FFCP PHASE1:Hg19::chr3:143690941..143690986,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:143690941..143690986,+ to FFCP PHASE1:Hg19::chr3:143690941..143690986,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=205428 | |EntrezGene=205428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28490 | |HGNC=28490 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NDZ4,B3KTD4 | |UniProt=Q8NDZ4,B3KTD4 | ||
|association_with_transcript=301bp_to_ENST00000315691,NM_173552,uc003evo.2_5end | |||
|cluster_id=chr3:143690941..143690986,+ | |||
|description=CAGE_peak_2_at_C3orf58_5end | |||
|id=chr3:143690941..143690986,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-11!115;UBERON:0002616!8.38e-11!59;UBERON:0001049!1.77e-10!57;UBERON:0005068!1.77e-10!57;UBERON:0006241!1.77e-10!57;UBERON:0007135!1.77e-10!57;UBERON:0001017!1.79e-10!82;UBERON:0005743!5.13e-10!86;UBERON:0001893!5.93e-10!34;UBERON:0001950!7.32e-10!20;UBERON:0003080!7.92e-10!42;UBERON:0002780!8.77e-10!41;UBERON:0001890!8.77e-10!41;UBERON:0006240!8.77e-10!41;UBERON:0002791!1.71e-09!33;UBERON:0002619!1.77e-09!22;UBERON:0000955!3.49e-09!69;UBERON:0006238!3.49e-09!69;UBERON:0001869!4.63e-09!32;UBERON:0002020!8.50e-09!34;UBERON:0003528!8.50e-09!34;UBERON:0000073!1.11e-08!94;UBERON:0001016!1.11e-08!94;UBERON:0000956!1.22e-08!25;UBERON:0000203!1.22e-08!25;UBERON:0003075!8.77e-08!86;UBERON:0007284!8.77e-08!86;UBERON:0003056!2.88e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.43e-09;20!UBERON:0002619;7.81e-09;22!UBERON:0001893;2.72e-08;34!UBERON:0000956;3.46e-08;25!UBERON:0000203;3.46e-08;25!UBERON:0001869;8.20e-08;32!UBERON:0002791;1.78e-07;32!UBERON:0002780;7.58e-07;41!UBERON:0001890;7.58e-07;41!UBERON:0003528;8.29e-07;34!UBERON:0002020;8.29e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.18e-11,114;UBERON:0001017,8.72e-11,81;UBERON:0000073,1.18e-10,53;UBERON:0002616,1.18e-10,53;UBERON:0001049,1.52e-10,56;UBERON:0005068,1.52e-10,56;UBERON:0006241,1.52e-10,56;UBERON:0007135,1.52e-10,56;UBERON:0001893,4.07e-10,34;UBERON:0001950,4.78e-10,20;UBERON:0002780,6.90e-10,41;UBERON:0001890,6.90e-10,41;UBERON:0003080,6.90e-10,41;UBERON:0006240,6.90e-10,41;UBERON:0002619,1.18e-09,22;UBERON:0000955,2.40e-09,68;UBERON:0006238,2.40e-09,68;UBERON:0001016,3.15e-09,89;UBERON:0001869,3.32e-09,32;UBERON:0002791,3.86e-09,32;UBERON:0003528,6.17e-09,34;UBERON:0002020,6.17e-09,34;UBERON:0000956,8.46e-09,25;UBERON:0000203,8.46e-09,25;UBERON:0003075,1.96e-08,82;UBERON:0007284,1.96e-08,82;UBERON:0003056,8.81e-08,61;UBERON:0002346,7.46e-07,86 | |||
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| ||
|short_description=p2@C3orf58 | |||
}} | }} |
Latest revision as of 05:26, 25 September 2015
Short description: | p2@C3orf58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C3orf58_5end |
Coexpression cluster: | NA |
Association with transcript: | 301bp_to_ENST00000315691, NM_173552, uc003evo.2_5end |
EntrezGene: | C3orf58 |
HGNC: | 28490 |
UniProt: | Q8NDZ4B3KTD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.18e-11 | 114 |
central nervous system | 8.72e-11 | 81 |
regional part of nervous system | 1.18e-10 | 53 |
regional part of brain | 1.18e-10 | 53 |
neural tube | 1.52e-10 | 56 |
neural rod | 1.52e-10 | 56 |
future spinal cord | 1.52e-10 | 56 |
neural keel | 1.52e-10 | 56 |
telencephalon | 4.07e-10 | 34 |
neocortex | 4.78e-10 | 20 |
regional part of forebrain | 6.90e-10 | 41 |
forebrain | 6.90e-10 | 41 |
anterior neural tube | 6.90e-10 | 41 |
future forebrain | 6.90e-10 | 41 |
regional part of cerebral cortex | 1.18e-09 | 22 |
brain | 2.40e-09 | 68 |
future brain | 2.40e-09 | 68 |
nervous system | 3.15e-09 | 89 |
cerebral hemisphere | 3.32e-09 | 32 |
regional part of telencephalon | 3.86e-09 | 32 |
brain grey matter | 6.17e-09 | 34 |
gray matter | 6.17e-09 | 34 |
cerebral cortex | 8.46e-09 | 25 |
pallium | 8.46e-09 | 25 |
neural plate | 1.96e-08 | 82 |
presumptive neural plate | 1.96e-08 | 82 |
pre-chordal neural plate | 8.81e-08 | 61 |
neurectoderm | 7.46e-07 | 86 |