FFCP PHASE1:Hg19::chr3:130613376..130613437,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27032 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13211 | |||
|TSSclassifier=strong | |||
|UniProt=P98194 | |||
|association_with_transcript=0bp_to_ENST00000428331,NM_001001486,NM_001001487,uc003eno.2,uc003enp.2,uc003enq.2,uc003enr.2,uc003ens.2,uc003ent.2_5end | |||
|cluster_id=chr3:130613376..130613437,+ | |||
|description=CAGE_peak_6_at_ATP2C1_5end | |||
|id=chr3:130613376..130613437,+ | |||
|ontology_enrichment_celltype=CL:0000192!5.31e-15!42;CL:0000514!5.31e-15!42;CL:0000359!6.03e-15!32;CL:0000055!3.00e-14!180;CL:0000393!8.34e-13!60;CL:0000211!8.34e-13!60;CL:0000187!1.49e-12!54;CL:0000680!7.27e-12!57;CL:0000056!7.27e-12!57;CL:0000355!7.27e-12!57;CL:0000183!1.66e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.60e-16;32!CL:0000192;1.19e-11;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.50e-17,32;CL:0000192,2.88e-16,43;CL:0000514,2.88e-16,43;CL:0000187,4.09e-12,55;CL:0000393,1.43e-11,61;CL:0000211,1.43e-11,61;CL:0000680,3.07e-11,58;CL:0000056,3.07e-11,58;CL:0000355,3.07e-11,58;CL:0000057,6.53e-07,76;CL:0002494,8.15e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.19e-11;43 | |||
|ontology_enrichment_disease=DOID:2394!1.13e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.96e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.20e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!8.39e-12!42;UBERON:0003509!8.39e-12!42;UBERON:0004572!8.39e-12!42;UBERON:0001017!4.63e-11!82;UBERON:0000073!2.11e-10!94;UBERON:0001016!2.11e-10!94;UBERON:0000914!2.15e-10!83;UBERON:0002329!2.15e-10!83;UBERON:0003077!2.15e-10!83;UBERON:0003059!2.15e-10!83;UBERON:0007282!2.15e-10!83;UBERON:0009618!2.15e-10!83;UBERON:0007285!2.15e-10!83;UBERON:0001134!5.43e-10!61;UBERON:0002036!5.43e-10!61;UBERON:0003082!5.43e-10!61;UBERON:0004573!7.93e-10!33;UBERON:0004571!7.93e-10!33;UBERON:0000955!9.00e-10!69;UBERON:0006238!9.00e-10!69;UBERON:0005743!1.02e-09!86;UBERON:0002385!2.21e-09!63;UBERON:0001015!2.21e-09!63;UBERON:0000383!2.21e-09!63;UBERON:0004290!2.23e-09!70;UBERON:0000025!1.07e-08!194;UBERON:0004872!2.23e-08!84;UBERON:0002616!3.63e-08!59;UBERON:0001049!9.37e-08!57;UBERON:0005068!9.37e-08!57;UBERON:0006241!9.37e-08!57;UBERON:0007135!9.37e-08!57;UBERON:0001981!1.04e-07!60;UBERON:0007500!1.04e-07!60;UBERON:0004537!1.04e-07!60;UBERON:0006965!1.04e-07!60;UBERON:0001869!2.31e-07!32;UBERON:0000486!2.47e-07!82;UBERON:0000483!3.57e-07!309;UBERON:0000475!3.59e-07!365;UBERON:0002020!3.71e-07!34;UBERON:0003528!3.71e-07!34;UBERON:0001893!4.16e-07!34;UBERON:0000033!4.76e-07!123;UBERON:0002780!4.82e-07!41;UBERON:0001890!4.82e-07!41;UBERON:0006240!4.82e-07!41;UBERON:0002346!4.98e-07!90;UBERON:0002791!6.68e-07!33;UBERON:0000924!6.89e-07!173;UBERON:0006601!6.89e-07!173;UBERON:0003075!7.09e-