FFCP PHASE1:Hg19::chr7:100770418..100770430,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:100770418..100770430,+
|short_description=p8@SERPINE1
|description=CAGE_peak_8_at_SERPINE1_5end
|association_with_transcript=33bp_to_uc003uxs.2_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5054 | |EntrezGene=5054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8583 | |HGNC=8583 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_uc003uxs.2_5end | |||
|cluster_id=chr7:100770418..100770430,+ | |||
|coexpression_cluster_id=C301 | |||
|description=CAGE_peak_8_at_SERPINE1_5end | |||
|id=chr7:100770418..100770430,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.77e-30!119;CL:0000055!1.37e-26!180;CL:0000144!1.05e-21!625;CL:0002371!7.32e-20!591;CL:0000220!4.53e-19!246;CL:0000359!6.39e-19!32;CL:0002321!1.75e-18!248;CL:0000192!2.47e-18!42;CL:0000514!2.47e-18!42;CL:0000680!2.51e-18!57;CL:0000056!2.51e-18!57;CL:0000355!2.51e-18!57;CL:0000183!1.12e-17!59;CL:0000187!3.20e-17!54;CL:0000548!9.11e-17!679;CL:0000004!9.11e-17!679;CL:0000255!9.11e-17!679;CL:0000012!3.65e-16!682;CL:0000057!3.35e-14!75;CL:0000393!5.47e-14!60;CL:0000211!5.47e-14!60;CL:0002139!5.69e-13!24;CL:0000213!8.17e-13!57;CL:0000215!8.17e-13!57;CL:0000115!3.79e-11!35;CL:0000071!5.55e-10!18;CL:0002546!5.55e-10!18;CL:0002078!7.55e-10!44;CL:0000003!3.26e-09!722;CL:0000048!7.46e-09!430;CL:0000723!1.12e-08!436;CL:0000034!1.05e-07!444;CL:0002620!5.46e-07!23;CL:1000413!7.94e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.40e-23;32!CL:0002139;1.68e-15;24!CL:0000192;1.88e-15;43!CL:0000115;9.31e-13;36!CL:0000071;2.35e-11;18!CL:0000187;2.51e-09;55!CL:1000413;5.01e-09;9!CL:0000213;7.54e-09;58!CL:0000215;7.54e-09;58!CL:0002494;1.20e-08;16!CL:0002539;3.99e-08;10!CL:0002078;8.14e-08;45!CL:0000393;3.29e-07;61!CL:0000211;3.29e-07;61!CL:0000134;4.00e-07;55!CL:0002595;9.96e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.90e-31,121;CL:0000359,2.12e-25,32;CL:0000192,1.69e-21,43;CL:0000514,1.69e-21,43;CL:0000680,1.38e-18,58;CL:0000056,1.38e-18,58;CL:0000355,1.38e-18,58;CL:0000187,7.72e-18,55;CL:0002139,1.90e-15,24;CL:0000393,9.68e-15,61;CL:0000211,9.68e-15,61;CL:0000115,1.49e-14,36;CL:0000213,4.63e-14,58;CL:0000215,4.63e-14,58;CL:0002321,2.07e-13,250;CL:0000048,6.33e-12,427;CL:0000057,7.82e-12,76;CL:0000071,2.71e-11,18;CL:0002546,2.71e-11,18;CL:0000723,3.23e-11,433;CL:0002078,1.05e-10,45;CL:0000034,2.56e-10,441;CL:1000413,5.73e-09,9;CL:0002494,1.53e-08,16;CL:0002539,3.94e-08,10;CL:0002595,9.86e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;1.88e-15;43!CL:0002546;2.35e-11;18!CL:0000355;4.97e-10;58!CL:0000222;1.04e-09;121 | |||
|ontology_enrichment_disease=DOID:2394!1.25e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.92e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.99e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!9.14e-34!69;UBERON:0002049!1.51e-33!79;UBERON:0007798!1.51e-33!79;UBERON:0004872!3.27e-31!84;UBERON:0001981!2.92e-30!60;UBERON:0007500!2.92e-30!60;UBERON:0004537!2.92e-30!60;UBERON:0006965!2.92e-30!60;UBERON:0003914!1.14e-29!118;UBERON:0001637!1.18e-25!42;UBERON:0003509!1.18e-25!42;UBERON:0004572!1.18e-25!42;UBERON:0004535!1.02e-24!110;UBERON:0001009!4.82e-23!113;UBERON:0000490!5.00e-21!138;UBERON:0004573!3.12e-20!33;UBERON:0004571!3.12e-20!33;UBERON:0000486!2.21e-18!82;UBERON:0004290!7.85e-18!70;UBERON:0005256!3.88e-17!143;UBERON:0001134!2.01e-16!61;UBERON:0002036!2.01e-16!61;UBERON:0003082!2.01e-16!61;UBERON:0000914!7.18e-16!83;UBERON:0002329!7.18e-16!83;UBERON:0003077!7.18e-16!83;UBERON:0003059!7.18e-16!83;UBERON:0007282!7.18e-16!83;UBERON:0009618!7.18e-16!83;UBERON:0007285!7.18e-16!83;UBERON:0002385!9.73e-16!63;UBERON:0001015!9.73e-16!63;UBERON:0000383!9.73e-16!63;UBERON:0002100!2.08e-14!216;UBERON:0004111!6.41e-12!241;UBERON:0000119!1.06e-11!312;UBERON:0000947!1.27e-11!21;UBERON:0010191!1.27e-11!21;UBERON:0000483!1.77e-11!309;UBERON:0000487!1.76e-10!22;UBERON:0001986!5.55e-10!18;UBERON:0004638!5.55e-10!18;UBERON:0004852!5.55e-10!18;UBERON:0000025!5.60e-10!194;UBERON:0000477!7.81e-10!286;UBERON:0006914!1.78e-09!25;UBERON:0000926!2.02e-09!448;UBERON:0004120!2.02e-09!448;UBERON:0006603!2.02e-09!448;UBERON:0000468!1.04e-08!659;UBERON:0000467!1.29e-08!625;UBERON:0000480!1.81e-08!626;UBERON:0003081!2.93e-08!216;UBERON:0000475!5.22e-08!365;UBERON:0003104!1.58e-07!238;UBERON:0009142!1.58e-07!238;UBERON:0003915!7.94e-07!9;UBERON:0004700!7.94e-07!9;UBERON:0001917!7.94e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.52e-24;33!UBERON:0004571;1.52e-24;33!UBERON:0001637;1.54e-24;42!UBERON:0003509;1.54e-24;42!UBERON:0004572;1.54e-24;42!UBERON:0007500;2.46e-21;56!UBERON:0001981;2.46e-21;56!UBERON:0004537;2.46e-21;56!UBERON:0000055;8.90e-21;65!UBERON:0002049;3.50e-16;75!UBERON:0007798;3.50e-16;75!UBERON:0000947;4.99e-15;21!UBERON:0010191;4.99e-15;21!UBERON:0003914;3.59e-13;74!UBERON:0000487;1.66e-12;22!UBERON:0004638;2.35e-11;18!UBERON:0001986;2.35e-11;18!UBERON:0004852;2.35e-11;18!UBERON:0006914;3.10e-10;25!UBERON:0004535;3.50e-09;109!UBERON:0003915;5.01e-09;9!UBERON:0004700;5.01e-09;9!UBERON:0001917;5.01e-09;9!UBERON:0000025;6.18e-09;93!UBERON:0001009;6.58e-09;112!UBERON:0004237;3.99e-08;10!UBERON:0004695;3.99e-08;10!UBERON:0002111;3.99e-08;10!UBERON:0004178;3.99e-08;10!UBERON:0000490;9.52e-08;33!UBERON:0001473;2.12e-07;8!UBERON:0004536;2.12e-07;8!UBERON:0006558;2.12e-07;8!UBERON:0003688;9.79e-07;6!UBERON:0002358;9.79e-07;6!UBERON:0003684;9.79e-07;6!UBERON:0001178;9.79e-07;6!UBERON:0003834;9.96e-07;5!UBERON:0001533;9.96e-07;5 | |||
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| ||
|short_description=p8@SERPINE1 | |||
}} | }} |
Latest revision as of 15:34, 24 September 2015
Short description: | p8@SERPINE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SERPINE1_5end |
Coexpression cluster: | C301_Smooth_mesenchymal_Endothelial_Hepatic_basal_hepatic_chorionic |
Association with transcript: | 33bp_to_uc003uxs.2_5end |
EntrezGene: | SERPINE1 |
HGNC: | 8583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.90e-31 | 121 |
vascular associated smooth muscle cell | 2.12e-25 | 32 |
smooth muscle cell | 1.69e-21 | 43 |
smooth muscle myoblast | 1.69e-21 | 43 |
muscle precursor cell | 1.38e-18 | 58 |
myoblast | 1.38e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.38e-18 | 58 |
muscle cell | 7.72e-18 | 55 |
endothelial cell of vascular tree | 1.90e-15 | 24 |
electrically responsive cell | 9.68e-15 | 61 |
electrically active cell | 9.68e-15 | 61 |
endothelial cell | 1.49e-14 | 36 |
lining cell | 4.63e-14 | 58 |
barrier cell | 4.63e-14 | 58 |
embryonic cell | 2.07e-13 | 250 |
multi fate stem cell | 6.33e-12 | 427 |
fibroblast | 7.82e-12 | 76 |
blood vessel endothelial cell | 2.71e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.71e-11 | 18 |
somatic stem cell | 3.23e-11 | 433 |
meso-epithelial cell | 1.05e-10 | 45 |
stem cell | 2.56e-10 | 441 |
endothelial cell of artery | 5.73e-09 | 9 |
cardiocyte | 1.53e-08 | 16 |
aortic smooth muscle cell | 3.94e-08 | 10 |
smooth muscle cell of the subclavian artery | 9.86e-07 | 5 |
Ontology term | p-value | n |
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