FFCP PHASE1:Hg19::chr8:104512783..104512794,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9699 | |EntrezGene=9699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17283 | |HGNC=17283 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFB6,B3KX91,F8WD47,Q9UQ26 | |UniProt=E9PFB6,B3KX91,F8WD47,Q9UQ26 | ||
|association_with_transcript=-181bp_to_ENST00000504942,NM_001100117,uc003ylp.2_5end | |association_with_transcript=-181bp_to_ENST00000504942,NM_001100117,uc003ylp.2_5end | ||
|cluster_id=chr8:104512783..104512794,+ | |||
|description=CAGE_peak_19_at_RIMS2_5end | |description=CAGE_peak_19_at_RIMS2_5end | ||
|id=chr8:104512783..104512794,+ | |id=chr8:104512783..104512794,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.33e-43;3!UBERON:0006601;3.52e-08;82 | |||
|ontology_enrichment_disease=DOID:5409!7.15e-08!4;DOID:3905!3.98e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:154;2.40e-08;2!DOID:4236;2.40e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,3.08e-08,2;DOID:4236,3.08e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.69e-41!57;UBERON:0005068!1.69e-41!57;UBERON:0006241!1.69e-41!57;UBERON:0007135!1.69e-41!57;UBERON:0000073!1.13e-39!94;UBERON:0001016!1.13e-39!94;UBERON:0000955!3.77e-38!69;UBERON:0006238!3.77e-38!69;UBERON:0001017!6.37e-38!82;UBERON:0005743!1.72e-37!86;UBERON:0002616!2.78e-37!59;UBERON:0002780!1.60e-33!41;UBERON:0001890!1.60e-33!41;UBERON:0006240!1.60e-33!41;UBERON:0003080!1.59e-32!42;UBERON:0002020!1.39e-29!34;UBERON:0003528!1.39e-29!34;UBERON:0001869!7.15e-29!32;UBERON:0003075!9.46e-29!86;UBERON:0007284!9.46e-29!86;UBERON:0002346!6.23e-27!90;UBERON:0001893!8.51e-27!34;UBERON:0007023!1.71e-26!115;UBERON:0002791!3.14e-25!33;UBERON:0003056!2.81e-23!61;UBERON:0000956!3.37e-23!25;UBERON:0000203!3.37e-23!25;UBERON:0002619!1.80e-21!22;UBERON:0001950!2.67e-21!20;UBERON:0000033!7.10e-21!123;UBERON:0000153!2.47e-20!129;UBERON:0007811!2.47e-20!129;UBERON:0004121!9.91e-19!169;UBERON:0000924!5.72e-18!173;UBERON:0006601!5.72e-18!173;UBERON:0000200!1.92e-12!6;UBERON:0004733!3.12e-10!12;UBERON:0002028!3.12e-10!12;UBERON:0007277!3.12e-10!12;UBERON:0002021!5.43e-10!5;UBERON:0003076!5.65e-10!15;UBERON:0003057!5.65e-10!15;UBERON:0003296!6.85e-10!4;UBERON:0010133!6.85e-10!4;UBERON:0000025!1.84e-09!194;UBERON:0004732!2.58e-09!13;UBERON:0002680!3.16e-08!9;UBERON:0001895!3.16e-08!9;UBERON:0010092!3.16e-08!9;UBERON:0001894!3.61e-08!7;UBERON:0006222!3.61e-08!7;UBERON:0002308!7.98e-08!9;UBERON:0000125!7.98e-08!9;UBERON:0004111!2.06e-07!241;UBERON:0000064!2.49e-07!219;UBERON:0001872!3.46e-07!5;UBERON:0002771!5.19e-07!3;UBERON:0000483!6.76e-07!309 | |ontology_enrichment_uberon=UBERON:0001049!1.69e-41!57;UBERON:0005068!1.69e-41!57;UBERON:0006241!1.69e-41!57;UBERON:0007135!1.69e-41!57;UBERON:0000073!1.13e-39!94;UBERON:0001016!1.13e-39!94;UBERON:0000955!3.77e-38!69;UBERON:0006238!3.77e-38!69;UBERON:0001017!6.37e-38!82;UBERON:0005743!1.72e-37!86;UBERON:0002616!2.78e-37!59;UBERON:0002780!1.60e-33!41;UBERON:0001890!1.60e-33!41;UBERON:0006240!1.60e-33!41;UBERON:0003080!1.59e-32!42;UBERON:0002020!1.39e-29!34;UBERON:0003528!1.39e-29!34;UBERON:0001869!7.15e-29!32;UBERON:0003075!9.46e-29!86;UBERON:0007284!9.46e-29!86;UBERON:0002346!6.23e-27!90;UBERON:0001893!8.51e-27!34;UBERON:0007023!1.71e-26!115;UBERON:0002791!3.14e-25!33;UBERON:0003056!2.81e-23!61;UBERON:0000956!3.37e-23!25;UBERON:0000203!3.37e-23!25;UBERON:0002619!1.80e-21!22;UBERON:0001950!2.67e-21!20;UBERON:0000033!7.10e-21!123;UBERON:0000153!2.47e-20!129;UBERON:0007811!2.47e-20!129;UBERON:0004121!