FFCP PHASE1:Hg19::chr12:87232534..87232541,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:87232534..87232541,-
|short_description=p10@MGAT4C
|description=CAGE_peak_10_at_MGAT4C_5end
|association_with_transcript=139bp_to_NM_013244,uc001taj.3,uc0...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25834 | |EntrezGene=25834 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=30871 | |HGNC=30871 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBM8 | |UniProt=Q9UBM8 | ||
|association_with_transcript=139bp_to_NM_013244,uc001taj.3,uc001tak.3,uc001tal.3_5end | |||
|cluster_id=chr12:87232534..87232541,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_10_at_MGAT4C_5end | |||
|id=chr12:87232534..87232541,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.07e-17;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.38e-68!34;UBERON:0003528!3.38e-68!34;UBERON:0001869!6.09e-66!32;UBERON:0001893!6.23e-62!34;UBERON:0002619!2.33e-61!22;UBERON:0001950!3.22e-59!20;UBERON:0002791!1.96e-57!33;UBERON:0001049!1.02e-56!57;UBERON:0005068!1.02e-56!57;UBERON:0006241!1.02e-56!57;UBERON:0007135!1.02e-56!57;UBERON:0001017!4.65e-56!82;UBERON:0000956!6.86e-54!25;UBERON:0000203!6.86e-54!25;UBERON:0005743!2.96e-53!86;UBERON:0002780!6.67e-51!41;UBERON:0001890!6.67e-51!41;UBERON:0006240!6.67e-51!41;UBERON:0002616!3.86e-50!59;UBERON:0003080!1.28e-49!42;UBERON:0000955!2.04e-49!69;UBERON:0006238!2.04e-49!69;UBERON:0000073!8.64e-48!94;UBERON:0001016!8.64e-48!94;UBERON:0003075!2.43e-39!86;UBERON:0007284!2.43e-39!86;UBERON:0002346!2.22e-37!90;UBERON:0003056!4.20e-33!61;UBERON:0007023!1.07e-30!115;UBERON:0002021!3.89e-29!5;UBERON:0001872!5.21e-29!5;UBERON:0000033!4.43e-28!123;UBERON:0000153!1.52e-26!129;UBERON:0007811!1.52e-26!129;UBERON:0004121!1.90e-26!169;UBERON:0000924!1.03e-25!173;UBERON:0006601!1.03e-25!173;UBERON:0000200!1.03e-15!6;UBERON:0002308!1.60e-15!9;UBERON:0000125!1.60e-15!9;UBERON:0000025!1.33e-14!194;UBERON:0002148!4.06e-12!2;UBERON:0009662!4.06e-12!2;UBERON:0001871!6.94e-12!7;UBERON:0002298!3.13e-11!8;UBERON:0004111!9.96e-11!241;UBERON:0000064!4.87e-10!219;UBERON:0000477!4.02e-09!286;UBERON:0003076!4.37e-09!15;UBERON:0003057!4.37e-09!15;UBERON:0000483!6.01e-09!309;UBERON:0002771!7.48e-09!3;UBERON:0000119!8.29e-09!312;UBERON:0000988!2.28e-08!3;UBERON:0006331!2.28e-08!3;UBERON:0000475!3.05e-08!365;UBERON:0001896!3.19e-08!3;UBERON:0005290!3.19e-08!3;UBERON:0010096!3.19e-08!3;UBERON:0009663!7.16e-08!7;UBERON:0004733!1.57e-07!12;UBERON:0002028!1.57e-07!12;UBERON:0007277!1.57e-07!12;UBERON:0007190!3.60e-07!1;UBERON:0001882!5.14e-07!1;UBERON:0005403!5.14e-07!1;UBERON:0003112!5.45e-07!1;UBERON:0000032!5.45e-07!1;UBERON:0005253!5.45e-07!1;UBERON:0003128!5.45e-07!1;UBERON:0002241!5.45e-07!1;UBERON:0001703!5.45e-07!1;UBERON:0004761!5.45e-07!1;UBERON:0009617!5.45e-07!1;UBERON:0004732!5.86e-07!13;UBERON:0002581!6.88e-07!1;UBERON:0002902!8.67e-07!1;UBERON:0009899!8.