL:0000222!2.40e-12!119;CL:0002371!4.22e-11!591;CL:0000055!8.44e-11!180;CL:0000057!8.63e-10!75;CL:0000213!2.13e-09!57;CL:0000215!2.13e-09!57;CL:0000548!2.36e-09!679;CL:0000004!2.36e-09!679;CL:0000255!2.36e-09!679;CL:0000144!6.17e-09!625;CL:0002620!6.31e-09!23;CL:0000012!8.55e-09!682;CL:0002139!1.06e-08!24;CL:0000115!6.42e-08!35;CL:0002078!1.47e-07!44;CL:0000071!5.56e-07!18;CL:0002546!5.56e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.49e-18;33!CL:0002057;4.49e-18;33!CL:0000473;8.29e-18;39!CL:0000234;8.29e-18;39!CL:0000576;1.33e-12;48!CL:0002620;6.25e-09;23!CL:0002139;1.01e-08;24!CL:0000766;1.14e-07;69!CL:0000115;4.06e-07;36!CL:0000071;5.68e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.66e-26,48;CL:0000234,2.66e-26,48;CL:0002009,8.67e-25,61;CL:0002194,6.23e-24,59;CL:0000576,6.23e-24,59;CL:0000040,6.23e-24,59;CL:0000559,6.23e-24,59;CL:0000860,2.59e-23,42;CL:0002057,2.59e-23,42;CL:0000557,3.73e-19,67;CL:0000839,7.01e-17,66;CL:0000766,2.88e-14,72;CL:0000222,6.90e-13,121;CL:0000057,2.73e-10,76;CL:0000213,9.01e-10,58;CL:0000215,9.01e-10,58;CL:0002620,5.88e-09,23;CL:0002139,9.85e-09,24;CL:0000115,2.89e-08,36;CL:0002078,6.39e-08,45;CL:0000071,5.28e-07,18;CL:0002546,5.28e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;5.10e-17;42!CL:0002546;5.68e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.17e-23!216;UBERON:0000467!3.94e-20!625;UBERON:0000468!4.40e-20!659;UBERON:0000480!8.36e-20!626;UBERON:0000926!2.66e-19!448;UBERON:0004120!2.66e-19!448;UBERON:0006603!2.66e-19!448;UBERON:0002204!1.19e-18!167;UBERON:0002371!1.06e-16!80;UBERON:0004765!3.08e-16!101;UBERON:0001434!3.08e-16!101;UBERON:0001474!3.45e-16!86;UBERON:0002193!8.20e-13!112;UBERON:0002049!2.57e-12!79;UBERON:0007798!2.57e-12!79;UBERON:0000055!9.48e-12!69;UBERON:0002390!1.50e-11!102;UBERON:0003061!1.50e-11!102;UBERON:0002050!1.96e-11!605;UBERON:0005423!1.96e-11!605;UBERON:0000923!3.26e-11!604;UBERON:0005291!3.26e-11!604;UBERON:0006598!3.26e-11!604;UBERON:0002532!3.26e-11!604;UBERON:0001981!6.41e-11!60;UBERON:0007500!6.41e-11!60;UBERON:0004537!6.41e-11!60;UBERON:0006965!6.41e-11!60;UBERON:0000062!7.71e-11!511;UBERON:0000922!4.58e-10!612;UBERON:0002405!4.93e-10!115;UBERON:0004535!6.86e-10!110;UBERON:0001009!2.69e-09!113;UBERON:0004872!3.63e-09!84;UBERON:0001637!5.34e-08!42;UBERON:0003509!5.34e-08!42;UBERON:0004572!5.34e-08!42;UBERON:0002097!4.91e-07!40;UBERON:0001986!5.56e-07!18;UBERON:0004638!5.56e-07!18;UBERON:0004852!5.56e-07!18;UBERON:0002100!5.79e-07!216;UBERON:0003914!6.10e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.68e-07;18!UBERON:0001986;5.68e-07;18!UBERON:0004852;5.68e-07;18!UBERON:0007500;7.51e-07;56!UBERON:0001981;7.51e-07;56!UBERON:0004537;7.51e-07;56 | |||
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| ||
|short_description=p3@MYOF | |||
}} | }} |
Latest revision as of 01:29, 20 September 2015
Short description: | p3@MYOF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYOF_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_ENST00000371489, ENST00000371501, ENST00000371502, NM_013451, NM_133337, uc001kin.2, uc001kio.2, uc001kip.3, uc009xuf.2_5end |
EntrezGene: | MYOF |
HGNC: | 3656 |
UniProt: | F8W8J4C9JCN0Q9NZM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.66e-26 | 48 |
phagocyte | 2.66e-26 | 48 |
macrophage dendritic cell progenitor | 8.67e-25 | 61 |
monopoietic cell | 6.23e-24 | 59 |
monocyte | 6.23e-24 | 59 |
monoblast | 6.23e-24 | 59 |
promonocyte | 6.23e-24 | 59 |
classical monocyte | 2.59e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.59e-23 | 42 |
granulocyte monocyte progenitor cell | 3.73e-19 | 67 |
myeloid lineage restricted progenitor cell | 7.01e-17 | 66 |
myeloid leukocyte | 2.88e-14 | 72 |
mesodermal cell | 6.90e-13 | 121 |
fibroblast | 2.73e-10 | 76 |
lining cell | 9.01e-10 | 58 |
barrier cell | 9.01e-10 | 58 |
skin fibroblast | 5.88e-09 | 23 |
endothelial cell of vascular tree | 9.85e-09 | 24 |
endothelial cell | 2.89e-08 | 36 |
meso-epithelial cell | 6.39e-08 | 45 |
blood vessel endothelial cell | 5.28e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.28e-07 | 18 |