9.91e-19!169;UBERON:0000924!5.72e-18!173;UBERON:0006601!5.72e-18!173;UBERON:0000200!1.92e-12!6;UBERON:0004733!3.12e-10!12;UBERON:0002028!3.12e-10!12;UBERON:0007277!3.12e-10!12;UBERON:0002021!5.43e-10!5;UBERON:0003076!5.65e-10!15;UBERON:0003057!5.65e-10!15;UBERON:0003296!6.85e-10!4;UBERON:0010133!6.85e-10!4;UBERON:0000025!1.84e-09!194;UBERON:0004732!2.58e-09!13;UBERON:0002680!3.16e-08!9;UBERON:0001895!3.16e-08!9;UBERON:0010092!3.16e-08!9;UBERON:0001894!3.61e-08!7;UBERON:0006222!3.61e-08!7;UBERON:0002308!7.98e-08!9;UBERON:0000125!7.98e-08!9;UBERON:0004111!2.06e-07!241;UBERON:0000064!2.49e-07!219;UBERON:0001872!3.46e-07!5;UBERON:0002771!5.19e-07!3;UBERON:0000483!6.76e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;9.19e-57;4!UBERON:0010133;9.19e-57;4!UBERON:0001894;1.14e-32;7!UBERON:0000007;1.07e-29;2!UBERON:0001905;6.05e-29;2!UBERON:0002757;6.05e-29;2!UBERON:0010134;6.05e-29;2!UBERON:0005408;6.05e-29;2!UBERON:0001899;6.05e-29;2!UBERON:0002037;3.39e-22;6!UBERON:0002680;5.03e-15;9!UBERON:0001895;5.03e-15;9!UBERON:0002784;5.24e-15;4!UBERON:0000073;1.83e-12;53!UBERON:0002616;1.83e-12;53!UBERON:0004733;2.01e-11;12!UBERON:0002028;2.01e-11;12!UBERON:0004732;1.37e-10;13!UBERON:0000955;1.50e-09;68!UBERON:0002780;2.01e-09;41!UBERON:0001890;2.01e-09;41!UBERON:0001017;1.30e-08;75!UBERON:0001016;1.77e-08;83!UBERON:0002360;2.40e-08;2!UBERON:0000094;2.40e-08;2!UBERON:0010743;2.40e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,4.48e-57,4;UBERON:0010133,4.48e-57,4;UBERON:0001894,7.58e-33,7;UBERON:0006222,7.58e-33,7;UBERON:0000007,1.24e-29,2;UBERON:0001905,2.56e-29,2;UBERON:0002757,2.56e-29,2;UBERON:0010134,2.56e-29,2;UBERON:0005408,2.56e-29,2;UBERON:0001899,2.56e-29,2;UBERON:0002037,3.27e-22,6;UBERON:0006215,3.27e-22,6;UBERON:0000073,1.65e-20,53;UBERON:0002616,1.65e-20,53;UBERON:0001049,2.18e-19,56;UBERON:0005068,2.18e-19,56;UBERON:0006241,2.18e-19,56;UBERON:0007135,2.18e-19,56;UBERON:0001017,4.02e-16,81;UBERON:0000955,1.24e-15,68;UBERON:0006238,1.24e-15,68;UBERON:0002784,3.42e-15,4;UBERON:0002680,4.91e-15,9;UBERON:0001895,4.91e-15,9;UBERON:0010092,4.91e-15,9;UBERON:0001016,1.91e-14,89;UBERON:0003075,4.75e-13,82;UBERON:0007284,4.75e-13,82;UBERON:0002346,2.08e-12,86;UBERON:0002780,6.30e-12,41;UBERON:0001890,6.30e-12,41;UBERON:0003080,6.30e-12,41;UBERON:0006240,6.30e-12,41;UBERON:0007023,1.86e-11,114;UBERON:0004733,1.98e-11,12;UBERON:0002028,1.98e-11,12;UBERON:0007277,1.98e-11,12;UBERON:0004732,1.35e-10,13;UBERON:0010371,3.99e-10,104;UBERON:0003076,2.95e-09,15;UBERON:0003057,2.95e-09,15;UBERON:0002360,2.67e-08,2;UBERON:0000094,2.67e-08,2;UBERON:0010743,2.67e-08,2;UBERON:0003056,5.52e-08,61;UBERON:0010314,8.59e-08,132;UBERON:0004121,4.05e-07,171;UBERON:0000924,4.05e-07,171;UBERON:0006601,4.05e-07,171;UBERON:0002368,8.40e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.600182192168805,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0.414644220061482,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0.969332746095218,0.74214478529481,0,0,0,0,0,0,0,0,0,1.04174996959975,0,0.482385754501632,1.52581736317083,5.41838373663001,3.25102380848902,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0.19566461893209,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0.176512253383001,0.225980740780532,0,0,0.379864775735272,0.195551382734803,0,0,0,0,0,2.23073497220554,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0,0,0,0.303747783290123,0,0,0,0.105600336519406,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.488105059607853,0.3755727921195,0,0.443716206147