FFCP PHASE1:Hg19::chr11:10476786..10476831,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=272 | |EntrezGene=272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=470 | |HGNC=470 | ||
|TSSclassifier=strong | |||
|UniProt=Q01432 | |UniProt=Q01432 | ||
|association_with_transcript=-35bp_to_ENST00000396553_5end | |association_with_transcript=-35bp_to_ENST00000396553_5end | ||
|cluster_id=chr11:10476786..10476831,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_1_at_AMPD3_5end | |description=CAGE_peak_1_at_AMPD3_5end | ||
|id=chr11:10476786..10476831,+ | |id=chr11:10476786..10476831,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.35e-23!42;CL:0000738!3.27e-21!140;CL:0002009!8.63e-21!65;CL:0000766!1.23e-20!76;CL:0000860!1.70e-20!45;CL:0002194!3.76e-20!63;CL:0000576!3.76e-20!63;CL:0000040!3.76e-20!63;CL:0000559!3.76e-20!63;CL:0002087!2.35e-18!119;CL:0000557!1.95e-16!71;CL:0000839!3.43e-15!70;CL:0002031!1.57e-14!124;CL:0000723!8.09e-14!436;CL:0000048!2.12e-13!430;CL:0000034!9.22e-13!444;CL:0002371!8.14e-12!591;CL:0000037!3.27e-11!172;CL:0000566!3.27e-11!172;CL:0000988!7.13e-11!182;CL:0002032!9.46e-11!165;CL:0000837!9.46e-11!165;CL:0000359!9.59e-11!32;CL:0000763!7.98e-10!112;CL:0000049!7.98e-10!112;CL:0000144!1.03e-09!625;CL:0000192!6.51e-09!42;CL:0000514!6.51e-09!42;CL:0000945!1.45e-08!24;CL:0000826!1.45e-08!24;CL:0002320!6.10e-08!365;CL:0000134!7.10e-08!358;CL:0000680!1.03e-07!57;CL:0000056!1.03e-07!57;CL:0000355!1.03e-07!57;CL:0000187!6.24e-07!54 | |ontology_enrichment_celltype=CL:0002057!2.35e-23!42;CL:0000738!3.27e-21!140;CL:0002009!8.63e-21!65;CL:0000766!1.23e-20!76;CL:0000860!1.70e-20!45;CL:0002194!3.76e-20!63;CL:0000576!3.76e-20!63;CL:0000040!3.76e-20!63;CL:0000559!3.76e-20!63;CL:0002087!2.35e-18!119;CL:0000557!1.95e-16!71;CL:0000839!3.43e-15!70;CL:0002031!1.57e-14!124;CL:0000723!8.09e-14!436;CL:0000048!2.12e-13!430;CL:0000034!9.22e-13!444;CL:0002371!8.14e-12!591;CL:0000037!3.27e-11!172;CL:0000566!3.27e-11!172;CL:0000988!7.13e-11!182;CL:0002032!9.46e-11!165;CL:0000837!9.46e-11!165;CL:0000359!9.59e-11!32;CL:0000763!7.98e-10!112;CL:0000049!7.98e-10!112;CL:0000144!1.03e-09!625;CL:0000192!6.51e-09!42;CL:0000514!6.51e-09!42;CL:0000945!1.45e-08!24;CL:0000826!1.45e-08!24;CL:0002320!6.10e-08!365;CL:0000134!7.10e-08!358;CL:0000680!1.03e-07!57;CL:0000056!1.03e-07!57;CL:0000355!1.03e-07!57;CL:0000187!6.24e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.35e-25;33!CL:0002057;3.35e-25;33!CL:0000473;1.65e-24;39!CL:0000234;1.65e-24;39!CL:0000576;7.85e-15;48!CL:0000766;2.71e-13;69!CL:0000359;6.54e-11;32!CL:0000945;2.60e-10;24!CL:0002539;3.97e-08;10!CL:0002087;4.59e-08;104!CL:0000094;8.93e-08;8!CL:0000738;2.78e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.05e-34,48;CL:0000234,8.05e-34,48;CL:0000738,8.67e-30,136;CL:0000860,2.28e-29,42;CL:0002057,2.28e-29,42;CL:0000766,9.61e-28,72;CL:0002009,2.79e-26,61;CL:0002194,2.11e-25,59;CL:0000576,2.11e-25,59;CL:0000040,2.11e-25,59;CL:0000559,2.11e-25,59;CL:0002087,7.32e-25,115;CL:0000557,3.65e-22,67;CL:0002031,1.29e-21,120;CL:0000839,1.06e-20,66;CL:0000037,4.15e-18,168;CL:0002032,1.68e-17,161;CL:0000837,1.68e-17,161;CL:0000988,1.90e-17,177;CL:0000723,1.90e-17,433;CL:0000034,8.54e-17,441;CL:0000048,1.33e-16,427;CL:0000763,3.01e-15,108;CL:0000049,3.01e-15,108;CL:0000359,1.32e-11,32;CL:0000134,4.19e-11,354;CL:0002320,1.83e-10,361;CL:0000945,2.78e-10,24;CL:0000826,2.78e-10,24;CL:0002539,3.88e-08,10;CL:0000219,8.71e-08,386;CL:0000094,9.24e-08,8;CL:0000192,4.72e-07,43;CL:0000514,4.72e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-21;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;4.90e