FFCP PHASE1:Hg19::chr16:10971144..10971153,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:10971144..10971153,+ to FFCP PHASE1:Hg19::chr16:10971144..10971153,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4261 | |EntrezGene=4261 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7067 | |HGNC=7067 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2J4 | |UniProt=F5H2J4 | ||
|association_with_transcript=-34bp_to_ENST00000537380_5end | |||
|cluster_id=chr16:10971144..10971153,+ | |||
|coexpression_cluster_id=C1207 | |||
|description=CAGE_peak_4_at_CIITA_5end | |||
|id=chr16:10971144..10971153,+ | |||
|ontology_enrichment_celltype=CL:0002009!4.47e-43!65;CL:0002087!1.07e-40!119;CL:0002194!1.81e-40!63;CL:0000576!1.81e-40!63;CL:0000040!1.81e-40!63;CL:0000559!1.81e-40!63;CL:0000557!6.37e-40!71;CL:0000738!2.07e-39!140;CL:0002057!5.16e-38!42;CL:0002031!5.82e-36!124;CL:0000839!1.15e-34!70;CL:0000037!1.38e-34!172;CL:0000566!1.38e-34!172;CL:0000860!1.61e-34!45;CL:0000988!6.39e-33!182;CL:0002032!1.21e-32!165;CL:0000837!1.21e-32!165;CL:0000766!3.92e-32!76;CL:0000763!5.21e-29!112;CL:0000049!5.21e-29!112;CL:0000990!1.35e-12!8;CL:0000451!7.98e-10!10;CL:0000840!1.23e-08!5;CL:0001029!1.23e-08!5;CL:0000453!2.37e-08!5;CL:0000134!4.76e-08!358;CL:0000945!1.17e-07!24;CL:0000826!1.17e-07!24;CL:0002320!1.83e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000473;9.80e-50;39!CL:0000234;9.80e-50;39!CL:0000860;6.01e-48;33!CL:0002057;6.01e-48;33!CL:0000990;5.18e-28;8!CL:0000453;6.26e-27;5!CL:0000576;8.11e-27;48!CL:0000451;9.26e-23;10!CL:0000766;4.71e-20;69!CL:0000840;2.66e-14;5!CL:0000235;5.56e-14;6!CL:0001014;4.89e-12;2!CL:0001016;4.89e-12;2!CL:0000738;6.52e-11;136!CL:0000763;7.82e-11;100!CL:0002087;1.50e-07;104!CL:0002032;9.15e-07;1!CL:0000557;9.15e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,4.93e-60,61;CL:0000557,1.53e-58,67;CL:0000473,2.79e-57,48;CL:0000234,2.79e-57,48;CL:0002194,6.77e-53,59;CL:0000576,6.77e-53,59;CL:0000040,6.77e-53,59;CL:0000559,6.77e-53,59;CL:0000839,8.88e-47,66;CL:0000860,3.15e-45,42;CL:0002057,3.15e-45,42;CL:0000763,9.08e-43,108;CL:0000049,9.08e-43,108;CL:0000766,1.82e-42,72;CL:0000738,6.24e-35,136;CL:0002031,1.80e-32,120;CL:0002032,1.20e-30,161;CL:0000837,1.20e-30,161;CL:0000037,4.24e-29,168;CL:0002087,4.74e-29,115;CL:0000990,6.48e-28,8;CL:0000988,2.75e-27,177;CL:0000453,6.11e-27,5;CL:0000451,1.11e-22,10;CL:0000840,3.28e-14,5;CL:0001029,3.28e-14,5;CL:0000235,4.16e-14,6;CL:0001014,4.89e-12,2;CL:0001016,4.89e-12,2;CL:0000134,2.91e-10,354;CL:0002320,6.27e-10,361;CL:0000219,9.32e-09,386;CL:0000034,1.41e-07,441;CL:0000048,2.53e-07,427;CL:0000723,4.00e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.62e-32;42!CL:0000049;1.56e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.38e-47!102;UBERON:0003061!1.38e-47!102;UBERON:0002193!9.39e-43!112;UBERON:0002371!1.99e-39!80;UBERON:0001474!2.73e-35!86;UBERON:0002405!1.17e-27!115;UBERON:0004765!3.65e-27!101;UBERON:0001434!3.65e-27!101;UBERON:0007023!4.16e-16!115;UBERON:0003081!4.62e-15!216;UBERON:0002204!2.79e-11!167;UBERON:0002384!4.59e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.51e-51,76;UBERON:0001474,7.40e-47,82;UBERON:0002390,3.22e-44,98;UBERON:0003061,3.22e-44,98;UBERON:0004765,3.37e-42,90;UBERON:0002405,1.17e-40,93;UBERON:0002193,1.41e-39,108;UBERON:0001434,2.06e-37,100;UBERON:0002204,5.00e-20,167;UBERON:0003081,1.27e-19,203;UBERON:0000926,2.56e-10,315;UBERON:0004120,2.56e-10,315;UBERON:0006603,2.56e-10,315;UBERON:0002384,1.78e-09,371 | |||
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|short_description=p4@CIITA | |||
}} | }} |
Latest revision as of 05:01, 20 September 2015
Short description: | p4@CIITA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CIITA_5end |
Coexpression cluster: | C1207_migratory_granulocyte_CD19_CD14_immature_adult_Dendritic |
Association with transcript: | -34bp_to_ENST00000537380_5end |
EntrezGene: | CIITA |
HGNC: | 7067 |
UniProt: | F5H2J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.51e-51 | 76 |
bone element | 7.40e-47 | 82 |
hematopoietic system | 3.22e-44 | 98 |
blood island | 3.22e-44 | 98 |
skeletal element | 3.37e-42 | 90 |
immune system | 1.17e-40 | 93 |
hemolymphoid system | 1.41e-39 | 108 |
skeletal system | 2.06e-37 | 100 |
musculoskeletal system | 5.00e-20 | 167 |
lateral plate mesoderm | 1.27e-19 | 203 |
mesoderm | 2.56e-10 | 315 |
mesoderm-derived structure | 2.56e-10 | 315 |
presumptive mesoderm | 2.56e-10 | 315 |
connective tissue | 1.78e-09 | 371 |