FFCP PHASE1:Hg19::chr9:114937764..114937777,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:114937764..114937777,- to FFCP PHASE1:Hg19::chr9:114937764..114937777,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64420 | |EntrezGene=64420 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25413 | |HGNC=25413 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UWL2 | |UniProt=Q6UWL2 | ||
|association_with_transcript=-76bp_to_ENST00000374270_5end | |||
|cluster_id=chr9:114937764..114937777,- | |||
|description=CAGE_peak_5_at_SUSD1_5end | |||
|id=chr9:114937764..114937777,- | |||
|ontology_enrichment_celltype=CL:0002057!2.11e-12!42;CL:0000860!2.52e-10!45;CL:0000766!3.96e-09!76;CL:0000557!9.42e-09!71;CL:0000839!1.60e-08!70;CL:0000763!3.29e-08!112;CL:0000049!3.29e-08!112;CL:0002194!7.41e-08!63;CL:0000576!7.41e-08!63;CL:0000040!7.41e-08!63;CL:0000559!7.41e-08!63;CL:0002009!1.12e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:1000449;6.90e-16;15!CL:0002681;1.50e-14;12!CL:0002584;1.50e-14;12!CL:1000497;1.39e-13;17!CL:0002518;1.39e-13;17!CL:0000860;9.08e-11;33!CL:0002057;9.08e-11;33!CL:1000507;1.25e-09;10!CL:1000494;1.25e-09;10!CL:1000746;4.30e-08;7!CL:1000612;4.30e-08;7!CL:0002188;4.46e-08;5!CL:0000473;4.50e-08;39!CL:0000234;4.50e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,8.78e-16,15;CL:0002681,2.50e-14,12;CL:0002584,2.50e-14,12;CL:1000497,1.71e-13,17;CL:0002518,1.71e-13,17;CL:0000860,4.11e-12,42;CL:0002057,4.11e-12,42;CL:0000473,6.52e-11,48;CL:0000234,6.52e-11,48;CL:0000766,3.96e-10,72;CL:0000763,4.76e-10,108;CL:0000049,4.76e-10,108;CL:1000507,1.02e-09,10;CL:1000494,1.02e-09,10;CL:0000839,1.26e-08,66;CL:0000557,2.11e-08,67;CL:1000746,6.21e-08,7;CL:1000612,6.21e-08,7;CL:0002188,7.65e-08,5;CL:0002194,1.58e-07,59;CL:0000576,1.58e-07,59;CL:0000040,1.58e-07,59;CL:0000559,1.58e-07,59;CL:0002009,4.19e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.76e-11!625;UBERON:0000480!2.85e-11!626;UBERON:0000062!2.28e-10!511;UBERON:0000468!2.31e-09!659;UBERON:0003081!3.70e-08!216;UBERON:0004876!8.87e-08!20;UBERON:0002050!1.16e-07!605;UBERON:0005423!1.16e-07!605;UBERON:0000923!1.37e-07!604;UBERON:0005291!1.37e-07!604;UBERON:0006598!1.37e-07!604;UBERON:0002532!1.37e-07!604;UBERON:0001049!1.75e-07!57;UBERON:0005068!1.75e-07!57;UBERON:0006241!1.75e-07!57;UBERON:0007135!1.75e-07!57;UBERON:0000922!2.90e-07!612;UBERON:0000025!3.45e-07!194;UBERON:0000080!3.70e-07!18;UBERON:0002120!3.70e-07!18;UBERON:0004875!3.70e-07!18;UBERON:0005721!3.70e-07!18;UBERON:0005754!3.70e-07!18;UBERON:0007297!3.70e-07!18;UBERON:0000479!4.20e-07!787;UBERON:0002371!5.22e-07!80;UBERON:0002616!6.60e-07!59;UBERON:0000955!7.03e-07!69;UBERON:0006238!7.03e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.90e-16;15!UBERON:0004819;6.90e-16;15!UBERON:0001285;6.90e-16;15!UBERON:0007684;6.90e-16;15!UBERON:0001225;1.50e-14;12!UBERON:0008987;1.50e-14;12!UBERON:0002113;1.35e-11;24!UBERON:0011143;1.35e-11;24!UBERON:0001851;4.64e-11;15!UBERON:0000353;4.64e-11;15!UBERON:0000489;3.17e-10;29!UBERON:0004211;1.25e-09;10!UBERON:0009773;1.25e-09;10!UBERON:0001231;1.25e-09;10!UBERON:0004810;1.25e-09;10!UBERON:0006554;1.80e-08;30!UBERON:0001008;1.80e-08;30!UBERON:0000074;4.30e-08;7!UBERON:0001229;4.30e-08;7 | |||
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| ||
|short_description=p5@SUSD1 | |||
}} | }} |
Latest revision as of 05:31, 20 September 2015
Short description: | p5@SUSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SUSD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_ENST00000374270_5end |
EntrezGene: | SUSD1 |
HGNC: | 25413 |
UniProt: | Q6UWL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 8.78e-16 | 15 |
kidney cortical cell | 2.50e-14 | 12 |
renal cortical epithelial cell | 2.50e-14 | 12 |
kidney cell | 1.71e-13 | 17 |
kidney epithelial cell | 1.71e-13 | 17 |
classical monocyte | 4.11e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.11e-12 | 42 |
defensive cell | 6.52e-11 | 48 |
phagocyte | 6.52e-11 | 48 |
myeloid leukocyte | 3.96e-10 | 72 |
myeloid cell | 4.76e-10 | 108 |
common myeloid progenitor | 4.76e-10 | 108 |
kidney tubule cell | 1.02e-09 | 10 |
nephron tubule epithelial cell | 1.02e-09 | 10 |
myeloid lineage restricted progenitor cell | 1.26e-08 | 66 |
granulocyte monocyte progenitor cell | 2.11e-08 | 67 |
glomerular cell | 6.21e-08 | 7 |
kidney corpuscule cell | 6.21e-08 | 7 |
glomerular endothelial cell | 7.65e-08 | 5 |
monopoietic cell | 1.58e-07 | 59 |
monocyte | 1.58e-07 | 59 |
monoblast | 1.58e-07 | 59 |
promonocyte | 1.58e-07 | 59 |
macrophage dendritic cell progenitor | 4.19e-07 | 61 |