FFCP PHASE1:Hg19::chr6:1312325..1312340,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:1312325..1312340,+ to FFCP PHASE1:Hg19::chr6:1312325..1312340,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=94234 | |EntrezGene=94234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20951 | |HGNC=20951 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C009 | |UniProt=Q9C009 | ||
|association_with_transcript=-334bp_to_ENST00000296839,NM_033260,uc003mtl.3_5end | |||
|cluster_id=chr6:1312325..1312340,+ | |||
|description=CAGE_peak_1_at_FOXQ1_5end | |||
|id=chr6:1312325..1312340,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.25e-13!254;CL:0000223!1.14e-12!59;CL:0002076!5.48e-12!43;CL:0002251!7.50e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.99e-10;42!CL:0002251;9.28e-10;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,9.06e-15,58;CL:0002076,8.86e-14,42;CL:0000066,3.74e-13,253;CL:0002251,8.18e-10,20 | |||
|ontology_enrichment_development_v019=UBERON:0006595;7.11e-09;86!CL:0000223;9.27e-08;58!UBERON:0009497;2.73e-07;13!UBERON:0008947;5.93e-07;29 | |||
|ontology_enrichment_disease=DOID:305!4.23e-14!106;DOID:0050687!7.18e-08!143;DOID:1749!5.34e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.53e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.49e-14,106;DOID:0050687,1.42e-07,143;DOID:1749,2.51e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.07e-29!169;UBERON:0000925!9.07e-29!169;UBERON:0006595!9.07e-29!169;UBERON:0001007!1.40e-26!155;UBERON:0001555!1.40e-26!155;UBERON:0007026!1.40e-26!155;UBERON:0000481!2.79e-25!347;UBERON:0000077!3.90e-20!130;UBERON:0004921!7.41e-20!129;UBERON:0004185!7.41e-20!129;UBERON:0000062!2.60e-19!511;UBERON:0000475!5.07e-19!365;UBERON:0001004!1.31e-16!72;UBERON:0000922!8.38e-16!612;UBERON:0000468!2.75e-15!659;UBERON:0001041!7.20e-15!98;UBERON:0003104!2.95e-14!238;UBERON:0009142!2.95e-14!238;UBERON:0002050!3.53e-14!605;UBERON:0005423!3.53e-14!605;UBERON:0000153!5.79e-14!129;UBERON:0007811!5.79e-14!129;UBERON:0000923!5.87e-14!604;UBERON:0005291!5.87e-14!604;UBERON:0006598!5.87e-14!604;UBERON:0002532!5.87e-14!604;UBERON:0000033!7.60e-14!123;UBERON:0000467!3.97e-13!625;UBERON:0000480!6.69e-13!626;UBERON:0000064!2.23e-12!219;UBERON:0000161!3.61e-11!35;UBERON:0000065!2.24e-10!53;UBERON:0005911!2.79e-10!82;UBERON:0000165!5.42e-10!28;UBERON:0000930!5.42e-10!28;UBERON:0001444!9.77e-10!48;UBERON:0008947!1.18e-09!38;UBERON:0003258!1.18e-09!38;UBERON:0000477!4.95e-09!286;UBERON:0000166!5.35e-09!21;UBERON:0003102!1.21e-08!95;UBERON:0000072!2.79e-08!46;UBERON:0004121!4.01e-08!169;UBERON:0000924!6.02e-08!173;UBERON:0006601!6.02e-08!173;UBERON:0005177!1.17e-07!107;UBERON:0007023!2.71e-07!115;UBERON:0000466!3.18e-07!126;UBERON:0000063!4.91e-07!97;UBERON:0001049!7.15e-07!57;UBERON:0005068!7.15e-07!57;UBERON:0006241!7.15e-07!57;UBERON:0007135!7.15e-07!57;UBERON:0000119!7.97e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;5.47e-11;28!UBERON:0000161;5.96e-09;19!UBERON:0000166;5.96e-09;19!UBERON:0001555;2.43e-08;54!UBERON:0001004;2.89e-08;65!UBERON:0004921;3.63e-08;33!UBERON:0000065;6.56e-08;44!UBERON:0007811;1.66e-07;52!UBERON:0001041;2.36e-07;14!UBERON:0000344;2.77e-07;20!UBERON:0000033;4.38e-07;50!UBERON:0000153;6.82e-07;54 | |||
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| ||
|short_description=p1@FOXQ1 | |||
}} | }} |
Latest revision as of 17:52, 24 September 2015
Short description: | p1@FOXQ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXQ1_5end |
Coexpression cluster: | NA |
Association with transcript: | -334bp_to_ENST00000296839, NM_033260, uc003mtl.3_5end |
EntrezGene: | FOXQ1 |
HGNC: | 20951 |
UniProt: | Q9C009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 9.06e-15 | 58 |
endo-epithelial cell | 8.86e-14 | 42 |
epithelial cell | 3.74e-13 | 253 |
epithelial cell of alimentary canal | 8.18e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.49e-14 | 106 |
cell type cancer | 1.42e-07 | 143 |
squamous cell carcinoma | 2.51e-07 | 14 |