409,0.372578417648301,0.415045904808692,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0.655219697692825,0,0,0,0,0,0,0.368211900503681,0,0,0.639471856518258,0.107824811396682,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,0.321146125482298,1.41696576325585,0.319267718114302,0.82046545696302,0.252071696221718,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,1.56215619722769,0.620060389503552,0.507326481551255,0,0,0,0,0,1.60710550763486,1.68141861109412,2.42786241694653,2.04895972216168,0,0.115233987555779,0,0.0679697329768317,0.394636641377094,0.118193840883968,0,0.078493092850514,0.471346769748006,0,0,0,0,0.428859265059938,0.632054446930906,0,0,0,0,0,0,0.430227358820278,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0.118920090777569,0.11294608203896,0.219881033490858,1.20770274853339,0,0,2.82190377816914,0,0.235676547101626,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0.109265571963696,0,0.305966489225945,0,0.18378979906969,0.250707539292375,0.227336094654718,0.267964130156178,0,0.517164979309476,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0,0.325613074443898,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.600182192168805,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0.414644220061482,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0.969332746095218,0.74214478529481,0,0,0,0,0,0,0,0,0,1.04174996959975,0,0.482385754501632,1.52581736317083,5.41838373663001,3.25102380848902,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0.19566461893209,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0.176512253383001,0.225980740780532,0,0,0.379864775735272,0.195551382734803,0,0,0,0,0,2.23073497220554,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0,0,0,0.303747783290123,0,0,0,0.105600336519406,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.488105059607853,0.3755727921195,0,0.443716206147409,0.372578417648301,0.415045904808692,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0.655219697692825,0,0,0,0,0,0,0.368211900503681,0,0,0.639471856518258,0.107824811396682,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,0.321146125482298,1.41696576325585,0.319267718114302,0.82046545696302,0.252071696221718,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,1.56215619722769,0.620060389503552,0.507326481551255,0,0,0,0,0,1.60710550763486,1.68141861109412,2.42786241694653,2.04895972216168,0,0.115233987555779,0,0.0679697329768317,0.394636641377094,0.118193840883968,0,0.078493092850514,0.471346769748006,0,0,0,0,0.428859265059938,0.632054446930906,0,0,0,0,0,0,0.430227358820278,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0.118920090777569,0.11294608203896,0.219881033490858,1.20770274853339,0,0,2.82190377816914,0,0.235676547101626,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0.109265571963696,0,0.305966489225945,0,0.18378979906969,0.250707539292375,0.227336094654718,0.267964130156178,0,0.517164979309476,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0,0.325613074443898,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p19@RIMS2 | |short_description=p19@RIMS2 | ||
}} | }} |
Latest revision as of 00:46, 25 September 2015
Short description: | p19@RIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_RIMS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -181bp_to_ENST00000504942, NM_001100117, uc003ylp.2_5end |
EntrezGene: | RIMS2 |
HGNC: | 17283 |
UniProt: | E9PFB6B3KX91F8WD47Q9UQ26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 3.08e-08 | 2 |
carcinosarcoma | 3.08e-08 | 2 |