07!86;UBERON:0007284!7.09e-07!86;UBERON:0000119!8.40e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.09e-10;42!UBERON:0003509;3.09e-10;42!UBERON:0004572;3.09e-10;42!UBERON:0004573;5.06e-10;33!UBERON:0004571;5.06e-10;33!UBERON:0001869;1.20e-07;32!UBERON:0003528;2.93e-07;34!UBERON:0002020;2.93e-07;34!UBERON:0002791;5.72e-07;32!UBERON:0001893;9.10e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.47e-13,42;UBERON:0003509,1.47e-13,42;UBERON:0004572,1.47e-13,42;UBERON:0010314,4.89e-12,132;UBERON:0001016,5.61e-12,89;UBERON:0000025,1.08e-11,192;UBERON:0004573,3.98e-11,33;UBERON:0004571,3.98e-11,33;UBERON:0001017,4.13e-11,81;UBERON:0000955,1.51e-10,68;UBERON:0006238,1.51e-10,68;UBERON:0004872,3.51e-10,83;UBERON:0007524,3.73e-10,73;UBERON:0001134,5.14e-10,62;UBERON:0002036,5.14e-10,62;UBERON:0003082,5.14e-10,62;UBERON:0003077,8.33e-10,72;UBERON:0007285,8.33e-10,72;UBERON:0002329,1.35e-09,71;UBERON:0003059,1.35e-09,71;UBERON:0007282,1.35e-09,71;UBERON:0004290,1.35e-09,71;UBERON:0009618,1.35e-09,71;UBERON:0002385,3.42e-09,64;UBERON:0001015,3.42e-09,64;UBERON:0000383,3.42e-09,64;UBERON:0003075,8.13e-09,82;UBERON:0007284,8.13e-09,82;UBERON:0002346,8.47e-09,86;UBERON:0007500,9.65e-09,59;UBERON:0001981,9.65e-09,59;UBERON:0004537,9.65e-09,59;UBERON:0006965,9.65e-09,59;UBERON:0001049,1.01e-08,56;UBERON:0005068,1.01e-08,56;UBERON:0006241,1.01e-08,56;UBERON:0007135,1.01e-08,56;UBERON:0004111,1.85e-08,240;UBERON:0000073,1.90e-08,53;UBERON:0002616,1.90e-08,53;UBERON:0000483,2.94e-08,306;UBERON:0007503,4.49e-08,78;UBERON:0001869,5.59e-08,32;UBERON:0000119,8.47e-08,309;UBERON:0003528,1.41e-07,34;UBERON:0002020,1.41e-07,34;UBERON:0002780,1.56e-07,41;UBERON:0001890,1.56e-07,41;UBERON:0003080,1.56e-07,41;UBERON:0006240,1.56e-07,41;UBERON:0001893,1.60e-07,34;UBERON:0002791,3.26e-07,32;UBERON:0002049,6.09e-07,78;UBERON:0007798,6.09e-07,78 | |||
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| |||
|short_description=p6@ATP2C1 | |||
}} |
Latest revision as of 19:11, 24 September 2015
Short description: | p6@ATP2C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ATP2C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000428331, NM_001001486, NM_001001487, uc003eno.2, uc003enp.2, uc003enq.2, uc003enr.2, uc003ens.2, uc003ent.2_5end |
EntrezGene: | ATP2C1 |
HGNC: | 13211 |
UniProt: | P98194 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.50e-17 | 32 |
smooth muscle cell | 2.88e-16 | 43 |
smooth muscle myoblast | 2.88e-16 | 43 |
muscle cell | 4.09e-12 | 55 |
electrically responsive cell | 1.43e-11 | 61 |
electrically active cell | 1.43e-11 | 61 |
muscle precursor cell | 3.07e-11 | 58 |
myoblast | 3.07e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.07e-11 | 58 |
fibroblast | 6.53e-07 | 76 |
cardiocyte | 8.15e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.20e-08 | 14 |