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;2.38e-27;5!UBERON:0001950;1.23e-25;20!UBERON:0002619;1.79e-23;22!UBERON:0000956;7.53e-21;25!UBERON:0000203;7.53e-21;25!UBERON:0002791;3.95e-16;32!UBERON:0001869;6.56e-16;32!UBERON:0003528;6.85e-14;34!UBERON:0002020;6.85e-14;34!UBERON:0001893;1.19e-13;34!UBERON:0002780;1.34e-12;41!UBERON:0001890;1.34e-12;41!UBERON:0000922;1.55e-12;49!UBERON:0002114;2.19e-12;2!UBERON:0001016;3.25e-08;83!UBERON:0002108;5.92e-08;4!UBERON:0001872;5.92e-08;5!UBERON:0000073;1.35e-07;53!UBERON:0002616;1.35e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.08e-27,5;UBERON:0001950,1.19e-25,20;UBERON:0002619,1.74e-23,22;UBERON:0000956,7.34e-21,25;UBERON:0000203,7.34e-21,25;UBERON:0002791,1.39e-16,32;UBERON:0001869,1.39e-16,32;UBERON:0003528,1.13e-15,34;UBERON:0002020,1.13e-15,34;UBERON:0001893,1.13e-15,34;UBERON:0002780,3.65e-13,41;UBERON:0001890,3.65e-13,41;UBERON:0003080,3.65e-13,41;UBERON:0006240,3.65e-13,41;UBERON:0002114,2.31e-12,2;UBERON:0001017,2.13e-10,81;UBERON:0000073,2.28e-10,53;UBERON:0002616,2.28e-10,53;UBERON:0001049,7.51e-10,56;UBERON:0005068,7.51e-10,56;UBERON:0006241,7.51e-10,56;UBERON:0007135,7.51e-10,56;UBERON:0001016,2.02e-09,89;UBERON:0003056,4.24e-09,61;UBERON:0000955,4.07e-08,68;UBERON:0006238,4.07e-08,68;UBERON:0001872,5.73e-08,5;UBERON:0002108,6.13e-08,4;UBERON:0003075,6.43e-07,82;UBERON:0007284,6.43e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500763722825999,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.159633859057151,0.41023272848151,8.82250936776013,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.620060389503552,0.0634158101939068,3.82882366312754,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,3.49080552272302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500763722825999,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.159633859057151,0.41023272848151,8.82250936776013,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.620060389503552,0.0634158101939068,3.82882366312754,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,3.49080552272302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@MGAT4C | |||
}} | }} |
Latest revision as of 04:51, 25 September 2015
Short description: | p10@MGAT4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MGAT4C_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 139bp_to_NM_013244, uc001taj.3, uc001tak.3, uc001tal.3_5end |
EntrezGene: | MGAT4C |
HGNC: | 30871 |
UniProt: | Q9UBM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.08e-27 | 5 |
neocortex | 1.19e-25 | 20 |
regional part of cerebral cortex | 1.74e-23 | 22 |
cerebral cortex | 7.34e-21 | 25 |
pallium | 7.34e-21 | 25 |
regional part of telencephalon | 1.39e-16 | 32 |
cerebral hemisphere | 1.39e-16 | 32 |
brain grey matter | 1.13e-15 | 34 |
gray matter | 1.13e-15 | 34 |
telencephalon | 1.13e-15 | 34 |
regional part of forebrain | 3.65e-13 | 41 |
forebrain | 3.65e-13 | 41 |
anterior neural tube | 3.65e-13 | 41 |
future forebrain | 3.65e-13 | 41 |
duodenum | 2.31e-12 | 2 |
central nervous system | 2.13e-10 | 81 |
regional part of nervous system | 2.28e-10 | 53 |
regional part of brain | 2.28e-10 | 53 |
neural tube | 7.51e-10 | 56 |
neural rod | 7.51e-10 | 56 |
future spinal cord | 7.51e-10 | 56 |
neural keel | 7.51e-10 | 56 |
nervous system | 2.02e-09 | 89 |
pre-chordal neural plate | 4.24e-09 | 61 |
brain | 4.07e-08 | 68 |
future brain | 4.07e-08 | 68 |
parietal lobe | 5.73e-08 | 5 |
small intestine | 6.13e-08 | 4 |
neural plate | 6.43e-07 | 82 |
presumptive neural plate | 6.43e-07 | 82 |