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.93e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!2.34e-20!167;UBERON:0002390!1.44e-14!102;UBERON:0003061!1.44e-14!102;UBERON:0002193!5.29e-14!112;UBERON:0002371!1.93e-13!80;UBERON:0004765!5.26e-12!101;UBERON:0001434!5.26e-12!101;UBERON:0001474!8.70e-12!86;UBERON:0000486!1.03e-10!82;UBERON:0003081!1.16e-10!216;UBERON:0004290!4.21e-09!70;UBERON:0000914!4.30e-09!83;UBERON:0002329!4.30e-09!83;UBERON:0003077!4.30e-09!83;UBERON:0003059!4.30e-09!83;UBERON:0007282!4.30e-09!83;UBERON:0009618!4.30e-09!83;UBERON:0007285!4.30e-09!83;UBERON:0001134!2.89e-08!61;UBERON:0002036!2.89e-08!61;UBERON:0003082!2.89e-08!61;UBERON:0002405!3.70e-08!115;UBERON:0002385!8.98e-08!63;UBERON:0001015!8.98e-08!63;UBERON:0000383!8.98e-08!63;UBERON:0002384!1.38e-07!375;UBERON:0000926!2.01e-07!448;UBERON:0004120!2.01e-07!448;UBERON:0006603!2.01e-07!448 | |ontology_enrichment_uberon=UBERON:0002204!2.34e-20!167;UBERON:0002390!1.44e-14!102;UBERON:0003061!1.44e-14!102;UBERON:0002193!5.29e-14!112;UBERON:0002371!1.93e-13!80;UBERON:0004765!5.26e-12!101;UBERON:0001434!5.26e-12!101;UBERON:0001474!8.70e-12!86;UBERON:0000486!1.03e-10!82;UBERON:0003081!1.16e-10!216;UBERON:0004290!4.21e-09!70;UBERON:0000914!4.30e-09!83;UBERON:0002329!4.30e-09!83;UBERON:0003077!4.30e-09!83;UBERON:0003059!4.30e-09!83;UBERON:0007282!4.30e-09!83;UBERON:0009618!4.30e-09!83;UBERON:0007285!4.30e-09!83;UBERON:0001134!2.89e-08!61;UBERON:0002036!2.89e-08!61;UBERON:0003082!2.89e-08!61;UBERON:0002405!3.70e-08!115;UBERON:0002385!8.98e-08!63;UBERON:0001015!8.98e-08!63;UBERON:0000383!8.98e-08!63;UBERON:0002384!1.38e-07!375;UBERON:0000926!2.01e-07!448;UBERON:0004120!2.01e-07!448;UBERON:0006603!2.01e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;3.97e-08;10!UBERON:0004695;3.97e-08;10!UBERON:0002111;3.97e-08;10!UBERON:0004178;3.97e-08;10!UBERON:0004573;3.25e-07;33!UBERON:0004571;3.25e-07;33 | |||
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|short_description=p1@AMPD3 | |short_description=p1@AMPD3 | ||
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Latest revision as of 20:23, 24 September 2015
Short description: | p1@AMPD3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AMPD3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -35bp_to_ENST00000396553_5end |
EntrezGene: | AMPD3 |
HGNC: | 470 |
UniProt: | Q01432 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.01e-20 | 167 |
bone marrow | 2.86e-18 | 76 |
immune system | 1.27e-16 | 93 |
bone element | 1.80e-16 | 82 |
hematopoietic system | 2.45e-16 | 98 |
blood island | 2.45e-16 | 98 |
skeletal element | 5.89e-16 | 90 |
hemolymphoid system | 9.27e-16 | 108 |
lateral plate mesoderm | 3.92e-15 | 203 |
skeletal system | 1.15e-14 | 100 |
mesoderm | 4.95e-13 | 315 |
mesoderm-derived structure | 4.95e-13 | 315 |
presumptive mesoderm | 4.95e-13 | 315 |
connective tissue | 3.02e-10 | 371 |
multilaminar epithelium | 4.77e-09 | 83 |
blood vessel smooth muscle | 3.88e-08 | 10 |
arterial system smooth muscle | 3.88e-08 | 10 |
artery smooth muscle tissue | 3.88e-08 | 10 |
aorta smooth muscle tissue | 3.88e-08 | 10 |
systemic artery | 5.81e-08 | 33 |
systemic arterial system | 5.81e-08 | 33 |
artery | 8.04e-08 | 42 |
arterial blood vessel | 8.04e-08 | 42 |
arterial system | 8.04e-08 | 42 |
somite | 2.14e-07 | 71 |
presomitic mesoderm | 2.14e-07 | 71 |
presumptive segmental plate | 2.14e-07 | 71 |
dermomyotome | 2.14e-07 | 71 |
trunk paraxial mesoderm | 2.14e-07 | 71 |
paraxial mesoderm | 3.83e-07 | 72 |
presumptive paraxial mesoderm | 3.83e-07 | 72 |
dense mesenchyme tissue | 6.71e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.93e-08 | 14 |