FFCP PHASE1:Hg19::chr19:6591173..6591184,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=970 | |EntrezGene=970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11937 | |HGNC=11937 | ||
|TSSclassifier=strong | |||
|UniProt=P32970,Q53XX4 | |UniProt=P32970,Q53XX4 | ||
|association_with_transcript=-10bp_to_ENST00000245903,NM_001252,uc002mfi.2,uc010xjf.1_5end | |association_with_transcript=-10bp_to_ENST00000245903,NM_001252,uc002mfi.2,uc010xjf.1_5end | ||
|cluster_id=chr19:6591173..6591184,- | |||
|coexpression_cluster_id=C1828 | |||
|description=CAGE_peak_7_at_CD70_5end | |description=CAGE_peak_7_at_CD70_5end | ||
|id=chr19:6591173..6591184,- | |id=chr19:6591173..6591184,- | ||
|ontology_enrichment_celltype=CL:1000497!2.62e-13!18;CL:0002518!2.62e-13!18;CL:1000449!4.32e-11!16;CL:1000507!5.65e-11!12;CL:1000494!5.65e-11!12;CL:0002681!3.71e-08!13;CL:0002584!3.71e-08!13;CL:0000066!2.77e-07!254 | |ontology_enrichment_celltype=CL:1000497!2.62e-13!18;CL:0002518!2.62e-13!18;CL:1000449!4.32e-11!16;CL:1000507!5.65e-11!12;CL:1000494!5.65e-11!12;CL:0002681!3.71e-08!13;CL:0002584!3.71e-08!13;CL:0000066!2.77e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:1000497;3.59e-11;17!CL:0002518;3.59e-11;17!CL:1000449;6.31e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,9.98e-12,17;CL:0002518,9.98e-12,17;CL:1000449,3.18e-08,15;CL:1000507,6.99e-07,10;CL:1000494,6.99e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.75e-10;29 | |||
|ontology_enrichment_disease=DOID:14566!2.37e-17!239;DOID:162!1.22e-16!235;DOID:305!1.51e-09!106;DOID:0050686!1.62e-09!137;DOID:0050687!8.95e-09!143;DOID:0060058!3.00e-07!10 | |ontology_enrichment_disease=DOID:14566!2.37e-17!239;DOID:162!1.22e-16!235;DOID:305!1.51e-09!106;DOID:0050686!1.62e-09!137;DOID:0050687!8.95e-09!143;DOID:0060058!3.00e-07!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.02e-11,239;DOID:162,2.95e-10,235 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.14e-13!9;UBERON:0002113!1.31e-12!27;UBERON:0003918!1.31e-12!27;UBERON:0005095!1.31e-12!27;UBERON:0007687!1.31e-12!27;UBERON:0004211!4.32e-11!16;UBERON:0001285!4.32e-11!16;UBERON:0007684!4.32e-11!16;UBERON:0003220!4.32e-11!16;UBERON:0004208!4.32e-11!16;UBERON:0009773!5.65e-11!12;UBERON:0001231!5.65e-11!12;UBERON:0004810!5.65e-11!12;UBERON:0000489!9.65e-11!32;UBERON:0006555!3.23e-10!17;UBERON:0005103!3.23e-10!17;UBERON:0000083!3.23e-10!17;UBERON:0009201!3.23e-10!17;UBERON:0004819!3.23e-10!17;UBERON:0006553!3.23e-10!17;UBERON:0003074!3.23e-10!17;UBERON:0003060!3.23e-10!17;UBERON:0000080!1.92e-09!18;UBERON:0002120!1.92e-09!18;UBERON:0004875!1.92e-09!18;UBERON:0005721!1.92e-09!18;UBERON:0005754!1.92e-09!18;UBERON:0007297!1.92e-09!18;UBERON:0001851!3.66e-09!16;UBERON:0003887!4.00e-09!21;UBERON:0001225!3.71e-08!13;UBERON:0008987!3.71e-08!13;UBERON:0004876!3.87e-08!20;UBERON:0006554!5.50e-08!44;UBERON:0000058!9.15e-08!26;UBERON:0005172!1.12e-07!55;UBERON:0005173!1.12e-07!55;UBERON:0001008!1.12e-07!45;UBERON:0005177!2.14e-07!107;UBERON:0001557!2.68e-07!19;UBERON:0000353!6.04e-07!17;UBERON:0008947!7.00e-07!38;UBERON:0003258!7.00e-07!38 | |ontology_enrichment_uberon=UBERON:0001737!1.14e-13!9;UBERON:0002113!1.31e-12!27;UBERON:0003918!1.31e-12!27;UBERON:0005095!1.31e-12!27;UBERON:0007687!1.31e-12!27;UBERON:0004211!4.32e-11!16;UBERON:0001285!4.32e-11!16;UBERON:0007684!4.32e-11!16;UBERON:0003220!4.32e-11!16;UBERON:0004208!4.32e-11!16;UBERON:0009773!5.65e-11!12;UBERON:0001231!5.65e-11!12;UBERON:0004810!5.65e-11!12;UBERON:0000489!9.65e-11!32;UBERON:0006555!3.23e-10!17;UBERON:0005103!3.23e-10!17;UBERON:0000083!3.23e-10!17;UBERON:0009201!3.23e-10!17;UBERON:0004819!3.23e-10!17;UBERON:0006553!3.23e-10!17;UBERON:0003074!3.23e-10!17;UBERON:0003060!3.23e-10!17;UBERON:0000080!1.92e-09!18;UBERON:0002120!1.92e-09!18;UBERON:0004875!1.92e-09!18;UBERON:0005721!1.92e-09!18;UBERON:0005754!1.92e-09!18;UBERON:0007297!1.92e-09!18;UBERON:0001851!3.66e-09!16;UBERON:0003887!4.00e-09!21;UBERON:0001225!3.71e-08!13;UBERON:0008987!3.71e-08!13;UBERON:0004876!3.87e-08!20;UBERON:0006554!5.50e-08!44;UBERON:0000058!9.15e-08!26;UBERON:0005172!1.12e-07!55;UBERON:0005173!1.12e-07!55;UBERON:0001008!1.12e-07!45;UBERON:0005177!2.14e-07!107;UBERON:0001557!2.68e-07!19;UBERON:0000353!6.04e-07!17;UBERON:0008947!7.00e-07!38;UBERON:0003258!7.00e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.36e-26;9!UBERON:0001557;2.36e-26;9!UBERON:0002113;3.98e-11;24!UBERON:0011143;3.98e-11;24!UBERON:0000489;8.24e-09;29!UBERON:0006554;1.93e-08;30!UBERON:0001008;1.93e-08;30!UBERON:0000072;3.91e-08;37!UBERON:0006555;6.31e-08;15!UBERON:0004819;6.31e-08;15!UBERON:0001285;6.31e-08;15!UBERON:0007684;6.31e-08;15!UBERON:0000065;4.68e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.33e-26,9;UBERON:0001557,1.98e-11,19;UBERON:0002113,1.28e-10,26;UBERON:0003918,1.28e-10,26;UBERON:0011143,1.28e-10,26;UBERON:0005095,1.28e-10,26;UBERON:0007687,1.28e-10,26;UBERON:0000489,1.59e-08,31;UBERON:0008947,1.63e-08,38;UBERON:0003258,1.63e-08,38;UBERON:0004211,3.18e-08,15;UBERON:0009773,3.18e-08,15;UBERON:0001231,3.18e-08,15;UBERON:0001285,3.18e-08,15;UBERON:0007684,3.18e-08,15;UBERON:0004208,3.18e-08,15;UBERON:0006555,1.22e-07,16;UBERON:0004819,1.22e-07,16;UBERON:0004810,6.99e-07,10 | |||
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|short_description=p7@CD70 | |short_description=p7@CD70 | ||
}} | }} |
Latest revision as of 17:20, 24 September 2015
Short description: | p7@CD70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CD70_5end |
Coexpression cluster: | C1828_epithelioid_lymphangiectasia_cord_meningioma_adult_renal_serous |
Association with transcript: | -10bp_to_ENST00000245903, NM_001252, uc002mfi.2, uc010xjf.1_5end |
EntrezGene: | CD70 |
HGNC: | 11937 |
UniProt: | P32970Q53XX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 9.98e-12 | 17 |
kidney epithelial cell | 9.98e-12 | 17 |
epithelial cell of nephron | 3.18e-08 | 15 |
kidney tubule cell | 6.99e-07 | 10 |
nephron tubule epithelial cell | 6.99e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.33e-26 | 9 |
upper respiratory tract | 1.98e-11 | 19 |
kidney | 1.28e-10 | 26 |
kidney mesenchyme | 1.28e-10 | 26 |
upper urinary tract | 1.28e-10 | 26 |
kidney rudiment | 1.28e-10 | 26 |
kidney field | 1.28e-10 | 26 |
cavitated compound organ | 1.59e-08 | 31 |
respiratory primordium | 1.63e-08 | 38 |
endoderm of foregut | 1.63e-08 | 38 |
nephron epithelium | 3.18e-08 | 15 |
renal tubule | 3.18e-08 | 15 |
nephron tubule | 3.18e-08 | 15 |
nephron | 3.18e-08 | 15 |
uriniferous tubule | 3.18e-08 | 15 |
nephrogenic mesenchyme | 3.18e-08 | 15 |
excretory tube | 1.22e-07 | 16 |
kidney epithelium | 1.22e-07 | 16 |
nephron tubule epithelium | 6.99e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.02e-11 | 239 |
cancer | 2.95e-10 | 235 |